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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0524000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:26046795:26049663:-1 gene:Os08g0524000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal recognition particle receptor beta subunit. (Os08t0524000-01)
Sequence

ATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGG
CAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTG
CTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTC
AGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGA
ACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGG
AGAGGCAAAGTAAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCC
AAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGAT
TTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACT
GTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCT
CACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCA
AGGAACGCCATATCATCTGCTGACATCACTGATGAAGTCAAGCTTGGGAACCCTGGAGAA
GCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCTGACC
GGTAATGTTTCAGCGGTTGAGGAGTTCATTCGTGAGTATGTGAAAGCTTAG

Peptide Sequence

PEP ID

Os08t0524000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:26046795:26049663:-1 gene:Os08g0524000 transcript:Os08t0524000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal recognition particle receptor beta subunit. (Os08t0524000-01)
Sequence

MDEWVRQAEVWVGQAERWIRQQPPEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGL
SGSGKTILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKP
KLDEVLPQAAGIVYVVDAQDFLSTMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTA
HSKEFIKKQLEKELNKLRESRNAISSADITDEVKLGNPGEAFNFSQCQNKVTVTEGAGLT
GNVSAVEEFIREYVKA

Transcript Sequence

Transcript ID

Os08t0524000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26046795:26049663:-1 gene:Os08g0524000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal recognition particle receptor beta subunit. (Os08t0524000-01)
Sequence

TCCTGCTCGGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGGCCACCTCCGCG
GCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGAGAGGGAGGGTG
TAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGGAT
GGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCA
GCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCT
GGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAG
TGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAAC
TGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAG
AGGCAAAGTAAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAA
ACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTT
CTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGT
AGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCA
CTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAG
GAACGCCATATCATCTGCTGACATCACTGATGAAGTCAAGCTTGGGAACCCTGGAGAAGC
ATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCTGACCGG
TAATGTTTCAGCGGTTGAGGAGTTCATTCGTGAGTATGTGAAAGCTTAGGCCTTAGAGTT
GTCGGACCTTTACAGAATAGAGTTTGTATTCGTTCAAAATTGTCATCTAAGCGGAGACTG
ATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATT
CATGCGTGTGAGAAATTTCAACATTTTCTTGAAAGGAAAGCATCGGACATTCAGTTG