Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0521800-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25952986:25954735:-1 gene:Os08g0521800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-01);Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-02)
Sequence	ATGAGGCTCGTGGCTGCCAAACCTTGCTGCCTCTTCCGAATCTCAAGCGTCGCCGCCGTT GCAGCCGGTCGCCGCCGGCCATGGCGAGCCGCGGCGGCGAGCGGCAATGCGCACGCCGAA GCCGAAGGCGATGAGGACGGCCAATCGCTGTCGGCGAGGGCGAGGGGCAGGCGGGCGCGG CTGTCGGCGAGGCGGCGGGAGAGGATCGTGGTGGTGGAGGGCGGCGGCGTTGGGGGCATC GGCGAGTTCCTGCGTCAGCCCGCCGGCGTGGAGTCGCTGCTGAACACGAGGGCGCTGCAG AGCTTCGCGGCGGTGGACGAGGCGCCGGGGGCGAACACGTTCCGGTGCACGCTGCAGAGC ATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGTCCTCGACCTCCGCGTCGCCCCGACATGC CACGACTGCACCGTCGAGATGCTCTCCTGCAGGTTTGAGGGTTCAGGCTCAGTTGAGCAG CAGAATGAGCTCTTTTCAGCTTTTATGAGCAACCATATAACTTGGAAAGACGATGGTGAG GAACCATGCTTGGACATTGATGTCAATTTGGAGGTCACTCTGGAGGTTTACACGAAGCCA TTCAGCATGCTTCCATTGTCAGCAGTGGAGACACCAGGCAACCTGCTGATGCAAGGCCTC CTGGACAGGCTCGTGCCCTTGCTGGGGGAGCAGCTGCTGAGAGACTACCATTCGTGGGTT CAGCTTCAGCAGCAGCAGCCTGAAATTTCCTCATTAGAAACTGCTGAAATCGATGCTTCA TAG

Peptide Sequence

PEP ID	Os08t0521800-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25952986:25954735:-1 gene:Os08g0521800 transcript:Os08t0521800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-01);Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-02)
Sequence	MRLVAAKPCCLFRISSVAAVAAGRRRPWRAAAASGNAHAEAEGDEDGQSLSARARGRRAR LSARRRERIVVVEGGGVGGIGEFLRQPAGVESLLNTRALQSFAAVDEAPGANTFRCTLQS IGFLGFQVAPVLDLRVAPTCHDCTVEMLSCRFEGSGSVEQQNELFSAFMSNHITWKDDGE EPCLDIDVNLEVTLEVYTKPFSMLPLSAVETPGNLLMQGLLDRLVPLLGEQLLRDYHSWV QLQQQQPEISSLETAEIDAS

Transcript Sequence

Transcript ID	Os08t0521800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25952986:25954735:-1 gene:Os08g0521800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-01);Protein of unknown function DUF1997 domain containing protein. (Os08t0521800-02)
Sequence	AGTGGCTCGCCGTCGCCGCTGCTCCTCTCCAACTCCAACCTCGCATCACTCCATGCGCGA GCTCGAGCTCAGCTGAGTGGACGATGGAATGAGGCTCGTGGCTGCCAAACCTTGCTGCCT CTTCCGAATCTCAAGCGTCGCCGCCGTTGCAGCCGGTCGCCGCCGGCCATGGCGAGCCGC GGCGGCGAGCGGCAATGCGCACGCCGAAGCCGAAGGCGATGAGGACGGCCAATCGCTGTC GGCGAGGGCGAGGGGCAGGCGGGCGCGGCTGTCGGCGAGGCGGCGGGAGAGGATCGTGGT GGTGGAGGGCGGCGGCGTTGGGGGCATCGGCGAGTTCCTGCGTCAGCCCGCCGGCGTGGA GTCGCTGCTGAACACGAGGGCGCTGCAGAGCTTCGCGGCGGTGGACGAGGCGCCGGGGGC GAACACGTTCCGGTGCACGCTGCAGAGCATCGGCTTCCTCGGGTTCCAGGTCGCCCCCGT CCTCGACCTCCGCGTCGCCCCGACATGCCACGACTGCACCGTCGAGATGCTCTCCTGCAG GTTTGAGGGTTCAGGCTCAGTTGAGCAGCAGAATGAGCTCTTTTCAGCTTTTATGAGCAA CCATATAACTTGGAAAGACGATGGTGAGGAACCATGCTTGGACATTGATGTCAATTTGGA GGTCACTCTGGAGGTTTACACGAAGCCATTCAGCATGCTTCCATTGTCAGCAGTGGAGAC ACCAGGCAACCTGCTGATGCAAGGCCTCCTGGACAGGCTCGTGCCCTTGCTGGGGGAGCA GCTGCTGAGAGACTACCATTCGTGGGTTCAGCTTCAGCAGCAGCAGCCTGAAATTTCCTC ATTAGAAACTGCTGAAATCGATGCTTCATAGTCGGATGGCTTCATCGAATTCAGAGATTT TTAGCGAGACGAAAGAATTCTGAGAAAATATGTTGGATGGTTTGGAGAAAAATTGGTTGC CGATGTAACTAAAAATTGCAGTTTGTAATATAGTTCCATTATGACTGCTTCAGTG