Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0521000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:25909390:25910662:1 gene:Os08g0521000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0521000-01)
Sequence

ATGGCGTGGAAGGACAGCTACTTGGACCTCGTGCTGATCCCGGCGGGGATCGTGTTCCCG
ATCGTCTACCACGTCTGGCTGTGGCACGTCGTCCGCCGCCGCCCGCTCTCCTCCACCGTC
GGCATTAACACCGCCACCCGCCGCCTCTGGGTCTTGGGCATGATGAAGGACAACGAGAAG
AAGGCGGTGCTGGTGGTGCAGTCGATGAGGAACGTGATAATGGGGTCGACGCTGATGGCG
ACGACGGCCATCCTCTTCTGCACCGGCGTCGCCGCCATCCTCAGCAGCACGTACACCGTC
AAGAAGCCGCTCAGCGACGCCGTGTTCGGCGCCCACGGCGAGTACATGATGGCGCTCAAG
TACGTCACCCTCCTCCTCGCCTTCCTCCTCTCCTTCCTCTCCCACACCACCGCCATCTGC
ACCCTCAACCAGGCCACCTTCCTCCTCAACACCCTCTCTTCCTCCTCCTCCTTCGCCGCC
GACATCGCCGGGCTGCCGGTGACCAAGGACTACGTCGCCGACGTGCTCGAGAGAGGATTC
CTCCTCAACCTCGTCGGAAACCGGCTGTTCTACGCCGGCGTGCCGCTTCTCCTGTGGATC
TTCGGCCCGGTCTTGGCTTGCCTCTGCTCCGTCGTCATGATCCCGATACTGCACAGCATC
GACGTGGTTTACGTCGATGGGAGCAGCAAGGGCGAGGCCAACGCCAGAGTGGAGATGGTG
TACGAGAGCGATGAGAGCGTCATGCAAGTTTGA

Peptide Sequence

PEP ID

Os08t0521000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:25909390:25910662:1 gene:Os08g0521000 transcript:Os08t0521000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0521000-01)
Sequence

MAWKDSYLDLVLIPAGIVFPIVYHVWLWHVVRRRPLSSTVGINTATRRLWVLGMMKDNEK
KAVLVVQSMRNVIMGSTLMATTAILFCTGVAAILSSTYTVKKPLSDAVFGAHGEYMMALK
YVTLLLAFLLSFLSHTTAICTLNQATFLLNTLSSSSSFAADIAGLPVTKDYVADVLERGF
LLNLVGNRLFYAGVPLLLWIFGPVLACLCSVVMIPILHSIDVVYVDGSSKGEANARVEMV
YESDESVMQV

Transcript Sequence

Transcript ID

Os08t0521000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:25909390:25910662:1 gene:Os08g0521000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0521000-01)
Sequence

AAGACAGTGCAGACGCCGACCACCTCCTCCTCTCTAGCTTCTCCGACGACGCACTCCGGC
GATCGAGCGGCCGGCAAGGAAGAAGAAGAAGAGAGAGCAGGTTGGAGAGGTCGTCCATGG
CGTGGAAGGACAGCTACTTGGACCTCGTGCTGATCCCGGCGGGGATCGTGTTCCCGATCG
TCTACCACGTCTGGCTGTGGCACGTCGTCCGCCGCCGCCCGCTCTCCTCCACCGTCGGCA
TTAACACCGCCACCCGCCGCCTCTGGGTCTTGGGCATGATGAAGGACAACGAGAAGAAGG
CGGTGCTGGTGGTGCAGTCGATGAGGAACGTGATAATGGGGTCGACGCTGATGGCGACGA
CGGCCATCCTCTTCTGCACCGGCGTCGCCGCCATCCTCAGCAGCACGTACACCGTCAAGA
AGCCGCTCAGCGACGCCGTGTTCGGCGCCCACGGCGAGTACATGATGGCGCTCAAGTACG
TCACCCTCCTCCTCGCCTTCCTCCTCTCCTTCCTCTCCCACACCACCGCCATCTGCACCC
TCAACCAGGCCACCTTCCTCCTCAACACCCTCTCTTCCTCCTCCTCCTTCGCCGCCGACA
TCGCCGGGCTGCCGGTGACCAAGGACTACGTCGCCGACGTGCTCGAGAGAGGATTCCTCC
TCAACCTCGTCGGAAACCGGCTGTTCTACGCCGGCGTGCCGCTTCTCCTGTGGATCTTCG
GCCCGGTCTTGGCTTGCCTCTGCTCCGTCGTCATGATCCCGATACTGCACAGCATCGACG
TGGTTTACGTCGATGGGAGCAGCAAGGGCGAGGCCAACGCCAGAGTGGAGATGGTGTACG
AGAGCGATGAGAGCGTCATGCAAGTTTGACCAATTTCGGACACGAGTCGGACTCTATAAC
CTGCCTACCCTCACGGAGAATATGTGGTGGTGCTCTCGTCTCGTCCTTCAAACTCGATCT
TGAAGAAAAATGCGGGCAATTCTTGATCCAACAGTGACTGCACCTGTGTTGTGTGTGTCA
TGTTTGTGGCTTGGATTGTTTTGAGTATTCTTATTCAAGACATGTTTAGCATGGCACGGC
CGGGAGAGTACTTGGTGCTGTAACAGAGACTCACTGATCGGTCAACTGTTAACGCACAGC
AATGTACTGGTTACAACTGCTGTAATCTGTCAGAATAAGATGTTCTCCCCCATTGATTC