Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0520100-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25854563:25857132:1 gene:Os08g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase domain containing protein. (Os08t0520100-01);Similar to pseudouridine synthase family protein. (Os08t0520100-02)
Sequence	AAGAGCCAGAAGCATCATCTCAAGAAGATCAAGCATAATGATGTGATGGAGCCTGGCATG AGAATTCACCTTCCTGTGTCAGTGGCAGAGGGCGAGATTAAGAAGCGGTATGAGACCATT CCAACTGCCACATTGCATCCCAATAAAGATGAGATTGAATACTTGAGAAGGCTTGTCATA CACAAGGATTCTGCCATACTTGTACTTAACAAGCCCCCAAAAGTGCCCATGAAGGGAAAT TTGCCAGTGCATAACAGCATGGATGTGCTTGCAGCAGCAGCTCTGTCATATGGAAATGAA GAAGGTCCAAAATTGGTTCATCGACTGGACAGAGAAAGTAGTGGTTTGCTGTTGTTCGGG AGAACAAAAGAAAGCTTTACTCGATTGCATTGGCTTTTCACTAGCGTCAATTTAGCAAAA ACGAATTCTCAGGTATGGAATGCTGCCTGTGAAGCATACATGCAGAGGTATTGGGCATTG GTGATTGGGACCCCTAAAGAAAGAGAAGGGATTATTTCTGCACCTCTTTCAAAGGTACTT CTTGATGATGGGAAAGCCGAGCGTGTCATTCTGGCACATCCATCTGGCATAGATGGTGCA CAAGAAGCTGTAACAGCATATCGGGTGATGGGACCAACCATTCATGGGTGCTCATGGATT GAGCTACGCCCATTGACAGGCCGAAAGCATCAGCTCCGAGTACATTGTGCAGAAGCTCTA GGCACACCCATTGTCGGAGACTACAAGTACGGGTGGTTTGTGCACCAAAGGTGGAAGCAG AATCCCCAACCAGACTTTGAACCGTTTACTGGGGAGCCATACAAGCTGAGGCGCCCAGAA GGCTTGGAAATCCAGAAGGGCAGTGTTCTCTCTAAAGTCCCTCTGCTGCACCTGCATTGC CGGGAAATGGTCATCCCCAACATCGCGAAATTCCTGAGCAGCAATGGAGAATGGCATGAA AATGGTGCTCCATGGTCCAAGGAGAAGCCCAATCTCCTCAGGTTCATCGCACCGATGCCT GCACATATGAAAATTAGCTGGAATATCATGTCCTCATATCTGGTGTAA

Peptide Sequence

PEP ID	Os08t0520100-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25854563:25857132:1 gene:Os08g0520100 transcript:Os08t0520100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase domain containing protein. (Os08t0520100-01);Similar to pseudouridine synthase family protein. (Os08t0520100-02)
Sequence	KSQKHHLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVI HKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFG RTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVL LDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEAL GTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHC REMVIPNIAKFLSSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV

Transcript Sequence

Transcript ID	Os08t0520100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25854563:25857132:1 gene:Os08g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase domain containing protein. (Os08t0520100-01);Similar to pseudouridine synthase family protein. (Os08t0520100-02)
Sequence	TTAAGAGCCAGAAGCATCATCTCAAGAAGATCAAGCATAATGATGTGATGGAGCCTGGCA TGAGAATTCACCTTCCTGTGTCAGTGGCAGAGGGCGAGATTAAGAAGCGGTATGAGACCA TTCCAACTGCCACATTGCATCCCAATAAAGATGAGATTGAATACTTGAGAAGGCTTGTCA TACACAAGGATTCTGCCATACTTGTACTTAACAAGCCCCCAAAAGTGCCCATGAAGGGAA ATTTGCCAGTGCATAACAGCATGGATGTGCTTGCAGCAGCAGCTCTGTCATATGGAAATG AAGAAGGTCCAAAATTGGTTCATCGACTGGACAGAGAAAGTAGTGGTTTGCTGTTGTTCG GGAGAACAAAAGAAAGCTTTACTCGATTGCATTGGCTTTTCACTAGCGTCAATTTAGCAA AAACGAATTCTCAGGTATGGAATGCTGCCTGTGAAGCATACATGCAGAGGTATTGGGCAT TGGTGATTGGGACCCCTAAAGAAAGAGAAGGGATTATTTCTGCACCTCTTTCAAAGGTAC TTCTTGATGATGGGAAAGCCGAGCGTGTCATTCTGGCACATCCATCTGGCATAGATGGTG CACAAGAAGCTGTAACAGCATATCGGGTGATGGGACCAACCATTCATGGGTGCTCATGGA TTGAGCTACGCCCATTGACAGGCCGAAAGCATCAGCTCCGAGTACATTGTGCAGAAGCTC TAGGCACACCCATTGTCGGAGACTACAAGTACGGGTGGTTTGTGCACCAAAGGTGGAAGC AGAATCCCCAACCAGACTTTGAACCGTTTACTGGGGAGCCATACAAGCTGAGGCGCCCAG AAGGCTTGGAAATCCAGAAGGGCAGTGTTCTCTCTAAAGTCCCTCTGCTGCACCTGCATT GCCGGGAAATGGTCATCCCCAACATCGCGAAATTCCTGAGCAGCAATGGAGAATGGCATG AAAATGGTGCTCCATGGTCCAAGGAGAAGCCCAATCTCCTCAGGTTCATCGCACCGATGC CTGCACATATGAAAATTAGCTGGAATATCATGTCCTCATATCTGGTGTAAGAGCATCTCC ATGTGCCATTGTTGGTAACATCAAGTTTCATTCCATGTAGTTTTACTGAGAAGCAGCTAG GCTTCTAGTTCATTATTTTCTAGATTCTATAGCTACATCTTCTCACAGTCTGGGTGAGAA TCTGTTCTGCACTGCTTCGGGAGCCTAAGATTTTAGGATATAAGCTGCCGCTGCTAGAAG CTCAGCTCCCCCGAATAGTGCCATAGCTGTTTTTTTCAGGAATGCCAGATTGTAGCATCT GAACCATTGCAAAAGAAACAGTTGGTGTGAATATAGATCAATTTTCTAAGAGTATACATC CTACCAAAGTTTTAAATCTTTGTTTCTTTTTTGTAAGCATGATGTAATTCTGAACAATAA TTACTGTACGTTGCAGCATTTTACTACTAATGAAATGCCACTGCTAGTCTGCTACT