Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0518100-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25715793:25717475:1 gene:Os08g0518100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MICROTUBULE-ASSOCIATED PROTEIN description:RabGAP/TBC domain containing protein. (Os08t0518100-01);Hypothetical conserved gene. (Os08t0518100-02)
Sequence	TTATTAAATTTTCCAACGAATATTGATGTGCAGAAGCTAATTGAGAAAGCCAACTCCCTA CAGTCTATTGCAATTGATGCGAACACTTCATCCTCATCTTTCCTTTTAAAGAGGGATAGC TATGAGTTTGACAGAGTTCACAGCAATCTCTCTTCTTCAACTCCTCCGAGAACTCCATTG CATCCTGTTTCTGAGAGTTACTGGGAAGAGAAGTGGAGGAATGTGCACAAGGACGGAACA ACCCCCAAGGAGGTTGAGAGGGGCAATTCTTTTAGTAAACAATTAAAGAAATCTTTGACC CAGAAGCTTGGTTTATCTAGGACAGAGTCAGATCCTTCTCCAGTGAAGGTCCTCAGTGTG AGTAGTAATGATACTCGGAATTCAGTAAGACGTTGCCTTCTGAATACTTTATCAGATGAT TTGGATTGTTCTAATGAACTTGCCGGGAAAACTCAGGAAGACGAATTCCCTATCATCTCA GTTCACAGGGAGCATCCTCTGAGCTCTGCAGAGCCTTCCAAGTTAAAGGCAGCTGGTGAA AATGTAACTGTGAGCGCATCATGTGTGGCAAAACTCAGCCCTCTAAAAAAATCTGTGGTT GAGCCAGCTAATGAGAACGCAACACAGGGGACAAAGTGTGTACCAGAAGCTTGTTCCAGC GGTGAGAACTCTCCAGTGTTCTATGCAGCCAGAGCCAGTGCTGGTAATGAACCTTTGAAT GGCCAGGACACGGATTCTGAGAGTAGCAGTGTTACCTCAAATTCCTTTGCTGGTGACCAT GATAGGGATGAAATTCTGAAAGATGAGCCATCCAGCTCTAATGATGATAACAAAACCATC CAAGATTCAGAAGCAGCATCTTCTGATAAAAGTCCAGACCGAAATGGAACCTCTGAGAGG GCTGTCGTTTCTAATGAAAGAAAGCCATTCATTAGTAAATTCCAGTGGCTCTTGAAGTTG GGAAGACCTTCGGTTGAAGGCAACATGGAGAAGAGTAGTGGAGAGACATCAGCTGATAAA CAAGACGGGGACACATCCTGTTCTCCTTCTGATGGGAATTCAAATAACTCCCGTGGTAGC GTAAAGTTGGCTTCTGGTGATAAAAAGGTCATGGGCAGCCTAAAGAATCTTGGACAAAAC ATGCTTGAAAATATCCAGGTGATTGAGTCGGCATTTCAGCAAGACCGTGGTCAGCCTGGC CCTGTGGAGAACTTCTCAAACAACATTCTTGGAGGCAAAGGACAGGTCACTGCAATGGCT GCTCTGACGGAGCTTCGCAAGATCAGCAATCTGCTGAGCGAGATGTAA

Peptide Sequence

PEP ID	Os08t0518100-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25715793:25717475:1 gene:Os08g0518100 transcript:Os08t0518100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MICROTUBULE-ASSOCIATED PROTEIN description:RabGAP/TBC domain containing protein. (Os08t0518100-01);Hypothetical conserved gene. (Os08t0518100-02)
Sequence	LLNFPTNIDVQKLIEKANSLQSIAIDANTSSSSFLLKRDSYEFDRVHSNLSSSTPPRTPL HPVSESYWEEKWRNVHKDGTTPKEVERGNSFSKQLKKSLTQKLGLSRTESDPSPVKVLSV SSNDTRNSVRRCLLNTLSDDLDCSNELAGKTQEDEFPIISVHREHPLSSAEPSKLKAAGE NVTVSASCVAKLSPLKKSVVEPANENATQGTKCVPEACSSGENSPVFYAARASAGNEPLN GQDTDSESSSVTSNSFAGDHDRDEILKDEPSSSNDDNKTIQDSEAASSDKSPDRNGTSER AVVSNERKPFISKFQWLLKLGRPSVEGNMEKSSGETSADKQDGDTSCSPSDGNSNNSRGS VKLASGDKKVMGSLKNLGQNMLENIQVIESAFQQDRGQPGPVENFSNNILGGKGQVTAMA ALTELRKISNLLSEM

Transcript Sequence

Transcript ID	Os08t0518100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25715793:25717475:1 gene:Os08g0518100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MICROTUBULE-ASSOCIATED PROTEIN description:RabGAP/TBC domain containing protein. (Os08t0518100-01);Hypothetical conserved gene. (Os08t0518100-02)
Sequence	TTATTAAATTTTCCAACGAATATTGATGTGCAGAAGCTAATTGAGAAAGCCAACTCCCTA CAGTCTATTGCAATTGATGCGAACACTTCATCCTCATCTTTCCTTTTAAAGAGGGATAGC TATGAGTTTGACAGAGTTCACAGCAATCTCTCTTCTTCAACTCCTCCGAGAACTCCATTG CATCCTGTTTCTGAGAGTTACTGGGAAGAGAAGTGGAGGAATGTGCACAAGGACGGAACA ACCCCCAAGGAGGTTGAGAGGGGCAATTCTTTTAGTAAACAATTAAAGAAATCTTTGACC CAGAAGCTTGGTTTATCTAGGACAGAGTCAGATCCTTCTCCAGTGAAGGTCCTCAGTGTG AGTAGTAATGATACTCGGAATTCAGTAAGACGTTGCCTTCTGAATACTTTATCAGATGAT TTGGATTGTTCTAATGAACTTGCCGGGAAAACTCAGGAAGACGAATTCCCTATCATCTCA GTTCACAGGGAGCATCCTCTGAGCTCTGCAGAGCCTTCCAAGTTAAAGGCAGCTGGTGAA AATGTAACTGTGAGCGCATCATGTGTGGCAAAACTCAGCCCTCTAAAAAAATCTGTGGTT GAGCCAGCTAATGAGAACGCAACACAGGGGACAAAGTGTGTACCAGAAGCTTGTTCCAGC GGTGAGAACTCTCCAGTGTTCTATGCAGCCAGAGCCAGTGCTGGTAATGAACCTTTGAAT GGCCAGGACACGGATTCTGAGAGTAGCAGTGTTACCTCAAATTCCTTTGCTGGTGACCAT GATAGGGATGAAATTCTGAAAGATGAGCCATCCAGCTCTAATGATGATAACAAAACCATC CAAGATTCAGAAGCAGCATCTTCTGATAAAAGTCCAGACCGAAATGGAACCTCTGAGAGG GCTGTCGTTTCTAATGAAAGAAAGCCATTCATTAGTAAATTCCAGTGGCTCTTGAAGTTG GGAAGACCTTCGGTTGAAGGCAACATGGAGAAGAGTAGTGGAGAGACATCAGCTGATAAA CAAGACGGGGACACATCCTGTTCTCCTTCTGATGGGAATTCAAATAACTCCCGTGGTAGC GTAAAGTTGGCTTCTGGTGATAAAAAGGTCATGGGCAGCCTAAAGAATCTTGGACAAAAC ATGCTTGAAAATATCCAGGTGATTGAGTCGGCATTTCAGCAAGACCGTGGTCAGCCTGGC CCTGTGGAGAACTTCTCAAACAACATTCTTGGAGGCAAAGGACAGGTCACTGCAATGGCT GCTCTGACGGAGCTTCGCAAGATCAGCAATCTGCTGAGCGAGATGTAACAGTGTAAGATG TATCGCCCATTCTTTCCCAGCTTTCTAGCTCAGCTAAGGCCTGGTAGTAATAAGTCAGGT ACCTAGGTCTTTTTCATTCAGCAGTGCTTGGCACTGCTTGAATATGTATATATAGATTCG ATTCGATTCCATTCCATTGAGTAAATCATGTAAGCATTGTACAAGGATCACCCGTGGATT TACCTGGCGCGTGATGAGGGAGTAGTTCTCTCCGGCATTAGGAAGCTATCTAATGATGGA TGAAATTTTGTAAGATAAACTTTTTAAGGAAGAATAAGCAGAATATGTTGC