Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0517200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25652085:25658556:-1 gene:Os08g0517200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 2 description:Similar to autoinhibited calcium ATPase. (Os08t0517200-01);Similar to Cation transporting ATPase, C-terminal. (Os08t0517200-02);Similar to P-type ATPase (Fragment). (Os08t0517200-03)
Sequence	GGAATGGATTTCAATGATGCACGGTCAAAATCTCAAATTCTTCATGTCTTTCCATTTAAT TCGGAGAAGAAGCGTGGTGGGGTTGCAGTACAGTCAGATGCTGGTGTTCATGTCCATTGG AAAGGTGCAGCTGAGCTTGTGTTATCATCTTGCAAAAGCTGGCTTGCCCTGGATGGTTCA GTTCAGCCCATGAGTGCTGAGAAGTATAATGAATGCAAGAAATCAATTGAAGACATGGCA ACGAGTTCATTACGATGCGTTGCTTTTGCATATTGTCCTTGTGAAATTGAAAGAATCCCA AAGGAAGACATAGCTGATTGGAAGTTACCTGAGGATGACCTGACTCTGCTTTGTATTGTG GGTATAAAGGATCCTTGTCGCCCAGGAGTGAAGAGTGCTGTACAATTATGCACCAATGCT GGTGTAAAGGTGCGCATGGTCACTGGAGATAACATTGAAACAGCTAAAGCCATAGCTTTG GAGTGTGGAATATTAGATGCAAATGGAGCTTTTGTGGAGCCATTTGTAATAGAGGGAAAA GTGTTTCGCGAGATGTCTGAAGCTGCTAGAGGAGATATTGTTGACAAAATAACAGTGATG GGAAGATCATCTCCAAATGACAAACTTTTGCTTGTCCAAGCTTTGAAAAGAAAGGGTCAT GTTGTGGCTGTTACTGGTGATGGCACAAATGATGCTCCTGCATTGCATGAGGCCGATATA GGTCTCTCAATGGGCATTTCAGGGACAGAAGTTGCCAAAGAAAGTTCTGACATTATAATC TTGGATGACAACTTCACATCAGTTGTGAAGGTTGTTCGCTGGGGAAGGTCTGTCTATGCA AATATTCAGAAATTCATCCAGTTTCAGCTTACTGTTAATGTTGCCGCACTCGTGATTAAT GTTGTTGCAGCTGTGTCCTCTGGTGACGTGCCTCTAAATGCTGTTGAGCTTCTCTGGGTA AATCTAATCATGGATACACTGGGAGCTCTGGCTTTAGCAACTGAACCACCGACGGATAAC CTTATGAAGAGACAGCCTGTTGGTCGAAGGGAACCTCTTGTGACTAATATTATGTGGCGA AACTTGTTTGTCCAGGCCATTTACCAAATAGCGATCCTTCTTATCTTTGATTTTTCTGGA AGAAGCATACTGCGGTTACAGAATGATAGTCGGGAGGATGCTGAGAAAACACAAAACACC TTTATCTTCAACACCTTTGTCTTTTGCCAGATCTTCAACGAGTTCAATGCACGCAAGCCC GAGGAGAGGAATGTCTTCAAAGGAATAACGAAAAACCATCTCTTCATGGGAATAATTGCT ATAACTACTGTATTTCAGATACTAATTATTGAGTTCCTGGGAAAGTTCTTCAAAACTGTG AGACTTAATTGGAGATTATGGTTGGTCTCAGTTGCTATTGGCATTATAAGTTGGCCTCTG GCATATCTGGGGAAATTCATTCCTGTGCCTGTAAGACCTCTCCAGGATTATTTCAAGCCT ACTTGTTGGAGAAGAGCTTCACGGCGAGATGAAGAGGAGAGTGGACAGAGCTAA

Peptide Sequence

PEP ID	Os08t0517200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25652085:25658556:-1 gene:Os08g0517200 transcript:Os08t0517200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 2 description:Similar to autoinhibited calcium ATPase. (Os08t0517200-01);Similar to Cation transporting ATPase, C-terminal. (Os08t0517200-02);Similar to P-type ATPase (Fragment). (Os08t0517200-03)
Sequence	GMDFNDARSKSQILHVFPFNSEKKRGGVAVQSDAGVHVHWKGAAELVLSSCKSWLALDGS VQPMSAEKYNECKKSIEDMATSSLRCVAFAYCPCEIERIPKEDIADWKLPEDDLTLLCIV GIKDPCRPGVKSAVQLCTNAGVKVRMVTGDNIETAKAIALECGILDANGAFVEPFVIEGK VFREMSEAARGDIVDKITVMGRSSPNDKLLLVQALKRKGHVVAVTGDGTNDAPALHEADI GLSMGISGTEVAKESSDIIILDDNFTSVVKVVRWGRSVYANIQKFIQFQLTVNVAALVIN VVAAVSSGDVPLNAVELLWVNLIMDTLGALALATEPPTDNLMKRQPVGRREPLVTNIMWR NLFVQAIYQIAILLIFDFSGRSILRLQNDSREDAEKTQNTFIFNTFVFCQIFNEFNARKP EERNVFKGITKNHLFMGIIAITTVFQILIIEFLGKFFKTVRLNWRLWLVSVAIGIISWPL AYLGKFIPVPVRPLQDYFKPTCWRRASRRDEEESGQS

Transcript Sequence

Transcript ID	Os08t0517200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25652085:25658556:-1 gene:Os08g0517200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Functioning in Cesium Over-transport 2 description:Similar to autoinhibited calcium ATPase. (Os08t0517200-01);Similar to Cation transporting ATPase, C-terminal. (Os08t0517200-02);Similar to P-type ATPase (Fragment). (Os08t0517200-03)
Sequence	TAGGAATGGATTTCAATGATGCACGGTCAAAATCTCAAATTCTTCATGTCTTTCCATTTA ATTCGGAGAAGAAGCGTGGTGGGGTTGCAGTACAGTCAGATGCTGGTGTTCATGTCCATT GGAAAGGTGCAGCTGAGCTTGTGTTATCATCTTGCAAAAGCTGGCTTGCCCTGGATGGTT CAGTTCAGCCCATGAGTGCTGAGAAGTATAATGAATGCAAGAAATCAATTGAAGACATGG CAACGAGTTCATTACGATGCGTTGCTTTTGCATATTGTCCTTGTGAAATTGAAAGAATCC CAAAGGAAGACATAGCTGATTGGAAGTTACCTGAGGATGACCTGACTCTGCTTTGTATTG TGGGTATAAAGGATCCTTGTCGCCCAGGAGTGAAGAGTGCTGTACAATTATGCACCAATG CTGGTGTAAAGGTGCGCATGGTCACTGGAGATAACATTGAAACAGCTAAAGCCATAGCTT TGGAGTGTGGAATATTAGATGCAAATGGAGCTTTTGTGGAGCCATTTGTAATAGAGGGAA AAGTGTTTCGCGAGATGTCTGAAGCTGCTAGAGGAGATATTGTTGACAAAATAACAGTGA TGGGAAGATCATCTCCAAATGACAAACTTTTGCTTGTCCAAGCTTTGAAAAGAAAGGGTC ATGTTGTGGCTGTTACTGGTGATGGCACAAATGATGCTCCTGCATTGCATGAGGCCGATA TAGGTCTCTCAATGGGCATTTCAGGGACAGAAGTTGCCAAAGAAAGTTCTGACATTATAA TCTTGGATGACAACTTCACATCAGTTGTGAAGGTTGTTCGCTGGGGAAGGTCTGTCTATG CAAATATTCAGAAATTCATCCAGTTTCAGCTTACTGTTAATGTTGCCGCACTCGTGATTA ATGTTGTTGCAGCTGTGTCCTCTGGTGACGTGCCTCTAAATGCTGTTGAGCTTCTCTGGG TAAATCTAATCATGGATACACTGGGAGCTCTGGCTTTAGCAACTGAACCACCGACGGATA ACCTTATGAAGAGACAGCCTGTTGGTCGAAGGGAACCTCTTGTGACTAATATTATGTGGC GAAACTTGTTTGTCCAGGCCATTTACCAAATAGCGATCCTTCTTATCTTTGATTTTTCTG GAAGAAGCATACTGCGGTTACAGAATGATAGTCGGGAGGATGCTGAGAAAACACAAAACA CCTTTATCTTCAACACCTTTGTCTTTTGCCAGATCTTCAACGAGTTCAATGCACGCAAGC CCGAGGAGAGGAATGTCTTCAAAGGAATAACGAAAAACCATCTCTTCATGGGAATAATTG CTATAACTACTGTATTTCAGATACTAATTATTGAGTTCCTGGGAAAGTTCTTCAAAACTG TGAGACTTAATTGGAGATTATGGTTGGTCTCAGTTGCTATTGGCATTATAAGTTGGCCTC TGGCATATCTGGGGAAATTCATTCCTGTGCCTGTAAGACCTCTCCAGGATTATTTCAAGC CTACTTGTTGGAGAAGAGCTTCACGGCGAGATGAAGAGGAGAGTGGACAGAGCTAAGACC GGCAAATATTCAGTGTAAATATCCAAGGGTCAAAGAAAAGGACAAGATATTGTTTTTGCA GGCAACTCCTGTAGTGGAAGCTTTGCATGCAGCGCCGGGTCAAGTGACACCCTAATCGTT GATATTTGGCTTCACTTGATCGGAGTTAATATAAATCAAATTCTAACTCGGGGAAGCAAT CTTTAACCTCGTGTTATTTAAAGGGGTTCATAAAACTGTACATGTTTTAATATATAGTAG CTGAACTGAACCTGTATCTATGAGTCTACAAGTTTGCTCTAGTTCAGCTGTAGGATTTGA GGCTCACGTACTCGAAGCTCAAAGTCCATCGAGGTTGAGGAACTCGTCGGCCGGATCCAG CAACGGCGGCGGCGACTGCTCCTCCTGCTGCTGCGGCGGCGGCGGCGGCGGCGGCGACGG CAATGGTGGCGGAGGAGGTGGAGGTGGAGGTTGCTGGGAGGAAGCGACGGCGATGGCGAG GTGAGCCTGCGTCCTGGCCAGCTCGCACTGGACGGCTCGGATCTCCTCCTGCAGGCGGTT GATGATCCCGGTGCAGCCGTACACCGGGTCCTGCACCCTCCAGTACGCCTCCATCGCCAT CGTGTTCGCCGCGTTGCCCCTCTCCGCCATCGGCAAGCTCTAGTACGTACAAAAAAAAAG TTCACGAAGATAAATCAGTCATCAATAAAAAGTTAGTTAATATGCTTGAAAATATGTTAT GGGTAAACATAACATGAATCCCTTTAGGTTACTGCATATCCATATAGTCACAGCAAGCTA GTGACATGTGAGTATGAGTTCATATGTTAGTGACTATCCGATATGGATCAGACGTTACCC ACTTTCATCACGACAACTATCTATTCCGAAAT