Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0513300-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25444538:25450058:1 gene:Os08g0513300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-01);Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-02)
Sequence	ATGAGGCGCTTGGTGACGCACCTCCACCGCCTCTCCCACCGCGCCATCCCTTCCCCGCCT CCATCTCGACCCCCAACCACCACTAGCCTCCCCTTCCTCCTCTCCCGCCGCCTCCTCTCC GACGACGCCGCGCCTCCGCCCGCCGCCGACGTCCCAAACAAAGAGCTGAAGCGGCGGTTG GAAACTTACTATGGGGTGGACGATGAGGCAGAACTACCATCTGTCACAGAGGCTGTTCTT GAGCGGAAGCTTGCGGATGTGCACAGCGAGACGGACGATGAACTTATCGAGGAGCTGCGC AGCAAACCACTCCCTGAGGTTCGTGACAGGGATTTTGAGTCCGACTTTGAGGAGATGCAC GATACTGATGAGGAGCTGGACAACTTGTACAACGCCAGACAGTATGTGGAGAAAAAGATC AAGAGTGACGAGTTCTTTAATATGGATGACGACAAGTGGAATAAGATGATCAAGAAGGCT GTGGATAATGGCCACCTCGGTAATATGAACGAATGTGAGAATATTTTGGAGGACATGCTC CACTGGGACAAACTATTACCTGATGAAATTAAAAAGAAGGTGGAGGCCAAATTTAATGAG TTGGGGGACATGTGTGAGAAGGGAGAGCTTGAACCTGAGCAGGCTTATGAATTATTCAAA GAGTTTGAGGATAAGATGGTTTCAGAGTGCACAGAACTAATGGAAGCTGAGAACCCAACT GACGTGGATGAATTTTCTAAAATGGAAAATAAGAGTGTTAAGTTGGACGATCCACCTGGT GAGGGACCTGTTCTAAGGTGGGAGTCACGTATTGTCTTTGCTCCTGGAGGTGATGCATGG CATCCCAAAAACAGGAAAGTTAAACTCAGTGTGACTGTCAAAGAGCTGGGACTTTCACGA CATGCCTTCCGACGTTTACGTGAGGTTGTTGGGAATAGGTACAATTCTGGAAAAGATGAA CTCACAATAACTAGTGAAAGGTTTGAGCATCGGGAAGAGAACAGGAAAGATTGCTTGAGG ACATTGTATGCTGTAGTAGAAGATGCAAACAAGGCCAATAAGTTGGCTGATGATGCTAGA AATGCATATGTTAAAAACAGACTTAAGGCCAATGCTCAATTCATGGAAAGGTTGAAGGTG AAGACACAGAAATTGAGGGTAGCTGCATAA

Peptide Sequence

PEP ID	Os08t0513300-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25444538:25450058:1 gene:Os08g0513300 transcript:Os08t0513300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-01);Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-02)
Sequence	MRRLVTHLHRLSHRAIPSPPPSRPPTTTSLPFLLSRRLLSDDAAPPPAADVPNKELKRRL ETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPEVRDRDFESDFEEMH DTDEELDNLYNARQYVEKKIKSDEFFNMDDDKWNKMIKKAVDNGHLGNMNECENILEDML HWDKLLPDEIKKKVEAKFNELGDMCEKGELEPEQAYELFKEFEDKMVSECTELMEAENPT DVDEFSKMENKSVKLDDPPGEGPVLRWESRIVFAPGGDAWHPKNRKVKLSVTVKELGLSR HAFRRLREVVGNRYNSGKDELTITSERFEHREENRKDCLRTLYAVVEDANKANKLADDAR NAYVKNRLKANAQFMERLKVKTQKLRVAA

Transcript Sequence

Transcript ID	Os08t0513300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25444538:25450058:1 gene:Os08g0513300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-01);Helix-hairpin-helix motif, class 2 domain containing protein. (Os08t0513300-02)
Sequence	CTCTTCCGGCGCCTGGGCGCTCTTCCCCCCTCTTCCCCGCCGCAATGAGGCGCTTGGTGA CGCACCTCCACCGCCTCTCCCACCGCGCCATCCCTTCCCCGCCTCCATCTCGACCCCCAA CCACCACTAGCCTCCCCTTCCTCCTCTCCCGCCGCCTCCTCTCCGACGACGCCGCGCCTC CGCCCGCCGCCGACGTCCCAAACAAAGAGCTGAAGCGGCGGTTGGAAACTTACTATGGGG TGGACGATGAGGCAGAACTACCATCTGTCACAGAGGCTGTTCTTGAGCGGAAGCTTGCGG ATGTGCACAGCGAGACGGACGATGAACTTATCGAGGAGCTGCGCAGCAAACCACTCCCTG AGGTTCGTGACAGGGATTTTGAGTCCGACTTTGAGGAGATGCACGATACTGATGAGGAGC TGGACAACTTGTACAACGCCAGACAGTATGTGGAGAAAAAGATCAAGAGTGACGAGTTCT TTAATATGGATGACGACAAGTGGAATAAGATGATCAAGAAGGCTGTGGATAATGGCCACC TCGGTAATATGAACGAATGTGAGAATATTTTGGAGGACATGCTCCACTGGGACAAACTAT TACCTGATGAAATTAAAAAGAAGGTGGAGGCCAAATTTAATGAGTTGGGGGACATGTGTG AGAAGGGAGAGCTTGAACCTGAGCAGGCTTATGAATTATTCAAAGAGTTTGAGGATAAGA TGGTTTCAGAGTGCACAGAACTAATGGAAGCTGAGAACCCAACTGACGTGGATGAATTTT CTAAAATGGAAAATAAGAGTGTTAAGTTGGACGATCCACCTGGTGAGGGACCTGTTCTAA GGTGGGAGTCACGTATTGTCTTTGCTCCTGGAGGTGATGCATGGCATCCCAAAAACAGGA AAGTTAAACTCAGTGTGACTGTCAAAGAGCTGGGACTTTCACGACATGCCTTCCGACGTT TACGTGAGGTTGTTGGGAATAGGTACAATTCTGGAAAAGATGAACTCACAATAACTAGTG AAAGGTTTGAGCATCGGGAAGAGAACAGGAAAGATTGCTTGAGGACATTGTATGCTGTAG TAGAAGATGCAAACAAGGCCAATAAGTTGGCTGATGATGCTAGAAATGCATATGTTAAAA ACAGACTTAAGGCCAATGCTCAATTCATGGAAAGGTTGAAGGTGAAGACACAGAAATTGA GGGTAGCTGCATAAGGGGCTCCTGGAGCTACACGCTCTGGAACAATTCCTCTTTCATGAT ATCAGTACGGTCATTTTGCAACAAAGGATGCGGCAGTGAGACGTAGAACGGGAGCAAAAA TGTTTTGTTGTAATTTACATGTGTTGCCTTGTTTGGACGGCCTGTTAGGTTTATCTTTAG CTGAAGCTACACTTTTTGAATTTACCGTGACCGAGCAGGCCTGTTTACATGATCGCATAG TGAACTGGCTGTATCCTGATCTTCTCTACAAATAACAAATTGCTTCTG