Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0512400-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25405005:25408253:-1 gene:Os08g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os08t0512400-01);Similar to AT-hook protein 1. (Os08t0512400-02)
Sequence	ATGGAGGTGAGGTCGGAGCAAGGGCTAATGGCGGGGAGGGATCTGTTCGGCATGCCGAAG AGCCCGCCGGCGGCGGCCGCGGCGCCGCCGCAGAGCGTGCGCATGGCGTACACCTCGGAC GGCACCCCGGTGTTCGCCCCGGTGAGCGCCGCGGTCTCGGCGCCGCCGGGTTACCAGCCG GGTGGCGCCGCCGGTGGCAATGGCGCGGCGGCGCTGGCGGACTCCGGCGGGGAGCCCGTG GCCAAGAAGAAGCGCGGGCGGCCGAGGAAGTACGGCCCCGACGGGTCCATGTCGCTGGGG TTGGTGACCTCGCCGACGGCCGCCGCGTCGACGCCGGTGGCGCAGGGCGTCCCAGGGCCG TTCTCGCCGACGCAGCCGAAGCCGCCGGCGAGCTTCTTGTCGTCGGGGTGGCCGGACGGG GTGAAGAAGCGTGGCCGGCCCAAGGGTTCTACCAACAAGCCGCGCATCGACGCCGTCGGA TCGGCGGGAGTTGGATTTACACCACACGTTATTACAGTTCTAGCTGGAGAGGATGTGTCT GCAAAGATTATGTCGTTTGCTCAGCATGGAAATCGTGCGGTTTGTGTTCTTTCAGCAAAT GGTGCCATATCAAATGTAACACTTCGCCAAACTGCTACTTCAGGTGGAACAGTAACATAT GAGGGCCGATTCGAGATACTATCGCTGTCTGGCTCTTTCCTTCTAACCGACCATGGAGGC CAGCGTAGTCGAACTGGGGGACTCAGTGTTTCACTGGCTGGTCCTGATGGTCGTCTGTTG GGAGGCGGTGTTGCCGGACTTCTCATAGCAGCTACTCCAGTCCAGATTGTGGTTGGAAGC TTCAATTCTGAAGGGAAAAAGGAGCCAAAGCAGCATGCTCATTCAGAACCCGCATCCGCG CCATCGAAAGCCGTGCCGACGGCCGGGATGGGACCCAACAGCCCACCTTCAAGAGGCACA TTGAGTGAATCCTCAGGTGGAGCTGGAAGCCCATTGCATCCAGGCATTGCTCCTCCCAGC AGCAACAGCCAGCCGCCATTCTTGTCTAGCATGCCATGGAAATGA

Peptide Sequence

PEP ID	Os08t0512400-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25405005:25408253:-1 gene:Os08g0512400 transcript:Os08t0512400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os08t0512400-01);Similar to AT-hook protein 1. (Os08t0512400-02)
Sequence	MEVRSEQGLMAGRDLFGMPKSPPAAAAAPPQSVRMAYTSDGTPVFAPVSAAVSAPPGYQP GGAAGGNGAAALADSGGEPVAKKKRGRPRKYGPDGSMSLGLVTSPTAAASTPVAQGVPGP FSPTQPKPPASFLSSGWPDGVKKRGRPKGSTNKPRIDAVGSAGVGFTPHVITVLAGEDVS AKIMSFAQHGNRAVCVLSANGAISNVTLRQTATSGGTVTYEGRFEILSLSGSFLLTDHGG QRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATPVQIVVGSFNSEGKKEPKQHAHSEPASA PSKAVPTAGMGPNSPPSRGTLSESSGGAGSPLHPGIAPPSSNSQPPFLSSMPWK

Transcript Sequence

Transcript ID	Os08t0512400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25405005:25408253:-1 gene:Os08g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os08t0512400-01);Similar to AT-hook protein 1. (Os08t0512400-02)
Sequence	ATCGGTGGATACGAATTTCCGCGGCTTTGTGTTAGAGTTTTTGGTGATACAAGAAACGTG TTCTTGGCCATGGAGGTGAGGTCGGAGCAAGGGCTAATGGCGGGGAGGGATCTGTTCGGC ATGCCGAAGAGCCCGCCGGCGGCGGCCGCGGCGCCGCCGCAGAGCGTGCGCATGGCGTAC ACCTCGGACGGCACCCCGGTGTTCGCCCCGGTGAGCGCCGCGGTCTCGGCGCCGCCGGGT TACCAGCCGGGTGGCGCCGCCGGTGGCAATGGCGCGGCGGCGCTGGCGGACTCCGGCGGG GAGCCCGTGGCCAAGAAGAAGCGCGGGCGGCCGAGGAAGTACGGCCCCGACGGGTCCATG TCGCTGGGGTTGGTGACCTCGCCGACGGCCGCCGCGTCGACGCCGGTGGCGCAGGGCGTC CCAGGGCCGTTCTCGCCGACGCAGCCGAAGCCGCCGGCGAGCTTCTTGTCGTCGGGGTGG CCGGACGGGGTGAAGAAGCGTGGCCGGCCCAAGGGTTCTACCAACAAGCCGCGCATCGAC GCCGTCGGATCGGCGGGAGTTGGATTTACACCACACGTTATTACAGTTCTAGCTGGAGAG GATGTGTCTGCAAAGATTATGTCGTTTGCTCAGCATGGAAATCGTGCGGTTTGTGTTCTT TCAGCAAATGGTGCCATATCAAATGTAACACTTCGCCAAACTGCTACTTCAGGTGGAACA GTAACATATGAGGGCCGATTCGAGATACTATCGCTGTCTGGCTCTTTCCTTCTAACCGAC CATGGAGGCCAGCGTAGTCGAACTGGGGGACTCAGTGTTTCACTGGCTGGTCCTGATGGT CGTCTGTTGGGAGGCGGTGTTGCCGGACTTCTCATAGCAGCTACTCCAGTCCAGATTGTG GTTGGAAGCTTCAATTCTGAAGGGAAAAAGGAGCCAAAGCAGCATGCTCATTCAGAACCC GCATCCGCGCCATCGAAAGCCGTGCCGACGGCCGGGATGGGACCCAACAGCCCACCTTCA AGAGGCACATTGAGTGAATCCTCAGGTGGAGCTGGAAGCCCATTGCATCCAGGCATTGCT CCTCCCAGCAGCAACAGCCAGCCGCCATTCTTGTCTAGCATGCCATGGAAATGAAATGAG ACCTTTTCATCCTTCACCAAACCTGGACTCTGAATCTCTGATAGACTTTGTCGATGAACT GCATCTTCTGCCAGAAAGTAGTAGCAACCGTTGCCACACGTTTTCTCTAACTAGCTCCTA TGATGTAGTGTAAATCTGAAGTTTAATTAGGGGAGAATTTGTAGCTGGTAAGTGTAGCTG TCGTGTAGGTTTCACCCTGGATTTATTATGTATTAGGTAGGTAGTGGTATCTTGAGAGAC ATATGATCATGTTATCCTAATGTCCTATATGCAATGTTATCAAAGATTATTGTT