Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0512100-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:25395116:25397632:1 gene:Os08g0512100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0512100-00)
Sequence

ATGGCGGCGATGGGCGGCGGCGCGGGAGGAGGAGGAAGGGGGCCACGGGACATGAGGCTG
ACGATGCAGGAGGCTGCCAAGAAGCTGTCCCTGTGGGACTCGGCCACGTTCCGCCCAATC
CTCACCCACGTCGAGCTCGAGCCCATCCTCGCCGCCGCCGGGTTCGTCGCGCTGCCCACG
CCGCCGCCGCCGACGACGACGCAGGGCGGCGGCGCGGCGGGCGCGGGGCAGCCGGTGGCG
TGGAGGGAGTACGCGTTCGTCGGGGTCGCGGCGGCGGGGCGGCGGCGGCGGAGCGGCAAT
GCGGCGGTGGCGGCCGGCGTGGGGTGGCTCGGCCCGCGGCCGCGGCTGCCGTGCCCGCGC
GTCGACGCGCTCCACCTCCGCACGTACCAGGCGTTCCTCGGCGCCGTCGAGTTCTACCTC
GGCGCCCTCCGCGTGGCCAGCCTCTTCCACGTCAGGTGCATGCCGGTGACGACGGCGCAG
GACAGGGTGTTCGACAAGGTGTTCCGGGTGATGCGAAGCCACGGCGTGGAGGACGACGGC
CTCATCGTCTACCGCGACGGCACCCTCGACGACGCCACCTACGCCGTCTGCAGCGAGCAC
AGCCCGGTGCAGGACGTCGGCTACCACGTCATCCCGGGGAACACCTGCGTCGAGCTCGGC
TACCTCAAGTCCGGCAGGATCGCCGGCAACTGCGACGAGGAGACCTGCTGCAGAGGCGGC
GCCGCCGCCGCCGACATCGCTCGTGCCAGGAAGCTAGAGCCGCAGTAG

Peptide Sequence

PEP ID

Os08t0512100-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:25395116:25397632:1 gene:Os08g0512100 transcript:Os08t0512100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0512100-00)
Sequence

MAAMGGGAGGGGRGPRDMRLTMQEAAKKLSLWDSATFRPILTHVELEPILAAAGFVALPT
PPPPTTTQGGGAAGAGQPVAWREYAFVGVAAAGRRRRSGNAAVAAGVGWLGPRPRLPCPR
VDALHLRTYQAFLGAVEFYLGALRVASLFHVRCMPVTTAQDRVFDKVFRVMRSHGVEDDG
LIVYRDGTLDDATYAVCSEHSPVQDVGYHVIPGNTCVELGYLKSGRIAGNCDEETCCRGG
AAAADIARARKLEPQ

Transcript Sequence

Transcript ID

Os08t0512100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:25395116:25397632:1 gene:Os08g0512100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0512100-00)
Sequence

GCAGAGAGAATCCCAATGCATCTCCCTATCTCATCTCTCACGACGCCCACCTTTCGCTGC
TCCCTCTCCTAATTTAATTTTTTTCCCCCAAAATCTTCTCTTTTTAATTTTTTTTGATTC
AAATAATCTCAAGAGAAGTCTTCATCGCGAACATAAATAAAACGCGAGGTGTGGGTGACG
CGTCCATCCACCGAGATAAACCCCAAGAGAAACCTCTCCTCCCATGGCGGCGATGGGCGG
CGGCGCGGGAGGAGGAGGAAGGGGGCCACGGGACATGAGGCTGACGATGCAGGAGGCTGC
CAAGAAGCTGTCCCTGTGGGACTCGGCCACGTTCCGCCCAATCCTCACCCACGTCGAGCT
CGAGCCCATCCTCGCCGCCGCCGGGTTCGTCGCGCTGCCCACGCCGCCGCCGCCGACGAC
GACGCAGGGCGGCGGCGCGGCGGGCGCGGGGCAGCCGGTGGCGTGGAGGGAGTACGCGTT
CGTCGGGGTCGCGGCGGCGGGGCGGCGGCGGCGGAGCGGCAATGCGGCGGTGGCGGCCGG
CGTGGGGTGGCTCGGCCCGCGGCCGCGGCTGCCGTGCCCGCGCGTCGACGCGCTCCACCT
CCGCACGTACCAGGCGTTCCTCGGCGCCGTCGAGTTCTACCTCGGCGCCCTCCGCGTGGC
CAGCCTCTTCCACGTCAGGTGCATGCCGGTGACGACGGCGCAGGACAGGGTGTTCGACAA
GGTGTTCCGGGTGATGCGAAGCCACGGCGTGGAGGACGACGGCCTCATCGTCTACCGCGA
CGGCACCCTCGACGACGCCACCTACGCCGTCTGCAGCGAGCACAGCCCGGTGCAGGACGT
CGGCTACCACGTCATCCCGGGGAACACCTGCGTCGAGCTCGGCTACCTCAAGTCCGGCAG
GATCGCCGGCAACTGCGACGAGGAGACCTGCTGCAGAGGCGGCGCCGCCGCCGCCGACAT
CGCTCGTGCCAGGAAGCTAGAGCCGCAGTAG