Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0509200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:25250329:25254599:-1 gene:Os08g0509200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 27 description:Similar to Beta-primeverosidase (EC 3.2.1.149). (Os08t0509200-01);Similar to Beta-glucosidase isozyme 2. (Os08t0509200-02)
Sequence	ATGCGTTGGCTTCTCCTTGCCCTGTTCTTGGTTGCTCTGGTGAGCAACGGCGCCGCCGTC CATGGCGCCTTCAACAGGTTCAGCTTCCCGGAGGACTTCATCTTCGGCACCGGCTCCGCG GCTTATCAGTACGAAGGCGCTGTGAACGAAGGCGGCAGAGGGCCGAGCATCTGGGACACG TACGCTCACATTCCAGGCAAAGTTGAAGATGGTAGCAACGGGGATGTAGCAGTGGACTTT TACCATCGCTACAAGGAGGATCTGAACTTCGTGACCGACATGAACATGGACGCCTTCCGT TTCTCCATTGCTTGGAGCAGGATCCTGCCAAATGGAACCATCAGTGGAGGAATCAACAAA GAGGGGATTGCTTTCTACAACAGCCTGATTAACGAGGTCATATCTAGAGGGTTGAAGCCA TTTGTCACCATCTTCCATTTCGACACCCCACAGGCTCTGGAGGACAAATACCGGAGCTTC CTCAGTGAAAACATTGTGAAGGATTTCGTGGACTATGCGGACGTGTGCTTCCGTGAGTTC GGCGACCGGGTGAAGTCATGGAACACGTTCAACGAGCCGATGATCTTCTGCGCCGGCGGC TACGGCTCCGGCACCAAGGCCCCCGGCCGCTGCTCGCCGTACGTCTCCAAGAAATGCGCC CCCGGCGACTCCGGCAACGAGCCGTACGTCGCCGGCCACAACCTGCTGCTCGCCCACGCC GAGGCCGTCCGCCTCTACCGCCAAAAGTACCAGGCGACGCAGAAGGGGCAGATCGGCATC ACGCAGGTGTCGCACTGGTTCGTGCCCTACAGCGACGCCGCCGCCGACAAGCACGCCGTC AGGCGCAGCCTCGACTTCATGTACGGATGGTTCATGGACCCGATCGTGTTCGGCGACTAC CCGGGCACCATGAGGAAGTTGGTCGGTGACCGGCTGCCCAAATTCACAGCCGAGCAGTCG GAGTTGGTGAAGGGATCCTACGACTTCATCGGCCTCAACTACTACACCACCAACTACGCT AAGAGCGTTCTACGACGCCCGAGCAAGCTCAAACCCGCCTACGCTACTGACAACTGGGTA AATCAAACAGCTTACCGCAACGGCGTCCCGATCGGTCCGCCGGCTTTTACCAAGATCTTC TTCACCTACGCGCCGGGTCTGCGTGAGCTGCTTCTGTATACCAAGAGGAAGTACAATGAC CCTGACATCTACATTGCAGAGAACGGCACCGACGAGGCGAACAACAGCACGATCCCTATC GCCGAGGCGCTCAAGGATGACAACCGAATATCCTTCCACTACCAGCATCTCCGCTTCACT CAGCTCGCAATCAAGTAG

Peptide Sequence

PEP ID	Os08t0509200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:25250329:25254599:-1 gene:Os08g0509200 transcript:Os08t0509200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 27 description:Similar to Beta-primeverosidase (EC 3.2.1.149). (Os08t0509200-01);Similar to Beta-glucosidase isozyme 2. (Os08t0509200-02)
Sequence	MRWLLLALFLVALVSNGAAVHGAFNRFSFPEDFIFGTGSAAYQYEGAVNEGGRGPSIWDT YAHIPGKVEDGSNGDVAVDFYHRYKEDLNFVTDMNMDAFRFSIAWSRILPNGTISGGINK EGIAFYNSLINEVISRGLKPFVTIFHFDTPQALEDKYRSFLSENIVKDFVDYADVCFREF GDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCSPYVSKKCAPGDSGNEPYVAGHNLLLAHA EAVRLYRQKYQATQKGQIGITQVSHWFVPYSDAAADKHAVRRSLDFMYGWFMDPIVFGDY PGTMRKLVGDRLPKFTAEQSELVKGSYDFIGLNYYTTNYAKSVLRRPSKLKPAYATDNWV NQTAYRNGVPIGPPAFTKIFFTYAPGLRELLLYTKRKYNDPDIYIAENGTDEANNSTIPI AEALKDDNRISFHYQHLRFTQLAIK

Transcript Sequence

Transcript ID	Os08t0509200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25250329:25254599:-1 gene:Os08g0509200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 27 description:Similar to Beta-primeverosidase (EC 3.2.1.149). (Os08t0509200-01);Similar to Beta-glucosidase isozyme 2. (Os08t0509200-02)
Sequence	GCTACTTAAACAAGTAGAGACACTTCTTCATTTGCAGCCAATTTGATTGCTTGCAAAATT GTGCCAAATTTTCAGTACTAGATAAGATAGGATCAGAGTTCGACCAGCTGGGATGCGTTG GCTTCTCCTTGCCCTGTTCTTGGTTGCTCTGGTGAGCAACGGCGCCGCCGTCCATGGCGC CTTCAACAGGTTCAGCTTCCCGGAGGACTTCATCTTCGGCACCGGCTCCGCGGCTTATCA GTACGAAGGCGCTGTGAACGAAGGCGGCAGAGGGCCGAGCATCTGGGACACGTACGCTCA CATTCCAGGCAAAGTTGAAGATGGTAGCAACGGGGATGTAGCAGTGGACTTTTACCATCG CTACAAGGAGGATCTGAACTTCGTGACCGACATGAACATGGACGCCTTCCGTTTCTCCAT TGCTTGGAGCAGGATCCTGCCAAATGGAACCATCAGTGGAGGAATCAACAAAGAGGGGAT TGCTTTCTACAACAGCCTGATTAACGAGGTCATATCTAGAGGGTTGAAGCCATTTGTCAC CATCTTCCATTTCGACACCCCACAGGCTCTGGAGGACAAATACCGGAGCTTCCTCAGTGA AAACATTGTGAAGGATTTCGTGGACTATGCGGACGTGTGCTTCCGTGAGTTCGGCGACCG GGTGAAGTCATGGAACACGTTCAACGAGCCGATGATCTTCTGCGCCGGCGGCTACGGCTC CGGCACCAAGGCCCCCGGCCGCTGCTCGCCGTACGTCTCCAAGAAATGCGCCCCCGGCGA CTCCGGCAACGAGCCGTACGTCGCCGGCCACAACCTGCTGCTCGCCCACGCCGAGGCCGT CCGCCTCTACCGCCAAAAGTACCAGGCGACGCAGAAGGGGCAGATCGGCATCACGCAGGT GTCGCACTGGTTCGTGCCCTACAGCGACGCCGCCGCCGACAAGCACGCCGTCAGGCGCAG CCTCGACTTCATGTACGGATGGTTCATGGACCCGATCGTGTTCGGCGACTACCCGGGCAC CATGAGGAAGTTGGTCGGTGACCGGCTGCCCAAATTCACAGCCGAGCAGTCGGAGTTGGT GAAGGGATCCTACGACTTCATCGGCCTCAACTACTACACCACCAACTACGCTAAGAGCGT TCTACGACGCCCGAGCAAGCTCAAACCCGCCTACGCTACTGACAACTGGGTAAATCAAAC AGCTTACCGCAACGGCGTCCCGATCGGTCCGCCGGCTTTTACCAAGATCTTCTTCACCTA CGCGCCGGGTCTGCGTGAGCTGCTTCTGTATACCAAGAGGAAGTACAATGACCCTGACAT CTACATTGCAGAGAACGGCACCGACGAGGCGAACAACAGCACGATCCCTATCGCCGAGGC GCTCAAGGATGACAACCGAATATCCTTCCACTACCAGCATCTCCGCTTCACTCAGCTCGC AATCAAGTAGCCACATCAAAATCCAATCAAATTCAGTTCTGTTTCTTCTGGATATAGGTA GGTTGGCTGCAATGTGAGTGTGAATTGAAATTTGGACGAAATTTGCAGGGAAGGGGTGAA GGTGAAAGGCTACTTCACGTGGACGTTCATGGACGACTTCGAGTGGGGCGACGGCTACAC CGGCCGCTTCGGCCTCATCTACGTCGACCGCGAAACTCTCAAGAGGTATCGCAAGAAGTC CAGCTACTGGTTCGCTGACTTCCTCAAGCGATGATGAAAAAGAAGAAGAAATCAACTAGC TCACTTCACTAGCCTGATCTCCTGAATAAAATGATCTCCTGAATAAAAAAGTTCCTGAAT AATCTTTTGGCCTCAATGATTCGACTGGCTGCATGTGGCCATTGTACTTGTTAGCTCTGA GAAATAAAAGTGCAGTCTTGACTCTCGACGAATATAAGCAATTTAACTTGTGTACTACTA CTGCTGACAAATACTGGGGAATATAAGCAGTAATTCAGAGTTTCAGAGACATGAATGATC AATTGTAAGCAGTATTTCAGCAGTAGTTTAGAGACATGTAATTCAGAGTTTGCTTGTACA CAAACTCAGTAATTCAGAGTTTCAGAGACATGAATGATCAATTGTAAGGAGAAATGGGGC TTTTGTCGTCTCAGACACAAGAATAAGCCCTTGTTTAGTTCCC