Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0508800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:25216460:25224078:-1 gene:Os08g0508800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase Lox2:Os:1, lipoxygenase 9, lipoxygenase 8, herbivore-induced type 2 13-lipoxygenase, RLL2 lipoxygenase description:Lipoxygenase, chloroplast precursor (EC 1.13.11.12). (Os08t0508800-01)
Sequence	ATGTTGCGTCCTCAGCTCAATCCATCTAGCCACACGACGACGACGAGCAGCAGCAGCAGC ACGCAGCTGTTCGCATCCTCGTCGTGCATCGCTAGCCTTCGCCGGCCGTCGTCGTCGTCG TCGTCGGTGGTCGCCGCCGCACGCCGGACGCGGGGGCAAGGTAGCAGTCGGGTTGTTGTT GTGTGCGCGTCGTCGTCGGCGACGGCGAGCAGGGGAGATAGTTCTTCGGACATGGCGGCG GCGGCGGCGGTGCGGGTGAAGGCGGTGGCGACGATCAAGGTCACCGTCGGCGAGTTGATC AACAGGTCGATCGACATCAGGGATCTCATCGGCAGGTCGCTCTCCCTCGAGCTCGTCAGC TCCGAGCTTGACGCGAAGACCGGGAAGGAGAAAGCAACTGTGCGGAGCTACGCGCACAAT GTGGACGACGACGATCATAGCGTCGTCACCTACGAGGCCGACTTCGACGTGCCGAGTGGA TTCGGCCCCATCGGCGCCATCATCGTCACCAACGAACTCCGGCAGGAGATGTTCCTCGAG GACATCAACCTCACCGCCAGCGATGGCGCCGGCAACTCCACTGTCCTCCCCATCCGCTGC AACTCCTGGGTCCAACCCAAGTCCGTCGGCGATGAGGGCACGCCTAGCAAACGCATCTTC TTCGCCAACAAGACTTACTTGCCGGGACAGACGCCGGCGGGGCTCCGGAGCTACCGGAAG AATGACCTCCAGCAGAAGCGCGGTGACGGCACTGGCGAGAGGGAGGCCGACGACCGTGTC TACGACTACGACGTTTACAACGACCTCGGTAACCCGGACAGCAACGGCGATCTCGCCCGC CCCGTCCTTGGCGGCAACAAGCAGTTCCCCTACCCTCGCCGCTGCCGCACCGGCCGCCCC CCCTCCAAAAAAGACCCTAAGTCGGAGACGAGGAAGGGCAACGTGTACGTGCCGAGGGAC GAGGAGTTCTCACCGGAGAAGGAGGACTACTTCCTCCGCAAGACGGTGGGGTCGGTGCTC CAGGCCGCCGTGCCGGCGGCGCAGTCGCTGCTCCTCGACAAGCTGAAATGGAACCTTCCG TTCCCGTCCTTCTTCGTCATCGACAAGCTGTTCGAGGACGGCGTCGAGCTTCCCGGCGTC GACAAGCTCAACTTCCTCGAGAGCGTCGTGCCCCGCCTGCTCGAACACCTCCGCGACACC CCCGCCGAGAAGATCCTCCGCTTCGAAACTCCGGCCAACATCCAAAAGGACAAGTTCGCA TGGCTCAGAGACGAGGAGTTCGCGAGGGAAACGCTCGCTGGCATCAACCCGTACGCCATC GAGCTCGTCAGGGAATTTCCGCTGAAGAGCAAGCTCGACCCGGCGGTGTACGGTCCGGCG GAGTCGGCGATCACCGCCGATTTGCTGGAGGAGCAGATGAGGCGCGTGATGACGGTGGAG GAGGCGATCAGCCAGAAGAGGCTGTTCATGCTCGACTTCCATGACCTCTTCTTGCCGTAC GTGCACAAGATCCGGTCGCTGGATCACACCACCATGTACGGCTCGCGCACCGTCTTCTTC CTCACCGACGACGGCACGCTGCAGCTGCTCGCCATCGAGCTCACCCGGCCGGCCTCGCCG TCGCAGCCGCAGTGGCGGCAGGTGTTCACGCCGTCCACGGACGCCACCATGTCGTGGCTG TGGCGGATGGCCAAGGCCCACGTCCGCGCCCACGACGCCGGCCACCACGAGCTCATCACC CACTGGCTGCGCACGCACTGCGCGGTGGAGCCATACATCATCGCGGCGAACCGGCAGCTC AGCGAGATGCACCCCATCTACCAGCTGCTGCGCCCGCACTTCCGCTACACGATGCGGATC AACGCGCGCGCCCGCTCGGCGCTGATCAGCGCCGGCGGCATCATCGAGCGATCCTTCTCG CCGCAGAAGTACTCCATGGAGCTCAGCTCCGTCGCCTACGACAAGCTCTGGCGCTTCGAC ACGGAGGCGCTCCCCGCCGACCTCGTCCGCCGCGGCATGGCCGAGGAGGACCCCACGGCG GAGCACGGCCTCAAGCTCGCCATCGAGGACTACCCGTTCGCCAACGACGGCCTCCTCATC TGGGACGCCATCAAGACCTGGGTCCAGGCGTACGTCGCGCGGTTCTACCCCGACGCCGAC AGCGTCGCCGGCGACGAGGAGCTCCAGGCGTTCTGGACCGAGGTGCGCACCAAGGGGCAC GGCGACAAGAAGGACGCCCCGTGGTGGCCGAAGTTGGACTCGCCGGAGAGCCTCGCCCAC ACGCTGACCACCATCGTCTGGGTGGCGGCGGCGCACCACGCCGCCGTCAACTTCGGGCAG TACGACTTCGGCGGCTACTTCCCCAACCGGCCGTCCATCGCGCGCACGGTCATGCCGGTG GAGGAGCCCGTGGACGGCGCCGCCATGGAGAGGTTCCTGGACAACCCGGACCAGGCGCTC CGCGAGTGCTTCCCGTCACAGGTGCAGGCGACGGTGGTGATGGCGGTGCTCGACGTGCTG TCCAGCCACTCCACCGACGAGGAGTACCTCGGCGGCGAGCAGACGAGGCCGTGGAACAGC GACGCGGCGGTGCAGGCGGCGTACGACGGGTTCGCAGCCCGGCTCAAGGAGATCGAGGGC GTCATCGATGGCCGGAACAAGGATAGAAAGCTCAAGAACAGGTGCGGCGCCGGCATCCTG CCGTACCAGCTGATGAAGCCCTTCTCCGACTCCGGCGTCACCGGCATGGGCATCCCCAAC AGCACATCCATCTGA

Peptide Sequence

PEP ID	Os08t0508800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:25216460:25224078:-1 gene:Os08g0508800 transcript:Os08t0508800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase Lox2:Os:1, lipoxygenase 9, lipoxygenase 8, herbivore-induced type 2 13-lipoxygenase, RLL2 lipoxygenase description:Lipoxygenase, chloroplast precursor (EC 1.13.11.12). (Os08t0508800-01)
Sequence	MLRPQLNPSSHTTTTSSSSSTQLFASSSCIASLRRPSSSSSSVVAAARRTRGQGSSRVVV VCASSSATASRGDSSSDMAAAAAVRVKAVATIKVTVGELINRSIDIRDLIGRSLSLELVS SELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLE DINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRK NDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRP PSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLP FPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFA WLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVE EAISQKRLFMLDFHDLFLPYVHKIRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPASP SQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQL SEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFD TEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDAD SVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQ YDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVL SSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGIL PYQLMKPFSDSGVTGMGIPNSTSI

Transcript Sequence

Transcript ID	Os08t0508800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25216460:25224078:-1 gene:Os08g0508800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase Lox2:Os:1, lipoxygenase 9, lipoxygenase 8, herbivore-induced type 2 13-lipoxygenase, RLL2 lipoxygenase description:Lipoxygenase, chloroplast precursor (EC 1.13.11.12). (Os08t0508800-01)
Sequence	AATTAGCTCGATCTGCAAGCAATCCAAAGCCAACCCAAGCCAAGCTCACGAGTGCAGAGC TAGACGACGTGTAGATACGTAGTCTCCTCCGATATCTCTCTCTCTCTCGATCGACGCCTC TGCATATATAATACCCATACCATGTTGCGTCCTCAGCTCAATCCATCTAGCCACACGACG ACGACGAGCAGCAGCAGCAGCACGCAGCTGTTCGCATCCTCGTCGTGCATCGCTAGCCTT CGCCGGCCGTCGTCGTCGTCGTCGTCGGTGGTCGCCGCCGCACGCCGGACGCGGGGGCAA GGTAGCAGTCGGGTTGTTGTTGTGTGCGCGTCGTCGTCGGCGACGGCGAGCAGGGGAGAT AGTTCTTCGGACATGGCGGCGGCGGCGGCGGTGCGGGTGAAGGCGGTGGCGACGATCAAG GTCACCGTCGGCGAGTTGATCAACAGGTCGATCGACATCAGGGATCTCATCGGCAGGTCG CTCTCCCTCGAGCTCGTCAGCTCCGAGCTTGACGCGAAGACCGGGAAGGAGAAAGCAACT GTGCGGAGCTACGCGCACAATGTGGACGACGACGATCATAGCGTCGTCACCTACGAGGCC GACTTCGACGTGCCGAGTGGATTCGGCCCCATCGGCGCCATCATCGTCACCAACGAACTC CGGCAGGAGATGTTCCTCGAGGACATCAACCTCACCGCCAGCGATGGCGCCGGCAACTCC ACTGTCCTCCCCATCCGCTGCAACTCCTGGGTCCAACCCAAGTCCGTCGGCGATGAGGGC ACGCCTAGCAAACGCATCTTCTTCGCCAACAAGACTTACTTGCCGGGACAGACGCCGGCG GGGCTCCGGAGCTACCGGAAGAATGACCTCCAGCAGAAGCGCGGTGACGGCACTGGCGAG AGGGAGGCCGACGACCGTGTCTACGACTACGACGTTTACAACGACCTCGGTAACCCGGAC AGCAACGGCGATCTCGCCCGCCCCGTCCTTGGCGGCAACAAGCAGTTCCCCTACCCTCGC CGCTGCCGCACCGGCCGCCCCCCCTCCAAAAAAGACCCTAAGTCGGAGACGAGGAAGGGC AACGTGTACGTGCCGAGGGACGAGGAGTTCTCACCGGAGAAGGAGGACTACTTCCTCCGC AAGACGGTGGGGTCGGTGCTCCAGGCCGCCGTGCCGGCGGCGCAGTCGCTGCTCCTCGAC AAGCTGAAATGGAACCTTCCGTTCCCGTCCTTCTTCGTCATCGACAAGCTGTTCGAGGAC GGCGTCGAGCTTCCCGGCGTCGACAAGCTCAACTTCCTCGAGAGCGTCGTGCCCCGCCTG CTCGAACACCTCCGCGACACCCCCGCCGAGAAGATCCTCCGCTTCGAAACTCCGGCCAAC ATCCAAAAGGACAAGTTCGCATGGCTCAGAGACGAGGAGTTCGCGAGGGAAACGCTCGCT GGCATCAACCCGTACGCCATCGAGCTCGTCAGGGAATTTCCGCTGAAGAGCAAGCTCGAC CCGGCGGTGTACGGTCCGGCGGAGTCGGCGATCACCGCCGATTTGCTGGAGGAGCAGATG AGGCGCGTGATGACGGTGGAGGAGGCGATCAGCCAGAAGAGGCTGTTCATGCTCGACTTC CATGACCTCTTCTTGCCGTACGTGCACAAGATCCGGTCGCTGGATCACACCACCATGTAC GGCTCGCGCACCGTCTTCTTCCTCACCGACGACGGCACGCTGCAGCTGCTCGCCATCGAG CTCACCCGGCCGGCCTCGCCGTCGCAGCCGCAGTGGCGGCAGGTGTTCACGCCGTCCACG GACGCCACCATGTCGTGGCTGTGGCGGATGGCCAAGGCCCACGTCCGCGCCCACGACGCC GGCCACCACGAGCTCATCACCCACTGGCTGCGCACGCACTGCGCGGTGGAGCCATACATC ATCGCGGCGAACCGGCAGCTCAGCGAGATGCACCCCATCTACCAGCTGCTGCGCCCGCAC TTCCGCTACACGATGCGGATCAACGCGCGCGCCCGCTCGGCGCTGATCAGCGCCGGCGGC ATCATCGAGCGATCCTTCTCGCCGCAGAAGTACTCCATGGAGCTCAGCTCCGTCGCCTAC GACAAGCTCTGGCGCTTCGACACGGAGGCGCTCCCCGCCGACCTCGTCCGCCGCGGCATG GCCGAGGAGGACCCCACGGCGGAGCACGGCCTCAAGCTCGCCATCGAGGACTACCCGTTC GCCAACGACGGCCTCCTCATCTGGGACGCCATCAAGACCTGGGTCCAGGCGTACGTCGCG CGGTTCTACCCCGACGCCGACAGCGTCGCCGGCGACGAGGAGCTCCAGGCGTTCTGGACC GAGGTGCGCACCAAGGGGCACGGCGACAAGAAGGACGCCCCGTGGTGGCCGAAGTTGGAC TCGCCGGAGAGCCTCGCCCACACGCTGACCACCATCGTCTGGGTGGCGGCGGCGCACCAC GCCGCCGTCAACTTCGGGCAGTACGACTTCGGCGGCTACTTCCCCAACCGGCCGTCCATC GCGCGCACGGTCATGCCGGTGGAGGAGCCCGTGGACGGCGCCGCCATGGAGAGGTTCCTG GACAACCCGGACCAGGCGCTCCGCGAGTGCTTCCCGTCACAGGTGCAGGCGACGGTGGTG ATGGCGGTGCTCGACGTGCTGTCCAGCCACTCCACCGACGAGGAGTACCTCGGCGGCGAG CAGACGAGGCCGTGGAACAGCGACGCGGCGGTGCAGGCGGCGTACGACGGGTTCGCAGCC CGGCTCAAGGAGATCGAGGGCGTCATCGATGGCCGGAACAAGGATAGAAAGCTCAAGAAC AGGTGCGGCGCCGGCATCCTGCCGTACCAGCTGATGAAGCCCTTCTCCGACTCCGGCGTC ACCGGCATGGGCATCCCCAACAGCACATCCATCTGATGAGACAAAACGCTCCAAAACTAC TTGCAAATTGATCATTCATCATCTACTGTTTTAACCAATATGTCACTCCCAAATCTTTAT TGATTTTTATCATGTTTGAAAAGATAATCGAGAGGTATCATACCATTTTTATAGTCTAAA ATTTAGATATTATGTATCTCAAGGTATCACAATGTTTAATGTAAATAAATTTTGTTACCT CAAGATATTTTCTTAGCGACTGTAATTTTTTT