Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0508100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:25156907:25159842:-1 gene:Os08g0508100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0508100-01)
Sequence

ATGGCGGCCGAGGCGACCACCTCGTCGTCCTCGTCCACCCACCACCCGCCCCACGCCACC
GCGGCGGTCCCGGCCCCCGCCACGCGGCACGAAATCCAGGCGGCCATCGCCAAGGCCACC
GAGCTGCGCGCGCTCCACGCCGCGCTCCTCCAGGGCCAGGGCGCCGCGGCGGCCAATGCC
GGGAGCGCGTACAGCCGCAGCCCCGCCGCGTCGCTCATCCGCCTCCCGCCTGGCGCGTCG
CCCGCGCTCTCCAAGGCCGCCGCCGCCGCCGTCGCCGAGGACTACCCCGTCTTCACTCCG
ACTTATGATGAAGAGGCACTTAGTGGAATGAATTATATTCGCCAAGACAACAGGAGCCTA
TCTGAGAACTGGAGCGGAATCGGCTTGGATCATGAAGGTCAGGAAGATGAGGTGGCTTTC
TCAGATTTCGACAATCACAACACATTCTCTTCATCAAACAGTGAGCTCCACTTTTCTTCA
TCGAACGAGCATCGACGGAACAGAATGGGATGCAGAAACCATCCATCCTTCCTTCAGCCT
GCTCTCTCCACCGACAGTTTCATCAAATCGGCTAGCAAGAGGACAGATTTGGCAGAATTC
AAAGCTGTGACTACTTGCAACACCTGCAAGCCTGCAACAATCAGTAGGCACCCTGAAGCC
GATGTCGATGCTCTCAAGAACCTCAGCAGTAGAGTGCCGCCGCAGTCAAATTACCACCCA
TCCATCTGCTCAAGGCCAAGGCAGAAGGGGCCACATATTCTCTCGTGGCTCTTACCCAAG
TCAAAGAGGAAAGTGAAGTCGGACATGTCGCCAAACACCGTCGAATGCGAGAACATGTCA
CAGCTTCTTAAGGAATGGGGGGTGTTTTCTCTAGAATCTCTGAAAAAGGAGCTTGCTGAG
GCCAATGAAAATAGGGATGCTGCTCTTCAAGAAGCTGCAGAGATGAAATCGTCGTTAGGA
GAACTGACCACCAAGCTAGTGAGCTTGGAAGGGTACTGCTCGGAACTGAAGAAGGCTTTG
AAGCAAGCGACCAGCACCAAGAACATGATATCTCACTCGAAAAGATCAGCTAGATCACTT
GCTGTTAGTAGAGACAATTCTATGCCCGTCAGTCATGAAGTAATGGTGGAGGGTTTCTTG
CAGATAGTATCAGAAGCTCGCCTTTCCATCAAACAGTTCTGCAAGGTATTAATCCAACAA
GTTGAAGATGCTGACAACGGACTATCTGATAAGCTAAACTTACTCCTACAACCTTATCAA
GTCACGCTAACCGACAAGCACCCGAAGGTAGTACTGTATCATCTCGAAGCTCTGATGAAC
CAAGCAATGTATCAAGATTTTGAGAACTGCACATTCCAGAAGAACGGGCCACCCAAGTAT
CTCGACCCAAAAGAAGATCGTCAGGAGAACTTTGCTTCATTTGTTGCGCTTCGCAACTTG
AGCTGGAATGAAGTCTTGAAGAAGGGCACCAAGTACCACTGTGAGGACTTCAGCCGCTTC
TGCGATCAGAAAATGAGCTGCATTGTCTCCATGCTGAACTGGTCATGGCCATGGGCAGAG
CAGCTGCTGCAGTGCTTCTTTGTGGCTTCCAAGTGCATCTGGTTGCTCCACCTGCTGGCA
TTCTCATTCAGCCCACCTCTGGTGATATTGCGCGTCGAGGAGAACCGGGCATTCGATCAG
ATGTACATGGAAGACATCCATCTTGACAAGCAAAGGTCACAGAACCCTTGCCAAGTAAAG
ATCATGGTGACTCCCGGGTTTTATGTCCAAGATCGGGTGCTCAAATGCAGGGTACTCGGC
AGGTACAGCTAG

Peptide Sequence

PEP ID

Os08t0508100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:25156907:25159842:-1 gene:Os08g0508100 transcript:Os08t0508100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0508100-01)
Sequence

MAAEATTSSSSSTHHPPHATAAVPAPATRHEIQAAIAKATELRALHAALLQGQGAAAANA
GSAYSRSPAASLIRLPPGASPALSKAAAAAVAEDYPVFTPTYDEEALSGMNYIRQDNRSL
SENWSGIGLDHEGQEDEVAFSDFDNHNTFSSSNSELHFSSSNEHRRNRMGCRNHPSFLQP
ALSTDSFIKSASKRTDLAEFKAVTTCNTCKPATISRHPEADVDALKNLSSRVPPQSNYHP
SICSRPRQKGPHILSWLLPKSKRKVKSDMSPNTVECENMSQLLKEWGVFSLESLKKELAE
ANENRDAALQEAAEMKSSLGELTTKLVSLEGYCSELKKALKQATSTKNMISHSKRSARSL
AVSRDNSMPVSHEVMVEGFLQIVSEARLSIKQFCKVLIQQVEDADNGLSDKLNLLLQPYQ
VTLTDKHPKVVLYHLEALMNQAMYQDFENCTFQKNGPPKYLDPKEDRQENFASFVALRNL
SWNEVLKKGTKYHCEDFSRFCDQKMSCIVSMLNWSWPWAEQLLQCFFVASKCIWLLHLLA
FSFSPPLVILRVEENRAFDQMYMEDIHLDKQRSQNPCQVKIMVTPGFYVQDRVLKCRVLG
RYS

Transcript Sequence

Transcript ID

Os08t0508100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:25156907:25159842:-1 gene:Os08g0508100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0508100-01)
Sequence

CCCTCTCTCTTCCTCCGCTCTGCTATGACCTGTAGCACTTCAACCCACACCACCACTTGA
CCCCGCTCCCCGCGCCGCCGTCGCCGCCGCCGCCCTCGCCGGTGTCCATGGCGGCCGAGG
CGACCACCTCGTCGTCCTCGTCCACCCACCACCCGCCCCACGCCACCGCGGCGGTCCCGG
CCCCCGCCACGCGGCACGAAATCCAGGCGGCCATCGCCAAGGCCACCGAGCTGCGCGCGC
TCCACGCCGCGCTCCTCCAGGGCCAGGGCGCCGCGGCGGCCAATGCCGGGAGCGCGTACA
GCCGCAGCCCCGCCGCGTCGCTCATCCGCCTCCCGCCTGGCGCGTCGCCCGCGCTCTCCA
AGGCCGCCGCCGCCGCCGTCGCCGAGGACTACCCCGTCTTCACTCCGACTTATGATGAAG
AGGCACTTAGTGGAATGAATTATATTCGCCAAGACAACAGGAGCCTATCTGAGAACTGGA
GCGGAATCGGCTTGGATCATGAAGGTCAGGAAGATGAGGTGGCTTTCTCAGATTTCGACA
ATCACAACACATTCTCTTCATCAAACAGTGAGCTCCACTTTTCTTCATCGAACGAGCATC
GACGGAACAGAATGGGATGCAGAAACCATCCATCCTTCCTTCAGCCTGCTCTCTCCACCG
ACAGTTTCATCAAATCGGCTAGCAAGAGGACAGATTTGGCAGAATTCAAAGCTGTGACTA
CTTGCAACACCTGCAAGCCTGCAACAATCAGTAGGCACCCTGAAGCCGATGTCGATGCTC
TCAAGAACCTCAGCAGTAGAGTGCCGCCGCAGTCAAATTACCACCCATCCATCTGCTCAA
GGCCAAGGCAGAAGGGGCCACATATTCTCTCGTGGCTCTTACCCAAGTCAAAGAGGAAAG
TGAAGTCGGACATGTCGCCAAACACCGTCGAATGCGAGAACATGTCACAGCTTCTTAAGG
AATGGGGGGTGTTTTCTCTAGAATCTCTGAAAAAGGAGCTTGCTGAGGCCAATGAAAATA
GGGATGCTGCTCTTCAAGAAGCTGCAGAGATGAAATCGTCGTTAGGAGAACTGACCACCA
AGCTAGTGAGCTTGGAAGGGTACTGCTCGGAACTGAAGAAGGCTTTGAAGCAAGCGACCA
GCACCAAGAACATGATATCTCACTCGAAAAGATCAGCTAGATCACTTGCTGTTAGTAGAG
ACAATTCTATGCCCGTCAGTCATGAAGTAATGGTGGAGGGTTTCTTGCAGATAGTATCAG
AAGCTCGCCTTTCCATCAAACAGTTCTGCAAGGTATTAATCCAACAAGTTGAAGATGCTG
ACAACGGACTATCTGATAAGCTAAACTTACTCCTACAACCTTATCAAGTCACGCTAACCG
ACAAGCACCCGAAGGTAGTACTGTATCATCTCGAAGCTCTGATGAACCAAGCAATGTATC
AAGATTTTGAGAACTGCACATTCCAGAAGAACGGGCCACCCAAGTATCTCGACCCAAAAG
AAGATCGTCAGGAGAACTTTGCTTCATTTGTTGCGCTTCGCAACTTGAGCTGGAATGAAG
TCTTGAAGAAGGGCACCAAGTACCACTGTGAGGACTTCAGCCGCTTCTGCGATCAGAAAA
TGAGCTGCATTGTCTCCATGCTGAACTGGTCATGGCCATGGGCAGAGCAGCTGCTGCAGT
GCTTCTTTGTGGCTTCCAAGTGCATCTGGTTGCTCCACCTGCTGGCATTCTCATTCAGCC
CACCTCTGGTGATATTGCGCGTCGAGGAGAACCGGGCATTCGATCAGATGTACATGGAAG
ACATCCATCTTGACAAGCAAAGGTCACAGAACCCTTGCCAAGTAAAGATCATGGTGACTC
CCGGGTTTTATGTCCAAGATCGGGTGCTCAAATGCAGGGTACTCGGCAGGTACAGCTAGA
TCTTTGACAAAATGCTGATTTATCTTTTAGTTTCCTTGACCAATTGATGTTAGCTTAGTA
GTAGCATTTGTCTGTTAAGTTGCAAAGTATACAAGAATGTCAGGATATTGGTTCACGTGT
GTGCCTAGTGGCTAGTGCCAATAGATCTGTAGTACCATCTGCTGAGTAAGCAAGCCATCT
GCAGTTCTGCACGACAGATTTATGCAAAAAAAAAGAGAGAAGAAG