Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0506400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:25060794:25063403:1 gene:Os08g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 257 description:Serine/threonine protein kinase domain containing protein. (Os08t0506400-01)
Sequence	ATGGCGGCAGCTGCGCGGGCGGCGGCGGTGGCGGTGGTGGTGGTGGTGGTGGTGCTCGGC GTGGAGGTGGCGGCTGCGCTGAACACGGACGGGCTGGCGCTTCTTGCGCTCAAGTTCGCG GTGTCGGAGGATCCCAATGGCGCGCTCTCGACGTGGAGGGACGCCGACAACGACCCCTGC GGCTGGTCGGGCGTCACCTGCGTCGACGGCGGTGGCGGCAGGGTCGCCGGCGTGGAGCTC GCCAACTTCTCGCTCGCGGGCTACCTCCCATCCGAGCTGTCGCTGCTGTCCGAGCTGGTG ACGCTGTCCCTGCCCTACAACCAGCTCGCCGGCCAGATCCCGGTCGCCATCACGGCGCTG CAGAAGCTCGCGGCGCTCGACCTCGCCCACAACCTCCTCTCTGGCCAGGTTCCGGCGGGG ATTGGGCGGCTCGTGTCGCTGTCCCGCCTCGATTTGTCCTCCAACCAGCTCAACGGCTCG CTGCCGCCGGCGATCGCCGGGCTTCCTCGTCTCTCTGGGGTTCTCAACCTGAGCTACAAC CATTTCACCGGCGGGATCCCGCCGGAGTTCGGCGGCATTCCGGTGGCGGTGAGCCTTGAC CTCCGCGGGAACGACCTCGCCGGCGAGATCCCGCAGGTGGGGTCCCTCGTCAACCAGGGC CCGACCGCCTTCGACGACAACCCGAGGCTCTGCGGGTTTCCGCTCAAGGTGGAGTGCGCC GGTGAGAAGGAAGATCCAAGAATCCCCGAGGCGAATGGTGGCATGAACCCCGGCGCGGCG GCGGCGGTCGGGAGGCCACCGAGGCGCCGGTCGTCGCCGACGGTGCCCGTTCTTGCTGCC ATTGTGGTGGTTGCCATCGTCGCCGGGGTGATCCTGCAGTGGCAGTGCCGGCGGCGGTGC GCGGCGGCGACGGCGAGGGACGAGGAGAAGGAGTCGGCGAAGGATAAGAGCGGGGCGGTG ACGCTGGCCGGCAGCGAGGAGCGGCGCAGCGGCGGGGAGGAAGGGGAGGTGTTCGTGGCG GTGGACGACGGGTTCGGGATGGAGCTGGAGGAGCTGCTCCGCGCGTCCGCGTTCGTCGTC GGGAAGAGCCGCGGCGGCATCGTGTACCGCGTCGTCCCGGGCCACGGCCCCGCCGTCGCC GTCCGCCGCCTCAGCGAGCCCGACGACGGCGACGGCGGCTCCGACTCCGGGTGGCGCCGG CGCCGCGCGTTCGAGACCGAGGCCGCCGCCATCGGCCGCGCGCGCCACCCCAACGTCGCG CGCCTCCGCGCCTACTACTACGCGCCCGACGAGAAGCTTCTCATCTACGACTACCTCTCC AATGGCTCCCTCCACTCCGCTCTCCACGGTGGCCCGACGGCGTCGCCGACGCCATTGCCG TGGTCGATGAGGCTGTCCATCGTGCAGGGCGCGGCGAGGGGGCTGGCATACCTGCACGAG TGCAGCCCACGCCGGTACGTGCACGGGTGCATCAAGTCATCCAAGATCCTGCTCGACGAC GAGCTCCGCGCCCACGTCTCCGGCTTCGGCCTCGCCCGCCTCGTCGCCGGCGGCGCGCAC AAGGCGGCGGCGGCGCAGTCGAAGAAGCTGGGCGGCGCGGCGTGCGCGCTGCGCGGCGGG GGCGGGGCGCTGGCGTACGTCGCGCCGGAGCTCCGCACGCCCGGCGGCGCGGCCGCCGCG GCGACGCAGAAGGGCGACGTGTTCGCGCTCGGCGTCGTGCTGCTGGAGGCGGTGACCGGG CGCGAGCCGACGGAGGGCGAGGGCGGGCTGGAGCTGGAGGCGTGGGTGCGCCGCGCCTTC AAGGAGGAGCGGCCGCTGTCGGAGGTGGTCGACCCGACGCTGCTCGGCGAGGTGCACGCC AAGAAGCAGGTGCTCGCCGTCTTCCATGTCGCCCTCGGCTGCACCGAGCCCGACGCCGAG CTGCGCCCCCGCATGCGCGCCGTCGCCGAGAGCCTCGACCGGATCAACGCCTAA

Peptide Sequence

PEP ID	Os08t0506400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:25060794:25063403:1 gene:Os08g0506400 transcript:Os08t0506400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 257 description:Serine/threonine protein kinase domain containing protein. (Os08t0506400-01)
Sequence	MAAAARAAAVAVVVVVVVLGVEVAAALNTDGLALLALKFAVSEDPNGALSTWRDADNDPC GWSGVTCVDGGGGRVAGVELANFSLAGYLPSELSLLSELVTLSLPYNQLAGQIPVAITAL QKLAALDLAHNLLSGQVPAGIGRLVSLSRLDLSSNQLNGSLPPAIAGLPRLSGVLNLSYN HFTGGIPPEFGGIPVAVSLDLRGNDLAGEIPQVGSLVNQGPTAFDDNPRLCGFPLKVECA GEKEDPRIPEANGGMNPGAAAAVGRPPRRRSSPTVPVLAAIVVVAIVAGVILQWQCRRRC AAATARDEEKESAKDKSGAVTLAGSEERRSGGEEGEVFVAVDDGFGMELEELLRASAFVV GKSRGGIVYRVVPGHGPAVAVRRLSEPDDGDGGSDSGWRRRRAFETEAAAIGRARHPNVA RLRAYYYAPDEKLLIYDYLSNGSLHSALHGGPTASPTPLPWSMRLSIVQGAARGLAYLHE CSPRRYVHGCIKSSKILLDDELRAHVSGFGLARLVAGGAHKAAAAQSKKLGGAACALRGG GGALAYVAPELRTPGGAAAAATQKGDVFALGVVLLEAVTGREPTEGEGGLELEAWVRRAF KEERPLSEVVDPTLLGEVHAKKQVLAVFHVALGCTEPDAELRPRMRAVAESLDRINA

Transcript Sequence

Transcript ID	Os08t0506400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:25060794:25063403:1 gene:Os08g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 257 description:Serine/threonine protein kinase domain containing protein. (Os08t0506400-01)
Sequence	GTAAATTGGTAGCTTCGGAAGCGAGCGGCCACTTCCGTCGCAATGGCGGCAGCTGCGCGG GCGGCGGCGGTGGCGGTGGTGGTGGTGGTGGTGGTGCTCGGCGTGGAGGTGGCGGCTGCG CTGAACACGGACGGGCTGGCGCTTCTTGCGCTCAAGTTCGCGGTGTCGGAGGATCCCAAT GGCGCGCTCTCGACGTGGAGGGACGCCGACAACGACCCCTGCGGCTGGTCGGGCGTCACC TGCGTCGACGGCGGTGGCGGCAGGGTCGCCGGCGTGGAGCTCGCCAACTTCTCGCTCGCG GGCTACCTCCCATCCGAGCTGTCGCTGCTGTCCGAGCTGGTGACGCTGTCCCTGCCCTAC AACCAGCTCGCCGGCCAGATCCCGGTCGCCATCACGGCGCTGCAGAAGCTCGCGGCGCTC GACCTCGCCCACAACCTCCTCTCTGGCCAGGTTCCGGCGGGGATTGGGCGGCTCGTGTCG CTGTCCCGCCTCGATTTGTCCTCCAACCAGCTCAACGGCTCGCTGCCGCCGGCGATCGCC GGGCTTCCTCGTCTCTCTGGGGTTCTCAACCTGAGCTACAACCATTTCACCGGCGGGATC CCGCCGGAGTTCGGCGGCATTCCGGTGGCGGTGAGCCTTGACCTCCGCGGGAACGACCTC GCCGGCGAGATCCCGCAGGTGGGGTCCCTCGTCAACCAGGGCCCGACCGCCTTCGACGAC AACCCGAGGCTCTGCGGGTTTCCGCTCAAGGTGGAGTGCGCCGGTGAGAAGGAAGATCCA AGAATCCCCGAGGCGAATGGTGGCATGAACCCCGGCGCGGCGGCGGCGGTCGGGAGGCCA CCGAGGCGCCGGTCGTCGCCGACGGTGCCCGTTCTTGCTGCCATTGTGGTGGTTGCCATC GTCGCCGGGGTGATCCTGCAGTGGCAGTGCCGGCGGCGGTGCGCGGCGGCGACGGCGAGG GACGAGGAGAAGGAGTCGGCGAAGGATAAGAGCGGGGCGGTGACGCTGGCCGGCAGCGAG GAGCGGCGCAGCGGCGGGGAGGAAGGGGAGGTGTTCGTGGCGGTGGACGACGGGTTCGGG ATGGAGCTGGAGGAGCTGCTCCGCGCGTCCGCGTTCGTCGTCGGGAAGAGCCGCGGCGGC ATCGTGTACCGCGTCGTCCCGGGCCACGGCCCCGCCGTCGCCGTCCGCCGCCTCAGCGAG CCCGACGACGGCGACGGCGGCTCCGACTCCGGGTGGCGCCGGCGCCGCGCGTTCGAGACC GAGGCCGCCGCCATCGGCCGCGCGCGCCACCCCAACGTCGCGCGCCTCCGCGCCTACTAC TACGCGCCCGACGAGAAGCTTCTCATCTACGACTACCTCTCCAATGGCTCCCTCCACTCC GCTCTCCACGGTGGCCCGACGGCGTCGCCGACGCCATTGCCGTGGTCGATGAGGCTGTCC ATCGTGCAGGGCGCGGCGAGGGGGCTGGCATACCTGCACGAGTGCAGCCCACGCCGGTAC GTGCACGGGTGCATCAAGTCATCCAAGATCCTGCTCGACGACGAGCTCCGCGCCCACGTC TCCGGCTTCGGCCTCGCCCGCCTCGTCGCCGGCGGCGCGCACAAGGCGGCGGCGGCGCAG TCGAAGAAGCTGGGCGGCGCGGCGTGCGCGCTGCGCGGCGGGGGCGGGGCGCTGGCGTAC GTCGCGCCGGAGCTCCGCACGCCCGGCGGCGCGGCCGCCGCGGCGACGCAGAAGGGCGAC GTGTTCGCGCTCGGCGTCGTGCTGCTGGAGGCGGTGACCGGGCGCGAGCCGACGGAGGGC GAGGGCGGGCTGGAGCTGGAGGCGTGGGTGCGCCGCGCCTTCAAGGAGGAGCGGCCGCTG TCGGAGGTGGTCGACCCGACGCTGCTCGGCGAGGTGCACGCCAAGAAGCAGGTGCTCGCC GTCTTCCATGTCGCCCTCGGCTGCACCGAGCCCGACGCCGAGCTGCGCCCCCGCATGCGC GCCGTCGCCGAGAGCCTCGACCGGATCAACGCCTAATCCGGCCATCTCTCCACCATCCTA ATCGAGCTCAAAACACTACTCCTACAAGCTAAAGCCTGTGTCACTTGCAGTAACCACCAT TAGCTTACAAGAACTTCAAATTCTGTAGATTATTACTGTTAATCGCCGCCAATGCGAGGT TTGAGATGGCAAAACGAAGCAAGAATCATCAGGATCATTCGCTGATCTGCTCCAGTAGGC AGTAGTAGTGGACACTCTTCTTTAGCTGCATCATCGGCTGCAAGTCTGCAACCTCTGCAG AAGTGTAATCGATTGATCCCTTCCAAACAATTGTATCTGCCGTTTTCTTTTTCTCCTCTT GTGTTTTTGGCATCATGGCATGTCCTGTTTATGCTTTTGTGGCTGAAAAAAAAATTCTCC GCTTTCTTGGGGTCACAAGCTTGGATTGGAGAACGGCGAGCACAATGTTGTCATCTTCAG CTTTGGCACAGTTGACCCTGAAAAGATGCGACAATGACACTGACGAGAGCGTTGCATCCA TTTAGCC