Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0504600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24938716:24946837:1 gene:Os08g0504600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0504600-01);Similar to RNA recognition motif family protein. (Os08t0504600-02)
Sequence	ATGGAGGCGGAGGATGCCGCCGGCGGCGGCGGCGACGGAGGCCGGTACTTCAAGGCCGAC CTCACCGGCGCCGGCGTCGTCCAGCTCAGCGAGCGCGTGCGGGAGAAGCTGCGGGAGTTC GTGGACGACTACACCAACAACACCCTCGTGGAGTACGTCATTTTGTTGCTCGAAGGTGGA AAGCGCAAAGATGAGGCCATCAAGGAGCTTGATGTATTTCTGGGAAAGGATAGTCGCGCC TTTATTTCCTGGTTGTGGGATCATTTATCTGTAAATTTGCACCTTTATGTGCAAACACAA GAACAACTGCAGGTGGATAATAAGGATGACGAAGCCCCAAATGAACTACCTGGAGAACAG AAATCGTCAGAGTTGCAGTTGAGAAGCAAAGATCAAACTCATCCTGAGTGTGTAAGTGAA CCCAGTACAACCAGAAGTCGGACTAAAAGGGATTGGAAAGGAATTGGTCGGGAGGGTAAT GAAAACTTTCCACTTAGAAGTGTACTGAAGGATATTTTGCATGGTGAGGAGAAAAGGTCG CAAAAGGTTAATGAAATACGACATCCCCCATCGTCTAATCAACGGAATGGCAGAAAGCGT GACAGGGATGACGAACCGCAACAAATAAAGAGAGACTTGCCTTTGCGCCGTGACGTTGGT GCCTCCTGCCGTCTTCTAAAGTTTGCTGTTCGAGATGCTGTGAAAGCTGTACAGCAAACC AGCAGCTCTACGGAACCATCTTCTAAGCGCCTACGTTCTGTGGTTTCCACATCATCTGCA GACAGCCTGCATGGTAAAAGAATAGAAACATCTACAGAGGGCCACCTGTATGACAAAAAG CCAGAAAGAACTAGGCAAATTCTTCAAGTACCTGGAGCTGCTTTAGCTCTCAGAGCTGCC GCAGAGGCTGCTGCAGATTCTACCAAAGTTAGATCTACTGGAAGCGTGTTTAGTCGATTA GGCCAAGGGAATGCTGTGAATCAGACACCCCGTTCTCGTGAACAGCAGAGAGATTACGAA GATTTCAAACCAGCTACAACTGCAGATGATCATGATTCTGATCGATACGATAATGATGAT GAGATATCCGGAGACATAACATTAGAAGATGGGGAAGCTGAAATGAATGTTGATTCTACA TCTGATGATGATGTTAGCAGAGATGATGGAATCACTAGATATGGAAGTTCCGATTCACAA GTAGCTGCTTACCCTTCAGTTGTGGAGAAGAAAGATGTTTTCGTGAAATGCAGTGTTGAA CCAGAGACCAGTACAATGAGGCATTCAAACTTGATTAAGGAGGAGCAACCAGGTTCTTTG TCAGTAATAAGTATGAGCAAAACTGTGGTTGTCCCAGTTAATGCCAACAATCTGGAACCT TCCAATTATGAGACACCAAAAGATGTTCATGTTGTAGAGAAAACGGACATTACACCCATG AATGCTACTGTTACCTCTCTGACTAGTAATATCAAAGAACTAGCTCATGGAGAAGTCCAA AAGGATTCACAGCGATCTGCAATTGCATCATCTGTTACGAGTTCATATAGCACTGCACAC CCAACTGAGGACGCAGACTCTAGAACCCTCTATGTTAGCAATGTTCATTTTGGTGCCACC AAGGACGCGCTATCTCGCCATTTCAACAAGTTTGGTGCGGTGCTCAAAGTAGTTATTGTT ACTAATGCAGCAACAGGGCAGCCAACAGGATCTGCTTACGTAGAATTTTTACATAAAGAA TCAGCTGAACGTGCTCTTTCATTGAATGGAACATCATTCATGGCACGCATCCTCAAGGTT GTCAGGCGAAGTTCTCATGAAGCTGCACATTTTTATGGTTGGCCTGGTGGTGGGCGAACA TCAATGTATGCCAGGCATGGTAGAATGGCATACCCAAGGGGTGGCCTCCCTGGTAGCACC TTCAGAGGGCGTGCTCCAATGATAGCTGGTGCTAGAAGTTTACAATGGAAACGGGAGCCT TCAGTTACTGATTCAAATACAGGTGCAACCGTGGCACTGCCTTCTGCTGAACAGGTGCTT CCTCCTGCCACATAG

Peptide Sequence

PEP ID	Os08t0504600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24938716:24946837:1 gene:Os08g0504600 transcript:Os08t0504600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0504600-01);Similar to RNA recognition motif family protein. (Os08t0504600-02)
Sequence	MEAEDAAGGGGDGGRYFKADLTGAGVVQLSERVREKLREFVDDYTNNTLVEYVILLLEGG KRKDEAIKELDVFLGKDSRAFISWLWDHLSVNLHLYVQTQEQLQVDNKDDEAPNELPGEQ KSSELQLRSKDQTHPECVSEPSTTRSRTKRDWKGIGREGNENFPLRSVLKDILHGEEKRS QKVNEIRHPPSSNQRNGRKRDRDDEPQQIKRDLPLRRDVGASCRLLKFAVRDAVKAVQQT SSSTEPSSKRLRSVVSTSSADSLHGKRIETSTEGHLYDKKPERTRQILQVPGAALALRAA AEAAADSTKVRSTGSVFSRLGQGNAVNQTPRSREQQRDYEDFKPATTADDHDSDRYDNDD EISGDITLEDGEAEMNVDSTSDDDVSRDDGITRYGSSDSQVAAYPSVVEKKDVFVKCSVE PETSTMRHSNLIKEEQPGSLSVISMSKTVVVPVNANNLEPSNYETPKDVHVVEKTDITPM NATVTSLTSNIKELAHGEVQKDSQRSAIASSVTSSYSTAHPTEDADSRTLYVSNVHFGAT KDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMARILKV VRRSSHEAAHFYGWPGGGRTSMYARHGRMAYPRGGLPGSTFRGRAPMIAGARSLQWKREP SVTDSNTGATVALPSAEQVLPPAT

Transcript Sequence

Transcript ID	Os08t0504600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24938716:24946837:1 gene:Os08g0504600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0504600-01);Similar to RNA recognition motif family protein. (Os08t0504600-02)
Sequence	CTCGTTGCCTCCCCTCCCTGCCTACCCCCATCTCCACCTCCGCCTCCACGCGTCGCCGCC GCCGCCGCCGCCGCCGCCGCCGCCGTCCGGGCAGTCGACCGCTGCGGCGCCGTCGGAGCT CCCCGGGCCCCGTGGATGAGAGCGGCGCGGATAAGGTCGCCGCGGGCCCGCTTCGTCTGC ACCCGTCTCGGCCCCGGGACCCCACTGGGCTGGATCTAGGTTTGGCGAGGGGGGTTCTGG AAGCCTCCGCCGCGATGGAGGCGGAGGATGCCGCCGGCGGCGGCGGCGACGGAGGCCGGT ACTTCAAGGCCGACCTCACCGGCGCCGGCGTCGTCCAGCTCAGCGAGCGCGTGCGGGAGA AGCTGCGGGAGTTCGTGGACGACTACACCAACAACACCCTCGTGGAGTACGTCATTTTGT TGCTCGAAGGTGGAAAGCGCAAAGATGAGGCCATCAAGGAGCTTGATGTATTTCTGGGAA AGGATAGTCGCGCCTTTATTTCCTGGTTGTGGGATCATTTATCTGTAAATTTGCACCTTT ATGTGCAAACACAAGAACAACTGCAGGTGGATAATAAGGATGACGAAGCCCCAAATGAAC TACCTGGAGAACAGAAATCGTCAGAGTTGCAGTTGAGAAGCAAAGATCAAACTCATCCTG AGTGTGTAAGTGAACCCAGTACAACCAGAAGTCGGACTAAAAGGGATTGGAAAGGAATTG GTCGGGAGGGTAATGAAAACTTTCCACTTAGAAGTGTACTGAAGGATATTTTGCATGGTG AGGAGAAAAGGTCGCAAAAGGTTAATGAAATACGACATCCCCCATCGTCTAATCAACGGA ATGGCAGAAAGCGTGACAGGGATGACGAACCGCAACAAATAAAGAGAGACTTGCCTTTGC GCCGTGACGTTGGTGCCTCCTGCCGTCTTCTAAAGTTTGCTGTTCGAGATGCTGTGAAAG CTGTACAGCAAACCAGCAGCTCTACGGAACCATCTTCTAAGCGCCTACGTTCTGTGGTTT CCACATCATCTGCAGACAGCCTGCATGGTAAAAGAATAGAAACATCTACAGAGGGCCACC TGTATGACAAAAAGCCAGAAAGAACTAGGCAAATTCTTCAAGTACCTGGAGCTGCTTTAG CTCTCAGAGCTGCCGCAGAGGCTGCTGCAGATTCTACCAAAGTTAGATCTACTGGAAGCG TGTTTAGTCGATTAGGCCAAGGGAATGCTGTGAATCAGACACCCCGTTCTCGTGAACAGC AGAGAGATTACGAAGATTTCAAACCAGCTACAACTGCAGATGATCATGATTCTGATCGAT ACGATAATGATGATGAGATATCCGGAGACATAACATTAGAAGATGGGGAAGCTGAAATGA ATGTTGATTCTACATCTGATGATGATGTTAGCAGAGATGATGGAATCACTAGATATGGAA GTTCCGATTCACAAGTAGCTGCTTACCCTTCAGTTGTGGAGAAGAAAGATGTTTTCGTGA AATGCAGTGTTGAACCAGAGACCAGTACAATGAGGCATTCAAACTTGATTAAGGAGGAGC AACCAGGTTCTTTGTCAGTAATAAGTATGAGCAAAACTGTGGTTGTCCCAGTTAATGCCA ACAATCTGGAACCTTCCAATTATGAGACACCAAAAGATGTTCATGTTGTAGAGAAAACGG ACATTACACCCATGAATGCTACTGTTACCTCTCTGACTAGTAATATCAAAGAACTAGCTC ATGGAGAAGTCCAAAAGGATTCACAGCGATCTGCAATTGCATCATCTGTTACGAGTTCAT ATAGCACTGCACACCCAACTGAGGACGCAGACTCTAGAACCCTCTATGTTAGCAATGTTC ATTTTGGTGCCACCAAGGACGCGCTATCTCGCCATTTCAACAAGTTTGGTGCGGTGCTCA AAGTAGTTATTGTTACTAATGCAGCAACAGGGCAGCCAACAGGATCTGCTTACGTAGAAT TTTTACATAAAGAATCAGCTGAACGTGCTCTTTCATTGAATGGAACATCATTCATGGCAC GCATCCTCAAGGTTGTCAGGCGAAGTTCTCATGAAGCTGCACATTTTTATGGTTGGCCTG GTGGTGGGCGAACATCAATGTATGCCAGGCATGGTAGAATGGCATACCCAAGGGGTGGCC TCCCTGGTAGCACCTTCAGAGGGCGTGCTCCAATGATAGCTGGTGCTAGAAGTTTACAAT GGAAACGGGAGCCTTCAGTTACTGATTCAAATACAGGTGCAACCGTGGCACTGCCTTCTG CTGAACAGGTGCTTCCTCCTGCCACATAGGGGAGATGAATTATAGTTTATATGATGAGAA CCAAATTGGTGCCTAGCCCATCATACAGCATATTAGAATCAGCATAATAAGCTTGGAAGA TGGTTTATGGAAAAAAATGCTGCTTTGTAAAAAAGGCTAAAAGCAGGAAAATACAAAAAA AGAGAAGAAAATAAGAAAAGAGGAAGGAGTTTGGAGCCAGAATTTGATAAACCACCATGC TGATACTTGGAGGTGGTTGTATTGGAGATCAATGAACTGTCGTCACATTGAGCAAACAGT TTTCTTCAGTCATCTGAAAGGACTTGCTGAGATTTGAAATAACTTCCATGGATGAGGATC AATTGTCAAATAGAGCATTTGAGGGCTAGTTTTTGGACATGGCATTTAGTCGGTAGTCTG GGCTCTTCATCATTGTAAGCTCCGACTGTACAGCAGTCTATCTATTTGTACTCTTCTTAG AACCAGTCCCTTTCCCAACAAAAAAAACAGAAAAAAAGAAAAGGAAAAACATCTCTCTTT GTTTCTTTTTTGTTTTTTTATTGAACATAGTACTGTTTTATACTTTTATTCCTTAATGTA TTGATATAATTTTTTAGTT