Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0504500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24935623:24936616:1 gene:Os08g0504500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich domain containing protein. (Os08t0504500-01)
Sequence

ATGGCCATGCTCCTCGCCTCCCTCCTCTCCCCTTCCCCTCTTCCCACCACCACCACCTCT
TCCACGTCGCCGAGGGCTGTCAGGCTCGCGCCGGCGAAGCCGCTCGCCGCCACTCTCGCA
GCGGTGGCCGCGGCGGGGCTCCTGGCGCTGTCCCCGGCCACGGCGGCGGCGGCGGCGGCC
GGGGAGGCGGAGTTCAAGGTGTACTACGGCACGGCGGCGAGCGCGGCGAACTACGGCGGG
TACGGCGGGAACGCGAGCAAGAAGGACGCGGCGGAGTACGTGTACGAGGTGCCGGAGGGG
TGGAAGGAGAGGCTGGTGTCCAAGGTGGAGAAGGGCACCAACGGCACGGACAGCGAGTTC
TTCAACCCGCGGAAGCGGTCGGAGCGGGAGTACCTCACGTTCCTCGCCGGGTTCCGGGCG
CTGGCGCCGGTGGGCGCCGTGCTCGACAACCTCGCGCTCTCCGACGTCGGGCTCCAGGAC
CAGATCGCGTCGGCGGACGGCGTGCTGTCGACGGAGCGGAGGGACGGCGGCGGGCAGCTC
TACTACGAGTACGAGATCGCCGGCGCCGGCGCGCACAGCCTCATCTCCGTGACGTGCGCG
CGGAACAAGCTGTACGCGCACTTCGTGACGGCGCCCAACCCGGAGTGGAGCCGCGACGAG
GCCGTCCTCCGCCGGCTGCACCAGTCGTTCAAGACCGTCGACCCCGCCAGACCGCCGCCG
GCTAGCTCCTAG

Peptide Sequence

PEP ID

Os08t0504500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24935623:24936616:1 gene:Os08g0504500 transcript:Os08t0504500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich domain containing protein. (Os08t0504500-01)
Sequence

MAMLLASLLSPSPLPTTTTSSTSPRAVRLAPAKPLAATLAAVAAAGLLALSPATAAAAAA
GEAEFKVYYGTAASAANYGGYGGNASKKDAAEYVYEVPEGWKERLVSKVEKGTNGTDSEF
FNPRKRSEREYLTFLAGFRALAPVGAVLDNLALSDVGLQDQIASADGVLSTERRDGGGQL
YYEYEIAGAGAHSLISVTCARNKLYAHFVTAPNPEWSRDEAVLRRLHQSFKTVDPARPPP
ASS

Transcript Sequence

Transcript ID

Os08t0504500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24935623:24936616:1 gene:Os08g0504500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich domain containing protein. (Os08t0504500-01)
Sequence

ACAAAAAACCACACAAGAAAACGCGCGCCAACCACCGCATCTTCCCCTCCCCCCGGCCTC
TCCGACGTCGACCATGGCCATGCTCCTCGCCTCCCTCCTCTCCCCTTCCCCTCTTCCCAC
CACCACCACCTCTTCCACGTCGCCGAGGGCTGTCAGGCTCGCGCCGGCGAAGCCGCTCGC
CGCCACTCTCGCAGCGGTGGCCGCGGCGGGGCTCCTGGCGCTGTCCCCGGCCACGGCGGC
GGCGGCGGCGGCCGGGGAGGCGGAGTTCAAGGTGTACTACGGCACGGCGGCGAGCGCGGC
GAACTACGGCGGGTACGGCGGGAACGCGAGCAAGAAGGACGCGGCGGAGTACGTGTACGA
GGTGCCGGAGGGGTGGAAGGAGAGGCTGGTGTCCAAGGTGGAGAAGGGCACCAACGGCAC
GGACAGCGAGTTCTTCAACCCGCGGAAGCGGTCGGAGCGGGAGTACCTCACGTTCCTCGC
CGGGTTCCGGGCGCTGGCGCCGGTGGGCGCCGTGCTCGACAACCTCGCGCTCTCCGACGT
CGGGCTCCAGGACCAGATCGCGTCGGCGGACGGCGTGCTGTCGACGGAGCGGAGGGACGG
CGGCGGGCAGCTCTACTACGAGTACGAGATCGCCGGCGCCGGCGCGCACAGCCTCATCTC
CGTGACGTGCGCGCGGAACAAGCTGTACGCGCACTTCGTGACGGCGCCCAACCCGGAGTG
GAGCCGCGACGAGGCCGTCCTCCGCCGGCTGCACCAGTCGTTCAAGACCGTCGACCCCGC
CAGACCGCCGCCGGCTAGCTCCTAGTCCTAGCTAGCCATTGTTCGCCGCCGCCGGCCGGC
CGGAGTCCACGACTTGTCTCGATCGAGTGGAGAGCTAGCAGCTGGGCGAAACAATTTCTA
GTAGCTTTGCTGCCCGAGATGTAATTAAAGCAGTTTTGTATAAATTATGGATCTACTATA
CGCGTAATCAAACATTGTCCTGTAAATTATTTTC