Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0503200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24865941:24872043:1 gene:Os08g0503200 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0503200-01)
Sequence	ATGACGACGAGCAGCTGGGGTGGTGGTGGTGGTGGTGGCGGTGGCGCCGTGCGGCTGTGG TGCTGCGGCCTCCTCCTGATGCTCCTTTCAGGCGGAGGCGGGGGCGGAGGCGCCGCCGCG CAGAGGCCCCCGGCCTACAAGACCCTCTCCGGTAACGCGCCCATCGTCATAGCTGAAGGT GGCTTTTCAGGAGTGTTTCCTGATTCCAGCAAAAATGCCTACGTTTTTGCCTTGTCTTCT ACCTCGGGTGACACCGTTTTGTGGTGCAATGTGCAACTAACCAAGGATGGTGTCGGAATT TGCCTCCGGGATTTACTTATGGACAACTGCACCAGTATAAGCCAAGCTTACCGAGCGGGA AAGAAGGCATACCTTGTCAACGGCGAAGAAAAAAAAGGATGGTTTCCTATTGACTATACC ATGTCTTCGCTGCAAAGTGTTATCTTAACACAGGCAATTTGGTCTCGCACCGACAAGTTT GATTTTGCATTCCTTCCCATTCTTCCTGTTACCAATGTGATAGATTTGGCCAAGCCATCT TCTGTTTGGCTGAATATTGAGCACGATATTTTCTACAGACAGCATGGTTTGAATATGACA AAATACATCCTTTCAATTCCGAAGGGTGGTTCTGTGCAGTATATCTCATCACCTGAATTG GGTTTTCTCCAAAGTATATCAGGAAGAGTTAATCGCAAAACGAAGCTAGTGTTTCGTTTT CTTGATGCAACCAGTTCTGATCCTTCTTCAAACCAAACATATGGTTCTCTGTTGAGTAAT TTGACATTTATTAAGACTGTTGCCTCTGGTATAATGGTTCCCAAGGAGTACATTTGGCCA GTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCA GGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGC TATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGA GTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAAT GTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGA GACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTC ATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAAT CTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAA GATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGT AGCGATTTGAGACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCA GTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGAT AAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTA GGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAA ACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTG AAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCT TCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAA TCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTC CGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCT TGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATT GATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACC GGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAG CTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCA TCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCT GCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTC ATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGA

Peptide Sequence

PEP ID	Os08t0503200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24865941:24872043:1 gene:Os08g0503200 transcript:Os08t0503200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0503200-01)
Sequence	MTTSSWGGGGGGGGGAVRLWCCGLLLMLLSGGGGGGGAAAQRPPAYKTLSGNAPIVIAEG GFSGVFPDSSKNAYVFALSSTSGDTVLWCNVQLTKDGVGICLRDLLMDNCTSISQAYRAG KKAYLVNGEEKKGWFPIDYTMSSLQSVILTQAIWSRTDKFDFAFLPILPVTNVIDLAKPS SVWLNIEHDIFYRQHGLNMTKYILSIPKGGSVQYISSPELGFLQSISGRVNRKTKLVFRF LDATSSDPSSNQTYGSLLSNLTFIKTVASGIMVPKEYIWPVTTNNYIQPAKSIVRDAHSA GLEIYASDFANDRIIPYNYSYDPLEEYLHFVGSDNFSVDGVLSEFPLTAAAAIGCFTNLN VSSKTDHGSPLIISHNGASGDYPDCTDLAYQKAVDDGADVIDCSIQMTSDGVPVCMSSIN LFETTNVQRTPFSNRASIFKDIQPTPGIFTFNLTWADISSSDLRPKISSPESIYYLVRNP VHKNAGNFFRLSDFLTFAKDKDLSGIMIIIKNAVFMANSLGFDVVDSVTKALSDAGYNNQ TTKAKEVMIQSEDSAVLVNLKQLETKYKLVYTLPSTIGDASASSLVDVKKFADAVIVDRE SIFPESQGFIMKETNLVKDLRSAGLAIYAQVFRNEFVSPPWDFFSDVTVEINSYVQSVNI DGIITDFPKTVRRYKMNSCTGLGVNMPSYMNPAEIGGLAQLLNGSQAQPPALAPMPVLNS SDVTEPPFPSAAPKNAPGGAANGSTPAPGASPSGSQAAAVMRAGILPMVTALFASLLI

Transcript Sequence

Transcript ID	Os08t0503200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24865941:24872043:1 gene:Os08g0503200 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os08t0503200-01)
Sequence	GTGCCAAACTGCCAATATTCTCTCTGCCAAACAAAAAAAAAGGAAAAAAAACCACCGCTT TTCGCAGTGCGCTTCTTCTCTCTCCCTCTCTGCTCTGCTCTTCCTGAGCTCCGCGGCAAG GAAGCTTCTGGAAGGTTCTGCGGGATGACGACGAGCAGCTGGGGTGGTGGTGGTGGTGGT GGCGGTGGCGCCGTGCGGCTGTGGTGCTGCGGCCTCCTCCTGATGCTCCTTTCAGGCGGA GGCGGGGGCGGAGGCGCCGCCGCGCAGAGGCCCCCGGCCTACAAGACCCTCTCCGGTAAC GCGCCCATCGTCATAGCTGAAGGTGGCTTTTCAGGAGTGTTTCCTGATTCCAGCAAAAAT GCCTACGTTTTTGCCTTGTCTTCTACCTCGGGTGACACCGTTTTGTGGTGCAATGTGCAA CTAACCAAGGATGGTGTCGGAATTTGCCTCCGGGATTTACTTATGGACAACTGCACCAGT ATAAGCCAAGCTTACCGAGCGGGAAAGAAGGCATACCTTGTCAACGGCGAAGAAAAAAAA GGATGGTTTCCTATTGACTATACCATGTCTTCGCTGCAAAGTGTTATCTTAACACAGGCA ATTTGGTCTCGCACCGACAAGTTTGATTTTGCATTCCTTCCCATTCTTCCTGTTACCAAT GTGATAGATTTGGCCAAGCCATCTTCTGTTTGGCTGAATATTGAGCACGATATTTTCTAC AGACAGCATGGTTTGAATATGACAAAATACATCCTTTCAATTCCGAAGGGTGGTTCTGTG CAGTATATCTCATCACCTGAATTGGGTTTTCTCCAAAGTATATCAGGAAGAGTTAATCGC AAAACGAAGCTAGTGTTTCGTTTTCTTGATGCAACCAGTTCTGATCCTTCTTCAAACCAA ACATATGGTTCTCTGTTGAGTAATTTGACATTTATTAAGACTGTTGCCTCTGGTATAATG GTTCCCAAGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCA ATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGAT AGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGT AGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCT ATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATT ATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAA GCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTT CCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTC AGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAAT CTCACTTGGGCTGATATTAGCAGTAGCGATTTGAGACCCAAGATATCTTCCCCAGAGAGT ATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCT GACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAAT GCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTA AGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAA GATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACT CTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCT GATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAG GAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTC CGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAAT AGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGA AGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCT GCGGAAATTGGCGGCCTAGCGCAGCTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTG GCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCG CCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCG TCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTC TTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCA GAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTG TGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCT GCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTA CTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCT TCAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGA