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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0502600-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24827219:24827794:1 gene:Os08g0502600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os08t0502600-01)
Sequence

ATGAGCGTGGAGATCGTGGACGGGAGCACGGTGCGGAGCTTCGTGGACGACGAGGCCGCC
TTCAACGCGTCGGTGGACGGGCGCTTCGCGGCGCTGGACGCCGACCGCGACGGCGTCCTC
TCCTACGCCGACATGTCCGGGGAGCTCATGGCGCTCCGCGTGCTGGACACCCACTTCGGC
GTCGACGACGGCCACGGCGGCGCCGACGACGGGCTCTACCGCGGCCTCTTCGCCCGCTTC
GACCGCGACGGCGACGGCAAGGTCGGCCTCCACGAGTTCCGCGCCGAGATGAAGGAGGTC
ATGCTCGTCGTCGCCAATGGCCTCGGCTTCCTCCCCGTCCAGATGGTCGTCGAGGATGGC
AGCTTCCTCAAGGTGGCCGTCGACAGGGAGCTCGCCAAGGCCGCCTAA

Peptide Sequence

PEP ID

Os08t0502600-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24827219:24827794:1 gene:Os08g0502600 transcript:Os08t0502600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os08t0502600-01)
Sequence

MSVEIVDGSTVRSFVDDEAAFNASVDGRFAALDADRDGVLSYADMSGELMALRVLDTHFG
VDDGHGGADDGLYRGLFARFDRDGDGKVGLHEFRAEMKEVMLVVANGLGFLPVQMVVEDG
SFLKVAVDRELAKAA

Transcript Sequence

Transcript ID

Os08t0502600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24827219:24827794:1 gene:Os08g0502600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os08t0502600-01)
Sequence

ACTCACACAACAAACCACCCCCAAGATCAAGAACAACAACAACAACAACAACATTTGTCA
AGATGAGCGTGGAGATCGTGGACGGGAGCACGGTGCGGAGCTTCGTGGACGACGAGGCCG
CCTTCAACGCGTCGGTGGACGGGCGCTTCGCGGCGCTGGACGCCGACCGCGACGGCGTCC
TCTCCTACGCCGACATGTCCGGGGAGCTCATGGCGCTCCGCGTGCTGGACACCCACTTCG
GCGTCGACGACGGCCACGGCGGCGCCGACGACGGGCTCTACCGCGGCCTCTTCGCCCGCT
TCGACCGCGACGGCGACGGCAAGGTCGGCCTCCACGAGTTCCGCGCCGAGATGAAGGAGG
TCATGCTCGTCGTCGCCAATGGCCTCGGCTTCCTCCCCGTCCAGATGGTCGTCGAGGATG
GCAGCTTCCTCAAGGTGGCCGTCGACAGGGAGCTCGCCAAGGCCGCCTAATTCAATAACC
TAGCTAGCTAATTAACCACATTGAACTAGCCCACGACGATTAATTTGAGTACTTTGTTTG
GTAAATTTTATTGAATTTGGTGTTAATTTGGATTTG