Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0500800-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24726948:24731218:1 gene:Os08g0500800 gene_biotype:protein_coding transcript_biotype:protein_coding description:WLM domain containing protein. (Os08t0500800-01)
Sequence

ATGGAAGAGAAGAGAATAGCTCGGATTTCGGTCACTTGGAGAGGCAGACAGCTCGATGTC
GATGCAGACCCGAGCTGTACGGTGAAGGAATTCGGGCAACTTTTGCAGGATTTGACTAGT
GTTAACCCAGAGACATTGAAGCTTATTGTTCCGCAGTCTACAAACAAAGGCTCCAAGCTG
ATCACACCGTTTTCCGACCCTCATTCAGTTTTGACATTGAAAGAAGCTGCTATTAGTGAT
GGGAAGCCTATTAGAATGATGGGTGTTTTTAATGATGAAATCGAGGAAGTATCGGACAAT
GGCAAAAGAACAGATCTACGGATAATTGGATTTGAGGAGGAAGAACAACGGCTGAGGCAA
CGAACATCAGGCAGGCCCCAAGTTCCACTCAAACTTCCACAGGGCCAATACATCTTCTGT
GATTTTCGGACACTTCACTTACCTGGGATTGAGTTGAATCCCCCACCTTCAGAAGCTCTG
AAAAGAATGCACATGCTAGCATGTGACCCAGGCATAATTGCGATCATGAACAAGCATAGA
TGGCGAGTGGGAATCATGACTGAAATGGCACCAGTAGGGTATGTAGGCGTCAGTCCAAAA
TGCATTCTAGGCTTCAATAAGAACATGGGAGAGGAAATATCCCTTCGCCTACGAACTGAT
GACTTGAAAGGATTTAGGAAATATGAAAGTATCAAGAGAACTCTACTCCATGAACTTGCA
CACATGGTGCACTCCGAGCATGATGCAAATTTTTTTGCTCTTAATAAGCAGTTGAATGAT
GAAGCAGCTTCCTTGGACTGGACCAAGTCAAGAGGTCATGTGCTGAGTGGTCGCAAAATC
TTCGATTCCTATGAAGACGAATTTGTTCTGGAGCCAGACAGTGTTGTTGTTGGCCACAAA
CTTGGAGGAGGATCCAGTTCACTGGCAAGTGCTCGTGTGTTGTCTGGGTCTGCTGCTTAT
AAGCGTTTTTTGAATGCATCAGCGGATTTAGAGAGTTCTAAAGACAGCGTTACTATACCT
GGAAATGAAATTCTTGTGCCTAACACAAAATTTGAGCCTGATCCAGATGATGTTGGTCAA
GATTTTTCTCAGGACAACACTAAGGTGGAGCCAGACCCAGATGATAATGATGACATGAAC
GTGGATGTAGGGACTGGGGCATCTTGGTCCTCAGTTTCTAGATCATTTACAGAACAAGAT
ACCATCAGTCACTCAGAGCCTGACCCTGATGATATTCACCAGCAAAGCACTGCTGGTTGC
CTAGAACCTGACCCTGATGATTCCTCAAATGTTGATATTCTTAGCCAGGAGTTGACGATT
GATGGGAAGCAGAATGGAGAACCTGATCCTGACGATAATGGTACTAGCAAATTTATTCCC
GAACCTGTAAACAAGATGGAAGTAGAGACTGAATTGGGAAGTAACTTCGCAGTTCAGAAT
TCTGAACCTGATCCTGATGATTCCTCAAATGCTATTCTGAATAAGAAGCTGGGAACTGAC
AGGTCTGATGAAACTACATGCGAAGCTGTTGTAGAAGAATGTGTAAACAAGATGGAAGTG
GAGACTGAACAGAGCAGAAACTCGACAATGTCAAAATCTGAGCCTGATCCTGATGATCAT
GCTGCTAATTCAAACATCAGTGAGCTCCAGAGGATCGAAGAACCAGTGGCAGCCCTCTGT
GCACGCCTTCAGAAGGCCATTGAAATGCTTCGCTCACAAGCAACACCTACAGAGGCAACT
TCTGCTCTTCAAACACTCTTTAAGATCATCAAGAATGTGATAGAGCACCCACATGATATC
AAGTACAGGAGACTGCGTAAGTCCAATCCACAGTTCCAAAGGAGTGTGGCGAACTACAAA
GCTGCAATGGAGGTCCTTGAACTGATTGGTTTCTGTGAGGATGTCGTCTCGGATGAGATT
GGTCGTGCAGAGACTTACTTGGTATTGAAAAGGAACGATCCTGGCTTGCTGTGGCTTGCA
AAGGCCTCTCTTGAAGTTTCCATGGCCTGA

Peptide Sequence

PEP ID

Os08t0500800-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24726948:24731218:1 gene:Os08g0500800 transcript:Os08t0500800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WLM domain containing protein. (Os08t0500800-01)
Sequence

MEEKRIARISVTWRGRQLDVDADPSCTVKEFGQLLQDLTSVNPETLKLIVPQSTNKGSKL
ITPFSDPHSVLTLKEAAISDGKPIRMMGVFNDEIEEVSDNGKRTDLRIIGFEEEEQRLRQ
RTSGRPQVPLKLPQGQYIFCDFRTLHLPGIELNPPPSEALKRMHMLACDPGIIAIMNKHR
WRVGIMTEMAPVGYVGVSPKCILGFNKNMGEEISLRLRTDDLKGFRKYESIKRTLLHELA
HMVHSEHDANFFALNKQLNDEAASLDWTKSRGHVLSGRKIFDSYEDEFVLEPDSVVVGHK
LGGGSSSLASARVLSGSAAYKRFLNASADLESSKDSVTIPGNEILVPNTKFEPDPDDVGQ
DFSQDNTKVEPDPDDNDDMNVDVGTGASWSSVSRSFTEQDTISHSEPDPDDIHQQSTAGC
LEPDPDDSSNVDILSQELTIDGKQNGEPDPDDNGTSKFIPEPVNKMEVETELGSNFAVQN
SEPDPDDSSNAILNKKLGTDRSDETTCEAVVEECVNKMEVETEQSRNSTMSKSEPDPDDH
AANSNISELQRIEEPVAALCARLQKAIEMLRSQATPTEATSALQTLFKIIKNVIEHPHDI
KYRRLRKSNPQFQRSVANYKAAMEVLELIGFCEDVVSDEIGRAETYLVLKRNDPGLLWLA
KASLEVSMA

Transcript Sequence

Transcript ID

Os08t0500800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24726948:24731218:1 gene:Os08g0500800 gene_biotype:protein_coding transcript_biotype:protein_coding description:WLM domain containing protein. (Os08t0500800-01)
Sequence

CCTTCCCTCCGAGTGCCGTACGGCCGCTGCCGCCTTCTGGAACATTCGCTTGCCTCCGCC
AAAAAAAAAAAAAAAAAATCCCTCCTCCCCTCTCCCCTCGAGTGGGGCGCAGCCGCCTCG
CTCGTCTTCCTTCCTCCTCCACCGCCGCGCGTGCGCGAGTGCGCAGCCGCCATCGCCGTG
CGCTTCTCTGCCTCCCGATCTGCGGTGCGACCGGTGTGATCGCGGAGCGGCGGCCGACGA
GAAGGATTTTTTTGAGGGAGGGGGGCGAGTGGTGCGACGCCGCTGACCTCCTTCAATTCC
ACCTGCCCCAATCTCGGTTGGGAATCGAATCGAAAGGAATAAGATGGAAGAGAAGAGAAT
AGCTCGGATTTCGGTCACTTGGAGAGGCAGACAGCTCGATGTCGATGCAGACCCGAGCTG
TACGGTGAAGGAATTCGGGCAACTTTTGCAGGATTTGACTAGTGTTAACCCAGAGACATT
GAAGCTTATTGTTCCGCAGTCTACAAACAAAGGCTCCAAGCTGATCACACCGTTTTCCGA
CCCTCATTCAGTTTTGACATTGAAAGAAGCTGCTATTAGTGATGGGAAGCCTATTAGAAT
GATGGGTGTTTTTAATGATGAAATCGAGGAAGTATCGGACAATGGCAAAAGAACAGATCT
ACGGATAATTGGATTTGAGGAGGAAGAACAACGGCTGAGGCAACGAACATCAGGCAGGCC
CCAAGTTCCACTCAAACTTCCACAGGGCCAATACATCTTCTGTGATTTTCGGACACTTCA
CTTACCTGGGATTGAGTTGAATCCCCCACCTTCAGAAGCTCTGAAAAGAATGCACATGCT
AGCATGTGACCCAGGCATAATTGCGATCATGAACAAGCATAGATGGCGAGTGGGAATCAT
GACTGAAATGGCACCAGTAGGGTATGTAGGCGTCAGTCCAAAATGCATTCTAGGCTTCAA
TAAGAACATGGGAGAGGAAATATCCCTTCGCCTACGAACTGATGACTTGAAAGGATTTAG
GAAATATGAAAGTATCAAGAGAACTCTACTCCATGAACTTGCACACATGGTGCACTCCGA
GCATGATGCAAATTTTTTTGCTCTTAATAAGCAGTTGAATGATGAAGCAGCTTCCTTGGA
CTGGACCAAGTCAAGAGGTCATGTGCTGAGTGGTCGCAAAATCTTCGATTCCTATGAAGA
CGAATTTGTTCTGGAGCCAGACAGTGTTGTTGTTGGCCACAAACTTGGAGGAGGATCCAG
TTCACTGGCAAGTGCTCGTGTGTTGTCTGGGTCTGCTGCTTATAAGCGTTTTTTGAATGC
ATCAGCGGATTTAGAGAGTTCTAAAGACAGCGTTACTATACCTGGAAATGAAATTCTTGT
GCCTAACACAAAATTTGAGCCTGATCCAGATGATGTTGGTCAAGATTTTTCTCAGGACAA
CACTAAGGTGGAGCCAGACCCAGATGATAATGATGACATGAACGTGGATGTAGGGACTGG
GGCATCTTGGTCCTCAGTTTCTAGATCATTTACAGAACAAGATACCATCAGTCACTCAGA
GCCTGACCCTGATGATATTCACCAGCAAAGCACTGCTGGTTGCCTAGAACCTGACCCTGA
TGATTCCTCAAATGTTGATATTCTTAGCCAGGAGTTGACGATTGATGGGAAGCAGAATGG
AGAACCTGATCCTGACGATAATGGTACTAGCAAATTTATTCCCGAACCTGTAAACAAGAT
GGAAGTAGAGACTGAATTGGGAAGTAACTTCGCAGTTCAGAATTCTGAACCTGATCCTGA
TGATTCCTCAAATGCTATTCTGAATAAGAAGCTGGGAACTGACAGGTCTGATGAAACTAC
ATGCGAAGCTGTTGTAGAAGAATGTGTAAACAAGATGGAAGTGGAGACTGAACAGAGCAG
AAACTCGACAATGTCAAAATCTGAGCCTGATCCTGATGATCATGCTGCTAATTCAAACAT
CAGTGAGCTCCAGAGGATCGAAGAACCAGTGGCAGCCCTCTGTGCACGCCTTCAGAAGGC
CATTGAAATGCTTCGCTCACAAGCAACACCTACAGAGGCAACTTCTGCTCTTCAAACACT
CTTTAAGATCATCAAGAATGTGATAGAGCACCCACATGATATCAAGTACAGGAGACTGCG
TAAGTCCAATCCACAGTTCCAAAGGAGTGTGGCGAACTACAAAGCTGCAATGGAGGTCCT
TGAACTGATTGGTTTCTGTGAGGATGTCGTCTCGGATGAGATTGGTCGTGCAGAGACTTA
CTTGGTATTGAAAAGGAACGATCCTGGCTTGCTGTGGCTTGCAAAGGCCTCTCTTGAAGT
TTCCATGGCCTGAATTGTTTCACCAAGCAATCTCCTATTGCTTCTGTATACCTGTAAATC
ATTTTCATTACTGTTGTGGGGATGCTCATATGCTGCTCTTAGGCAAATGATGTAGTATGG
TCTTCCTACACGATGATTGTTTGTATATGGAAACACCAAAATGGTCTATACTGTCTGTCA
ACACACTTCATGATTTCTCATCAAATATACAAACTATAGATAAATTACCTGGC