Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0500200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24695687:24698899:-1 gene:Os08g0500200 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR, N-terminal domain containing protein. (Os08t0500200-01);Similar to predicted protein. (Os08t0500200-02)
Sequence	ATGGGGATGAAATTTCTGAACAAGAAGGGGTGGCACACGGGGAGCCTTCGGAACATCGAG CGCGTGTGGGTGGCCGAGGAGAAGGAGAAGGAGGAGCAGCGGAAGATCCAGGAGCTGAAG AAGCAGCAGGACGAGGAGCGGGAGAAGGCCGCCTTCCGCAAGCTCCAGGAGGACGCCGGC CTCAAGCCGAGGCAAGAGAGATTGGACTTCCTCTACGAGTCAGGGTTGGCTGTTGGCAAG GGGAGCTCCGAGGGATTCCAAGCGCTGCAACCATCTGCCCCAGCAGCTGCTGCCGCCGCC TCTTCTTCTGCCCAAGCGAGTGCCGGCTCTTCCAAGGCAGCTGCTCCAGGTGCATTATTT GAGGATAAGCCCCAATCTGCAAATGATGCATGGAGAAAACTCCACACTGATCCTCTTCTA CTAATAAGGCAGCGGGAGCAGGATGCCATTGCAAGAATAAAAAATAATCCAATCAAGATG GCTGAGATAAAGAAATCAGTGGAAGCTGAGAAAAAGCAAAAGGAAGAAAAGAAAGAGAAG AGAAAGCACAAGAAGCGCCATCATCACAAATCAAAGAGTAAGAGGCATCACTCAAGTGAG AACTCAGATTCAGAGGAAAGTGATGGCAGGGATGAGAGAAGAAAGAGTGTTCAGGCCTCA GAGCATAAGAGAGAAGAGAAAAGGTCAAGACATGATAAGAAGGATCACGGACAAGATTCA GAAGACGATGAACGAAGGAAAAGACGGCATGCAACGTCAGAAGATGATGAGCCAAGGAAG TCACAGAAGGAGAAGAAAGGACAGAGGGAAGATTCAGAAGATGACAAGCCAAAGAAGTCA AGGAAAGACCGCAGAAGACATGATTCAGAAGATGAAGAACCAAGGAGAAAACACCAGAGG TCAGAAGATGATGAACCAAAAAGAAGACAATCTGAGGTTTCCGGAGATGATGAACCAAGG AGAAGAAGGCAGGAGATGCCAAAGCATGACGAATATTCACGACGGGGTCGTTCGGATGCT GATGATAGGAGAGGGAGACACTATACTCCGTCAGATGATAGGAGAGGGAGACACTATACT CCGTCAGACCACAACAGTGCTTATCCAAAGCACGACAGTTCAGATTCAAGGCATAGGCGA CCGGAATATGGACGCGGCAATTCCACTTCTGAACTAGGTTCAGAAGGCCAACGAAGGCAG GAAAGCCAGCAGGGCAGGAACGGCCCTACATTCAACCGTCGACGGGGTGTCCAGCACATG TCAGAGGAAGAAAGGGAAGCTCGACTTCGTCAAATGCAGGCTGACGCAGAGGTCCACGAA GAACAAAGATGGAGCAGGCTCAAGAAAGCTGCAGACGACGATGCCAAGGAGGCGGCATCT GTGAACGCAAACCAATTCAGAGGGAAGAACTTCTTGGAAGAAGAAAAGAAGAGCATATTT GGAACCGAGAAGGGCGGAAGCGCCACGATCGAAGAGAGCATCCGGCGCCGTGCGTATTAT TCGCAGCGTAATGCCCATGAGAGCAATGCATTCAGGCGGTGA

Peptide Sequence

PEP ID	Os08t0500200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24695687:24698899:-1 gene:Os08g0500200 transcript:Os08t0500200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR, N-terminal domain containing protein. (Os08t0500200-01);Similar to predicted protein. (Os08t0500200-02)
Sequence	MGMKFLNKKGWHTGSLRNIERVWVAEEKEKEEQRKIQELKKQQDEEREKAAFRKLQEDAG LKPRQERLDFLYESGLAVGKGSSEGFQALQPSAPAAAAAASSSAQASAGSSKAAAPGALF EDKPQSANDAWRKLHTDPLLLIRQREQDAIARIKNNPIKMAEIKKSVEAEKKQKEEKKEK RKHKKRHHHKSKSKRHHSSENSDSEESDGRDERRKSVQASEHKREEKRSRHDKKDHGQDS EDDERRKRRHATSEDDEPRKSQKEKKGQREDSEDDKPKKSRKDRRRHDSEDEEPRRKHQR SEDDEPKRRQSEVSGDDEPRRRRQEMPKHDEYSRRGRSDADDRRGRHYTPSDDRRGRHYT PSDHNSAYPKHDSSDSRHRRPEYGRGNSTSELGSEGQRRQESQQGRNGPTFNRRRGVQHM SEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLEEEKKSIF GTEKGGSATIEESIRRRAYYSQRNAHESNAFRR

Transcript Sequence

Transcript ID	Os08t0500200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24695687:24698899:-1 gene:Os08g0500200 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR, N-terminal domain containing protein. (Os08t0500200-01);Similar to predicted protein. (Os08t0500200-02)
Sequence	GAGGGCTCGAGGCGGCGGCTATCTCCCTCCTTTCTTCTCTTCTCTCTCGTTTCGAAGCCG ACGCGTCGCGGAGGAGGAGGAGGAAGAGGGCAAAGCCGCCGCGGGGATTTCTAGGGTTAG GGTTTCGAGGTTGAGAGGGAAGGAGGGAGAGAAGAGCGGGTATCAGCCATGGGGATGAAA TTTCTGAACAAGAAGGGGTGGCACACGGGGAGCCTTCGGAACATCGAGCGCGTGTGGGTG GCCGAGGAGAAGGAGAAGGAGGAGCAGCGGAAGATCCAGGAGCTGAAGAAGCAGCAGGAC GAGGAGCGGGAGAAGGCCGCCTTCCGCAAGCTCCAGGAGGACGCCGGCCTCAAGCCGAGG CAAGAGAGATTGGACTTCCTCTACGAGTCAGGGTTGGCTGTTGGCAAGGGGAGCTCCGAG GGATTCCAAGCGCTGCAACCATCTGCCCCAGCAGCTGCTGCCGCCGCCTCTTCTTCTGCC CAAGCGAGTGCCGGCTCTTCCAAGGCAGCTGCTCCAGGTGCATTATTTGAGGATAAGCCC CAATCTGCAAATGATGCATGGAGAAAACTCCACACTGATCCTCTTCTACTAATAAGGCAG CGGGAGCAGGATGCCATTGCAAGAATAAAAAATAATCCAATCAAGATGGCTGAGATAAAG AAATCAGTGGAAGCTGAGAAAAAGCAAAAGGAAGAAAAGAAAGAGAAGAGAAAGCACAAG AAGCGCCATCATCACAAATCAAAGAGTAAGAGGCATCACTCAAGTGAGAACTCAGATTCA GAGGAAAGTGATGGCAGGGATGAGAGAAGAAAGAGTGTTCAGGCCTCAGAGCATAAGAGA GAAGAGAAAAGGTCAAGACATGATAAGAAGGATCACGGACAAGATTCAGAAGACGATGAA CGAAGGAAAAGACGGCATGCAACGTCAGAAGATGATGAGCCAAGGAAGTCACAGAAGGAG AAGAAAGGACAGAGGGAAGATTCAGAAGATGACAAGCCAAAGAAGTCAAGGAAAGACCGC AGAAGACATGATTCAGAAGATGAAGAACCAAGGAGAAAACACCAGAGGTCAGAAGATGAT GAACCAAAAAGAAGACAATCTGAGGTTTCCGGAGATGATGAACCAAGGAGAAGAAGGCAG GAGATGCCAAAGCATGACGAATATTCACGACGGGGTCGTTCGGATGCTGATGATAGGAGA GGGAGACACTATACTCCGTCAGATGATAGGAGAGGGAGACACTATACTCCGTCAGACCAC AACAGTGCTTATCCAAAGCACGACAGTTCAGATTCAAGGCATAGGCGACCGGAATATGGA CGCGGCAATTCCACTTCTGAACTAGGTTCAGAAGGCCAACGAAGGCAGGAAAGCCAGCAG GGCAGGAACGGCCCTACATTCAACCGTCGACGGGGTGTCCAGCACATGTCAGAGGAAGAA AGGGAAGCTCGACTTCGTCAAATGCAGGCTGACGCAGAGGTCCACGAAGAACAAAGATGG AGCAGGCTCAAGAAAGCTGCAGACGACGATGCCAAGGAGGCGGCATCTGTGAACGCAAAC CAATTCAGAGGGAAGAACTTCTTGGAAGAAGAAAAGAAGAGCATATTTGGAACCGAGAAG GGCGGAAGCGCCACGATCGAAGAGAGCATCCGGCGCCGTGCGTATTATTCGCAGCGTAAT GCCCATGAGAGCAATGCATTCAGGCGGTGAAATCCCTGAAGCAGAGCAGCAGCTCAGGCG GCCTGACCTCGTTGATGTCAGTGTTCTGCATTTGCTTTAGCTTCTTTTGCCTTTCTGGTG TATTGTTCCTTGTTTAGTATGGAAGAATTTTTGAATGTTGTACAACGCATTGTCCAGATG TTTTGAATCCATATGTTTTAGTAACAATTTTTGCCAAAATGAAAATCCTACATGTGTATT ATAGAGGGTTTGCTAACACAAAGGTATGATT