Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0500100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24685286:24694485:1 gene:Os08g0500100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 5 description:Similar to Peroxisomal targeting signal 1 receptor short form. (Os08t0500100-01);Similar to Peroxisomal targeting sequence 1 receptor (Fragment). (Os08t0500100-02)
Sequence	ATGGCGATGCGGCACCTCATCACCGGGCAGGGCAACTGCGCGCCGGACGGGGCGTCGTCG TCCAACCCCTTCGGGAACCTCGCCAACGCCATCTTCGGCCAGTCGTCCAAGGCGCAGTCA ATAAAGGAACTTCCAGGGTCTGCAGTTAATGTTCCAACAACATCTGAATTAGGGACAGCT GCTCCCTTATCGACCATCCCTGGTTCAGAGAATGAGTTCAAGCAAGATCAACTGCCACTT GCACGGGGCGCTGATTTCATCCGTGGGGGTCCTTCTCATGATTGGGTTGAATCTTTTCGG CCTCCAGGACTCCCAGAATTTGCTGTGCCAGATGCACAGCTTAAAGAATTTGAGCAAATT TTTAACAGCACAGGGCCAACCTTTGGACCACCAGTCATGGATGGTCCACCACAAAGGGTC TTATCTGGTGTCCTACGTTCTTTCCTAGCAAGTGGTCAAGCTGGTGTGCCATTTCAACCT GTTCCAGTACCAGCGCTTGGTTTGTCTGAAAGTGACAAGCAATGTATACGTGATCGTAGT TGCATTATGGCACGCCACATTTTGGCTGACCAGCCTGAAGAATATATCCAAGCACAGGTA AACACATTGCTGCATTCACTTGATATCGACAGTAATTATCGAATGAAAGGACCCATGCAC GGACCATACCCAGAGATGGAGGAGTATTGGAATCAGTCCCAAAGCGCCATGAGATCTGGT CCAATGCACAATGCTGCAGACAAATGGATAACTGAGTTTGGCAAGCAAAATAATAACCCT GAAGAGTGGGCTCATTCTTTTGAGCAGCAATATGGTTCCAATGGTTGGGCCTCTGAGTTT GAACAGCATCAATCTCAGATGGCCATGACAGGAGGAATGAATATGGCAAACCTGGCAGCC ATGGAACAATCTCGTATGCTTGCACAGACATTAGCTAGTAATAATGACCCAAAATTTCAG ATGTCACAAGGAGCAGATAAGTGGGCTAGTGAGTTCTCTACTGAGTATAATCAGGGTGGC CTCAACGAGAACTGGATTGATGAGTTCTCCAAAATGCGTGTTGACGATGAATGGGCAGAA GAGTTCAGTGGAGGAACATTTGGTGAAAGCTCTGCTGATCCATGGGTAGATGAGTTCCAG AACCAATTATCAGCTTCCAAACAGAATTCTGGTGCATCTCGAGGAGTTTATGTTTTTTCA GACATGAACCCATACGTTGGTCACCCTAATCCAATGCAGGAAGGCCAGGAACTGTTCCGC AAAGGCCTCCTAAGTGAAGCTGTTCTTGCTTTAGAGGCTGAAGTTTTGAAGAATCCTGAT AATGCTGAAGGTTGGAGACTACTTGGAGTAACACATGCTGAAAATGATGATGACCAACAG GCAATCGCAGCAATGATGCGTGCACAAGAAGCTGATCCAACAAACCTGGAAGTTCTTCTT GCACTTGGTGTCAGTCACACGAATGAGTTGGAGCAGGGAGAAGCATTAAGATATCTTCAT AGGTGGCTTCAGAATCACCCCAAATATGGGGGTATCGCCCCTCCACAGCCAACTGATTCA CCTTATGGTCCTGATGTTATTAGATTGTTTAATGAGGCTGCCCAAATGTCACCTGAGGAT GCTGATGTCCATATAGTTCTAGGAGTCTTGTACAACCTATCAAGAGAATATGATAAAGCT ATAGCTGCTTTCAAGACAGCGCTGCAGCTGAAACCACAAGACTATTCTCTCTGGAATAAG CTAGGTGCGACCCAAGCAAACAGCATCCAGAGTGCTGATGCAATATTGGCCTATCAACAG GCTCTGGACTTAAAGCCCAATTATGTGCGTGCATGGGCTAATATGGGGATTAGCTATGCC AACCAGGGATTGTATGAAGACTCTATTCGATACTATGTACGGGCGGTTGCTATGAATCCA AAAGCTGACAATGCCTGGCAGTACTTGCGGATTTCTCTTAGTAACGCTTCACGAGCTGAC ATGATCGCTGCATGTGATTCACGCAACCTTGACGTTCTTCAGAAAGAGTTTCCCCTGTGA

Peptide Sequence

PEP ID	Os08t0500100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24685286:24694485:1 gene:Os08g0500100 transcript:Os08t0500100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 5 description:Similar to Peroxisomal targeting signal 1 receptor short form. (Os08t0500100-01);Similar to Peroxisomal targeting sequence 1 receptor (Fragment). (Os08t0500100-02)
Sequence	MAMRHLITGQGNCAPDGASSSNPFGNLANAIFGQSSKAQSIKELPGSAVNVPTTSELGTA APLSTIPGSENEFKQDQLPLARGADFIRGGPSHDWVESFRPPGLPEFAVPDAQLKEFEQI FNSTGPTFGPPVMDGPPQRVLSGVLRSFLASGQAGVPFQPVPVPALGLSESDKQCIRDRS CIMARHILADQPEEYIQAQVNTLLHSLDIDSNYRMKGPMHGPYPEMEEYWNQSQSAMRSG PMHNAADKWITEFGKQNNNPEEWAHSFEQQYGSNGWASEFEQHQSQMAMTGGMNMANLAA MEQSRMLAQTLASNNDPKFQMSQGADKWASEFSTEYNQGGLNENWIDEFSKMRVDDEWAE EFSGGTFGESSADPWVDEFQNQLSASKQNSGASRGVYVFSDMNPYVGHPNPMQEGQELFR KGLLSEAVLALEAEVLKNPDNAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPTNLEVLL ALGVSHTNELEQGEALRYLHRWLQNHPKYGGIAPPQPTDSPYGPDVIRLFNEAAQMSPED ADVHIVLGVLYNLSREYDKAIAAFKTALQLKPQDYSLWNKLGATQANSIQSADAILAYQQ ALDLKPNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNPKADNAWQYLRISLSNASRAD MIAACDSRNLDVLQKEFPL

Transcript Sequence

Transcript ID	Os08t0500100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24685286:24694485:1 gene:Os08g0500100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEROXIN 5 description:Similar to Peroxisomal targeting signal 1 receptor short form. (Os08t0500100-01);Similar to Peroxisomal targeting sequence 1 receptor (Fragment). (Os08t0500100-02)
Sequence	TCCCCTCCCACAAAGCCACCGCGACGCTGCACGACTCCTCTCTCTCTCCTCGACCTCGAC CTCGACCGGAACGCCTCTCGCCGGCGGCGGCGGCGGAGATGGCGATGCGGCACCTCATCA CCGGGCAGGGCAACTGCGCGCCGGACGGGGCGTCGTCGTCCAACCCCTTCGGGAACCTCG CCAACGCCATCTTCGGCCAGTCGTCCAAGGCGCAGTCAATAAAGGAACTTCCAGGGTCTG CAGTTAATGTTCCAACAACATCTGAATTAGGGACAGCTGCTCCCTTATCGACCATCCCTG GTTCAGAGAATGAGTTCAAGCAAGATCAACTGCCACTTGCACGGGGCGCTGATTTCATCC GTGGGGGTCCTTCTCATGATTGGGTTGAATCTTTTCGGCCTCCAGGACTCCCAGAATTTG CTGTGCCAGATGCACAGCTTAAAGAATTTGAGCAAATTTTTAACAGCACAGGGCCAACCT TTGGACCACCAGTCATGGATGGTCCACCACAAAGGGTCTTATCTGGTGTCCTACGTTCTT TCCTAGCAAGTGGTCAAGCTGGTGTGCCATTTCAACCTGTTCCAGTACCAGCGCTTGGTT TGTCTGAAAGTGACAAGCAATGTATACGTGATCGTAGTTGCATTATGGCACGCCACATTT TGGCTGACCAGCCTGAAGAATATATCCAAGCACAGGTAAACACATTGCTGCATTCACTTG ATATCGACAGTAATTATCGAATGAAAGGACCCATGCACGGACCATACCCAGAGATGGAGG AGTATTGGAATCAGTCCCAAAGCGCCATGAGATCTGGTCCAATGCACAATGCTGCAGACA AATGGATAACTGAGTTTGGCAAGCAAAATAATAACCCTGAAGAGTGGGCTCATTCTTTTG AGCAGCAATATGGTTCCAATGGTTGGGCCTCTGAGTTTGAACAGCATCAATCTCAGATGG CCATGACAGGAGGAATGAATATGGCAAACCTGGCAGCCATGGAACAATCTCGTATGCTTG CACAGACATTAGCTAGTAATAATGACCCAAAATTTCAGATGTCACAAGGAGCAGATAAGT GGGCTAGTGAGTTCTCTACTGAGTATAATCAGGGTGGCCTCAACGAGAACTGGATTGATG AGTTCTCCAAAATGCGTGTTGACGATGAATGGGCAGAAGAGTTCAGTGGAGGAACATTTG GTGAAAGCTCTGCTGATCCATGGGTAGATGAGTTCCAGAACCAATTATCAGCTTCCAAAC AGAATTCTGGTGCATCTCGAGGAGTTTATGTTTTTTCAGACATGAACCCATACGTTGGTC ACCCTAATCCAATGCAGGAAGGCCAGGAACTGTTCCGCAAAGGCCTCCTAAGTGAAGCTG TTCTTGCTTTAGAGGCTGAAGTTTTGAAGAATCCTGATAATGCTGAAGGTTGGAGACTAC TTGGAGTAACACATGCTGAAAATGATGATGACCAACAGGCAATCGCAGCAATGATGCGTG CACAAGAAGCTGATCCAACAAACCTGGAAGTTCTTCTTGCACTTGGTGTCAGTCACACGA ATGAGTTGGAGCAGGGAGAAGCATTAAGATATCTTCATAGGTGGCTTCAGAATCACCCCA AATATGGGGGTATCGCCCCTCCACAGCCAACTGATTCACCTTATGGTCCTGATGTTATTA GATTGTTTAATGAGGCTGCCCAAATGTCACCTGAGGATGCTGATGTCCATATAGTTCTAG GAGTCTTGTACAACCTATCAAGAGAATATGATAAAGCTATAGCTGCTTTCAAGACAGCGC TGCAGCTGAAACCACAAGACTATTCTCTCTGGAATAAGCTAGGTGCGACCCAAGCAAACA GCATCCAGAGTGCTGATGCAATATTGGCCTATCAACAGGCTCTGGACTTAAAGCCCAATT ATGTGCGTGCATGGGCTAATATGGGGATTAGCTATGCCAACCAGGGATTGTATGAAGACT CTATTCGATACTATGTACGGGCGGTTGCTATGAATCCAAAAGCTGACAATGCCTGGCAGT ACTTGCGGATTTCTCTTAGTAACGCTTCACGAGCTGACATGATCGCTGCATGTGATTCAC GCAACCTTGACGTTCTTCAGAAAGAGTTTCCCCTGTGAGTCCAAACATTCTAGGCATTGC ACTTGCTCCTCAGGCCCGCCCCCATGATAAAGGGTACAAGGAAGTAGAGAACTAGCGAAA TGGGGGCTGCACATTTTGGAATGATGAAAGTGCAAAATGGCAGTGGCCGTTGTGTTGTGG TTTTCGGTTCGTGTATACGAATTGTTCATTTTAACAAGGCGCGACATGTATATAAAATTC AAGATGGGCACCCATTCTTCCGTAGGTGTGGGAAACGCAAAGCAGAAGGCAGTTGTCACA TGTAATTCTGTACACAGAGAGGGAAAGAATAAAAGAATATCGAACGAATATGTCAAAAGG AGGCAACACGTTCTTGTAATTTTCTACAGAAAATAAAGTGGTAGCAGGTTTCACTGTTTC AGC