Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0499100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24633503:24637192:1 gene:Os08g0499100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA+ type, core domain containing protein. (Os08t0499100-01)
Sequence	ATGGAGGAAGAGAAGGAGGCTGGGAGCTTTCTTGATGTGCCCAAGGATATCCCCATTGCC GCCACCAAGTCGCTCACCATCCGCACCAATGGCGGATTCAGCAGCAGCTCCGACCGGTCA AACCCCATCTCGCCGGCCATCTCCATCACCCCGCACCTCTACTCGCCGTCGCCGCCGTCC TCCGCGTTCGTGTCGGCGCTGCAGTCGCCGTACATCTCGCCTCGAGTCCTCGAGCCCCCG ACTCCCGCTGCGGCGCCGCCGCCACCGCAGGAAGCGGCGGCGCCGTCGCCGCCGGCGTCC TACTCCAACTCGGAGGACACCGATGCGCCGAGCGCGTCGCGGACGCCGCCGTCCGAGCGC TACGACTCCGGCGGCATCGACCCGGCCACCAAGGTCTCCGACTGCGGCGGCGGCGTGCAG CCGCGCGTGTCGTTCTCGTTCCCCGTGCCGCGGGTGTCCTTCACCCGCGGCTCCGTGGCG TCGCCGTCGTCGAACGCCAAGCTCCGGAGCTGCGACGTGTACATCGGCTACCACGGCAAT GGCAGCCTCGGCCGGTTCTGCAAGTGGCTCAAGTCGGAGCTCGAGCTGCAGGGCATCGCC TCCTTCGTCGCCGACCGGGCCAAGTACTCCGACACGCAGAGCCATGAGATCGCCGACCGG ATCATCTGCTCCGTCGCATTCGGCGTCATAGTCGTCACCATGTCAAGTTTCCTCAATCCG TTCAGCCTCGAGGAGATCAGGTTCTTTGCTCAGAAGAAGAACCTGGTGCCCATACTGTTC GACACCGAGCCACCGGAGATCGCGGGGCTTTTCGACGGCAAATTGGAGGATAAGGAGGGG AAGGAAGCGTTCGAAGGATTGATGCGGTGCCATGAGTTTAAGCTTGAGGCGAATGAGACC AATTGGAGAAGCTGCGTGTCCAAGACGGTCACCTTGCTGCGGTCCAAGCTTGGCAGGAAG AGCATTGCTGAGAAGGAGAGTGAAGGGCCTGAAGGAATGCCTTTTCCGCGGAACCGGCAT TTCGTTGGAAGGGAGAAGGAGCTAAGTGAAATTGAAGGAATGTTCTTCGGTTCCACGGTG GATATCCAAGAGGTTGATTGCCCGAGGGGTTCCGCTGCGAATGACAGATCGAGTGGTGTG TCTGATGGGTTTGCTGATGAGGAGAGTGACACAGTGAGGACATCGAATGCCAGGTATATC AGTTTGGAGATGCGCAAGTGCAAGGAGCCGACATTGGAGGCCTGGATTGATCCAGTTATA GAGTTATCATCGGGTAAAGGGAGAAATCTTCAGAAGCAGAGATCAAAGCACAGGAGGTCA AGGTTTCGGTGCAACAGCAAAGGATATGGCAGTGCCAGTGTGCTCTGCATCACTGGTTCT TCAGGAATTGGCAAGACTGAACTGGCATTGGAATTTGCTTACCGGTATTCACAGCGGTAC AAGATGGTCCTGTGGATTGGAGGTGAAGCTCGGTATTTGAGGCAAAACATACTCAATTTA TCCATGAATTTGGGATTGGACATCAGTGCAGAGGCTGAGAAGGAGAGAGGTAGGATCAGG AGCTTTGAGGAGCAGGAGTTTGATGCTTTTCAGAGGGTGAAGCGGGAGCTGTTCCGCGAC GTGCCGTACTTGCTTGTCATTGATAACCTTGAGAGTGAGAGGGATTGGTGGGAAGGTAAG GATCTCCATGACTTCATCCCTAGGAACACTGGAGCGACACATGTCATTGTGACCACACGT TTACCACGTGTGATTAACCTTGAACCGATGCAACTGCCACAGCTCTCATACAATGATGCC ATGATATTGATAAAGGGGAAGCAGAAGAATGACTATCCGCCTGAGGAAATGGAAGTTCTT AGGAAGCTTGACGAGCGGTTAGGTCGGTTGAGCTTTGGCCTGTGGATCGTTGGTTCACTG CTGTCTGAGCTCATGATTACACCTTCCACTCTGTTTGAGGCTGTCGAGAGAATATCACTG AATGAGAGTTTGTTCCCACTTGGTGCCAATGACGATGGCTTCTGTCGTAACAATTCTTTC CTAATAAAGGTCCTGGTCTTTTGTTTTGCATTGATGGACCGAGCAAAAGGAGGAAGCCTT ACCTCAAAGATGATTATCGCTGGTTCTTGGTTAGCTCCTGCTCCTGTGTCGTCTACGCTA TTAGCTGCAACAGCGAGCAAGCTACCAATGAAAGGCAGTATGCACCTGTTGGGTGAATCC CTGAAGACTGCATTTCTATGCGGCACACATTGCTTTCTAGCTCCACATGGTCGAAAAGCT GAGGTGGAGTCAGCACTCTTACTTGTCAAGCTTGGGCTGGCAAGAAAGGCAACTCGTCAT CCTGGCTGCTGGATCCAGTTCCACCCAATAACACAGCTCTTTGGCAAGATTAGGGGAGGT TTGGCACCAACAACTGCAGCAGTGAACGGCGTAATGAGGGCTGGTAACCCCTCAGTGTAC TCGGACCACTTATGGGCTAGTGCATTCCTTGTGTTTGGTTTCAAGTCTGAACCACCTTCT GTTCAGCTCAAGGCAGTCGACATGGTGCATTTCATAAGGAAGACGGCACTTCCCTTGGCA ATTGACTCCTTCATGACATTCTCACGGTGCGGCTCGGCTTTAGAACTGCTCAAGGTGTGC ACCAATGTCCTTGAGGAGGTGGAGAAGTCTTACGCATCGCGGATCCAGGACCTGAACCGT GGGTCGCTTTGCTGGAGGAAGAAGCTGCAACCGAATCACCGTGTCGATGAGTTTGTCTGG CAGGAAGTGACGCTGCTCAAAGCGACACTGCTCGAGACGAGGGCGAAGCTGTTGCTCCGA GGTGGGCTGTTTGACACCGGCGAAGAATTGTGCAGGACTTGCATTAGCATCCGGACTGTT ATGCTTGGCCATGGTCATGCCCATACACTGGCTGCTCAAGAGACATTGGCAAAGCTGGTC AGATACAGGAGTAAGATTTGA

Peptide Sequence

PEP ID	Os08t0499100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24633503:24637192:1 gene:Os08g0499100 transcript:Os08t0499100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA+ type, core domain containing protein. (Os08t0499100-01)
Sequence	MEEEKEAGSFLDVPKDIPIAATKSLTIRTNGGFSSSSDRSNPISPAISITPHLYSPSPPS SAFVSALQSPYISPRVLEPPTPAAAPPPPQEAAAPSPPASYSNSEDTDAPSASRTPPSER YDSGGIDPATKVSDCGGGVQPRVSFSFPVPRVSFTRGSVASPSSNAKLRSCDVYIGYHGN GSLGRFCKWLKSELELQGIASFVADRAKYSDTQSHEIADRIICSVAFGVIVVTMSSFLNP FSLEEIRFFAQKKNLVPILFDTEPPEIAGLFDGKLEDKEGKEAFEGLMRCHEFKLEANET NWRSCVSKTVTLLRSKLGRKSIAEKESEGPEGMPFPRNRHFVGREKELSEIEGMFFGSTV DIQEVDCPRGSAANDRSSGVSDGFADEESDTVRTSNARYISLEMRKCKEPTLEAWIDPVI ELSSGKGRNLQKQRSKHRRSRFRCNSKGYGSASVLCITGSSGIGKTELALEFAYRYSQRY KMVLWIGGEARYLRQNILNLSMNLGLDISAEAEKERGRIRSFEEQEFDAFQRVKRELFRD VPYLLVIDNLESERDWWEGKDLHDFIPRNTGATHVIVTTRLPRVINLEPMQLPQLSYNDA MILIKGKQKNDYPPEEMEVLRKLDERLGRLSFGLWIVGSLLSELMITPSTLFEAVERISL NESLFPLGANDDGFCRNNSFLIKVLVFCFALMDRAKGGSLTSKMIIAGSWLAPAPVSSTL LAATASKLPMKGSMHLLGESLKTAFLCGTHCFLAPHGRKAEVESALLLVKLGLARKATRH PGCWIQFHPITQLFGKIRGGLAPTTAAVNGVMRAGNPSVYSDHLWASAFLVFGFKSEPPS VQLKAVDMVHFIRKTALPLAIDSFMTFSRCGSALELLKVCTNVLEEVEKSYASRIQDLNR GSLCWRKKLQPNHRVDEFVWQEVTLLKATLLETRAKLLLRGGLFDTGEELCRTCISIRTV MLGHGHAHTLAAQETLAKLVRYRSKI

Transcript Sequence

Transcript ID	Os08t0499100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24633503:24637192:1 gene:Os08g0499100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA+ type, core domain containing protein. (Os08t0499100-01)
Sequence	GGGAAAAGCTGGCCTCTTTTTTAAATTCCAAATCCGGCTCCAGTCTCTCCTTGCCATTTT TTTTCTTGGTTCTTGAAGCTAAAGCCCCTCATCAGCAAGTGGTTCTGCATTTCTGCAGAA AACAATTGATATTATCAGTGGTTTTTCTGTGGCATTGGATTCCTGAAGGATACCTTACCA GAACATGAGGAGCACAAGATCATGCAGTGCATTGGAGATTGCTTGCCAAGGTTTGTGATT TGGTGGTAGCCATGGAGGAAGAGAAGGAGGCTGGGAGCTTTCTTGATGTGCCCAAGGATA TCCCCATTGCCGCCACCAAGTCGCTCACCATCCGCACCAATGGCGGATTCAGCAGCAGCT CCGACCGGTCAAACCCCATCTCGCCGGCCATCTCCATCACCCCGCACCTCTACTCGCCGT CGCCGCCGTCCTCCGCGTTCGTGTCGGCGCTGCAGTCGCCGTACATCTCGCCTCGAGTCC TCGAGCCCCCGACTCCCGCTGCGGCGCCGCCGCCACCGCAGGAAGCGGCGGCGCCGTCGC CGCCGGCGTCCTACTCCAACTCGGAGGACACCGATGCGCCGAGCGCGTCGCGGACGCCGC CGTCCGAGCGCTACGACTCCGGCGGCATCGACCCGGCCACCAAGGTCTCCGACTGCGGCG GCGGCGTGCAGCCGCGCGTGTCGTTCTCGTTCCCCGTGCCGCGGGTGTCCTTCACCCGCG GCTCCGTGGCGTCGCCGTCGTCGAACGCCAAGCTCCGGAGCTGCGACGTGTACATCGGCT ACCACGGCAATGGCAGCCTCGGCCGGTTCTGCAAGTGGCTCAAGTCGGAGCTCGAGCTGC AGGGCATCGCCTCCTTCGTCGCCGACCGGGCCAAGTACTCCGACACGCAGAGCCATGAGA TCGCCGACCGGATCATCTGCTCCGTCGCATTCGGCGTCATAGTCGTCACCATGTCAAGTT TCCTCAATCCGTTCAGCCTCGAGGAGATCAGGTTCTTTGCTCAGAAGAAGAACCTGGTGC CCATACTGTTCGACACCGAGCCACCGGAGATCGCGGGGCTTTTCGACGGCAAATTGGAGG ATAAGGAGGGGAAGGAAGCGTTCGAAGGATTGATGCGGTGCCATGAGTTTAAGCTTGAGG CGAATGAGACCAATTGGAGAAGCTGCGTGTCCAAGACGGTCACCTTGCTGCGGTCCAAGC TTGGCAGGAAGAGCATTGCTGAGAAGGAGAGTGAAGGGCCTGAAGGAATGCCTTTTCCGC GGAACCGGCATTTCGTTGGAAGGGAGAAGGAGCTAAGTGAAATTGAAGGAATGTTCTTCG GTTCCACGGTGGATATCCAAGAGGTTGATTGCCCGAGGGGTTCCGCTGCGAATGACAGAT CGAGTGGTGTGTCTGATGGGTTTGCTGATGAGGAGAGTGACACAGTGAGGACATCGAATG CCAGGTATATCAGTTTGGAGATGCGCAAGTGCAAGGAGCCGACATTGGAGGCCTGGATTG ATCCAGTTATAGAGTTATCATCGGGTAAAGGGAGAAATCTTCAGAAGCAGAGATCAAAGC ACAGGAGGTCAAGGTTTCGGTGCAACAGCAAAGGATATGGCAGTGCCAGTGTGCTCTGCA TCACTGGTTCTTCAGGAATTGGCAAGACTGAACTGGCATTGGAATTTGCTTACCGGTATT CACAGCGGTACAAGATGGTCCTGTGGATTGGAGGTGAAGCTCGGTATTTGAGGCAAAACA TACTCAATTTATCCATGAATTTGGGATTGGACATCAGTGCAGAGGCTGAGAAGGAGAGAG GTAGGATCAGGAGCTTTGAGGAGCAGGAGTTTGATGCTTTTCAGAGGGTGAAGCGGGAGC TGTTCCGCGACGTGCCGTACTTGCTTGTCATTGATAACCTTGAGAGTGAGAGGGATTGGT GGGAAGGTAAGGATCTCCATGACTTCATCCCTAGGAACACTGGAGCGACACATGTCATTG TGACCACACGTTTACCACGTGTGATTAACCTTGAACCGATGCAACTGCCACAGCTCTCAT ACAATGATGCCATGATATTGATAAAGGGGAAGCAGAAGAATGACTATCCGCCTGAGGAAA TGGAAGTTCTTAGGAAGCTTGACGAGCGGTTAGGTCGGTTGAGCTTTGGCCTGTGGATCG TTGGTTCACTGCTGTCTGAGCTCATGATTACACCTTCCACTCTGTTTGAGGCTGTCGAGA GAATATCACTGAATGAGAGTTTGTTCCCACTTGGTGCCAATGACGATGGCTTCTGTCGTA ACAATTCTTTCCTAATAAAGGTCCTGGTCTTTTGTTTTGCATTGATGGACCGAGCAAAAG GAGGAAGCCTTACCTCAAAGATGATTATCGCTGGTTCTTGGTTAGCTCCTGCTCCTGTGT CGTCTACGCTATTAGCTGCAACAGCGAGCAAGCTACCAATGAAAGGCAGTATGCACCTGT TGGGTGAATCCCTGAAGACTGCATTTCTATGCGGCACACATTGCTTTCTAGCTCCACATG GTCGAAAAGCTGAGGTGGAGTCAGCACTCTTACTTGTCAAGCTTGGGCTGGCAAGAAAGG CAACTCGTCATCCTGGCTGCTGGATCCAGTTCCACCCAATAACACAGCTCTTTGGCAAGA TTAGGGGAGGTTTGGCACCAACAACTGCAGCAGTGAACGGCGTAATGAGGGCTGGTAACC CCTCAGTGTACTCGGACCACTTATGGGCTAGTGCATTCCTTGTGTTTGGTTTCAAGTCTG AACCACCTTCTGTTCAGCTCAAGGCAGTCGACATGGTGCATTTCATAAGGAAGACGGCAC TTCCCTTGGCAATTGACTCCTTCATGACATTCTCACGGTGCGGCTCGGCTTTAGAACTGC TCAAGGTGTGCACCAATGTCCTTGAGGAGGTGGAGAAGTCTTACGCATCGCGGATCCAGG ACCTGAACCGTGGGTCGCTTTGCTGGAGGAAGAAGCTGCAACCGAATCACCGTGTCGATG AGTTTGTCTGGCAGGAAGTGACGCTGCTCAAAGCGACACTGCTCGAGACGAGGGCGAAGC TGTTGCTCCGAGGTGGGCTGTTTGACACCGGCGAAGAATTGTGCAGGACTTGCATTAGCA TCCGGACTGTTATGCTTGGCCATGGTCATGCCCATACACTGGCTGCTCAAGAGACATTGG CAAAGCTGGTCAGATACAGGAGTAAGATTTGAGATCATATCTGAAACCCTTGTGAGTTGC TGCAATGTACTGATGTGTATTCCTTTGTTACTGTCTTATAGAGGGTGATCAGAAGTTTTC ATGTCTCGGCATTTCTGAATCTGTGACGCCAACAAGTTTTGTTAGTGATGGTCATATGAT AGCCAAAAGCTTCACGGTGCCATATGAATGTAACTTGAGTCGCTATGTACAGTACAGTTC AGTTACTATTTCATAAAACTTTTAATCTCTTTACTGT