Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0497900-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24581335:24583695:-1 gene:Os08g0497900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0497900-01)
Sequence

ATGCCACCTCCGGCGGCCGATATGGAGAACGGCGCCGTCGGGTCGCCGGCGGCGGAGGTG
GAGGCCGGTGCATCTCCGGGGAGCTCTCCCGTGATAAAGACCAAAGGCCGTGGGCTCCGT
CGATGGCGCCGTATCCCGCGGGAGCAGCGCAAGGAAGGATCAGCCGCCTCCGCCGCCGCC
GGCAGCGGCTCGGCGCAGCTGCACAAGCGGCGGATACCCCTGCCCGGCGGCGCGCCGAGG
GGGAAGCTGCACGAGGTGGTCTTGGAGGAGGAGGAGGAGGAGAGCTCCACCGCCTCCGTC
GAGTCCCGCTTCGTCCCGCCGGCGAAGCTGGATCCGAGCCTCGGCGTGCTGCTCGTCGCC
TCCTCGGGATTCTCCGTCGGCGCGGGCGGCGCCGACTCCGACCACAGCGAGGACCGGAGC
AGCGGCAGCAGGTCCTCCACCGCAGCGAGCGCCCCGCGCCGCCACAACGACCTCTCGCCC
TTCGCCGCCGACAGGGCAGGGCGCTCCTCCCGCGCCGCGCGCGCGCGTGCCGCCGAGGCG
CAGTACTCGCTGCGCTGCTCTAATGCCGTGAACTCCCGGCGGCAATCGATTGCCGGCAAT
GGAATCCACAAGGTTCTTGCCGATCACTGTGATCACGGCGAGGAGACGCCATTGATGGCC
AGAGATTACTGCAATGTGGAGAATGGGAGCGTGGTGGTGAGGAGATTGGCACAGGGGAGT
GTTGATTCGGATGCTGATGCTGCTCAGAGGAGTGTGGGGAACAATGGTGACCTTGGATCA
GGGATGAAGTCGAGTGCTGATCCGTATGCGGAATCGATTTCATTGCTTCAGAGAACGCAA
GAAGCGCTTGAGAATGAGATTAAAATGTTTGCAGTGATCAGTAAAGAGTCAAATGATAAT
TTTGATGGAAACGACGATGATTGGAGTGGTTTAGTCGATCTCGCGGAACCTCTTGAAGGA
ACAAGTCAAAATGTAAAGGATCCTGAGTCCAGACCAGAAGAAGCATCTTACCTTGGTCGG
CTCTTCCTGGAGAAGACAGAAGCCGAGATTAAGAGCATCATCCTGACAAGAGCTGCTCAA
ACCTGGGCACCTCTAGTTGACGATCAAATAGCTCTCTATAACGCGCAGAAATCTCTGTCG
GGGGATTACAAGCAGCTTGAACTTAAACTACAGCATACCAAGAACCGAGCGGCGATGTTA
GAAGAGATGGCGGAGAAGCTAAGAGCTGAATGCAGAGTTCTGTCTGGGAGTTCAGAAGTC
CTGCGGTTGCAGTCTAGAGCAAGCAGAGTTTCACTCTTTTGTTTCATCCAGTTTGTTCTG
CTGTTTACTGCTGTAGGAACCTTTCTTGCACGGCTCTTGCCCTCTCCTACTGAGTATGTA
CCTACTTGA

Peptide Sequence

PEP ID

Os08t0497900-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24581335:24583695:-1 gene:Os08g0497900 transcript:Os08t0497900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0497900-01)
Sequence

MPPPAADMENGAVGSPAAEVEAGASPGSSPVIKTKGRGLRRWRRIPREQRKEGSAASAAA
GSGSAQLHKRRIPLPGGAPRGKLHEVVLEEEEEESSTASVESRFVPPAKLDPSLGVLLVA
SSGFSVGAGGADSDHSEDRSSGSRSSTAASAPRRHNDLSPFAADRAGRSSRAARARAAEA
QYSLRCSNAVNSRRQSIAGNGIHKVLADHCDHGEETPLMARDYCNVENGSVVVRRLAQGS
VDSDADAAQRSVGNNGDLGSGMKSSADPYAESISLLQRTQEALENEIKMFAVISKESNDN
FDGNDDDWSGLVDLAEPLEGTSQNVKDPESRPEEASYLGRLFLEKTEAEIKSIILTRAAQ
TWAPLVDDQIALYNAQKSLSGDYKQLELKLQHTKNRAAMLEEMAEKLRAECRVLSGSSEV
LRLQSRASRVSLFCFIQFVLLFTAVGTFLARLLPSPTEYVPT

Transcript Sequence

Transcript ID

Os08t0497900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24581335:24583695:-1 gene:Os08g0497900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0497900-01)
Sequence

ACTTCTTTTTCGTATCTTTTCTCCCTTTCGTCGTCGTCGCCGTCCAGTTCGTCATCCTCC
CTCGATCTCCTTTCCACGAGACCAAACGAACTGAAAATTTTCGTTACTACGACCTTGCTC
GATTCCGACAACCCCCGTTCAACGATGATTTCGTCGATTCTTTGATGCCACCTCCGGCGG
CCGATATGGAGAACGGCGCCGTCGGGTCGCCGGCGGCGGAGGTGGAGGCCGGTGCATCTC
CGGGGAGCTCTCCCGTGATAAAGACCAAAGGCCGTGGGCTCCGTCGATGGCGCCGTATCC
CGCGGGAGCAGCGCAAGGAAGGATCAGCCGCCTCCGCCGCCGCCGGCAGCGGCTCGGCGC
AGCTGCACAAGCGGCGGATACCCCTGCCCGGCGGCGCGCCGAGGGGGAAGCTGCACGAGG
TGGTCTTGGAGGAGGAGGAGGAGGAGAGCTCCACCGCCTCCGTCGAGTCCCGCTTCGTCC
CGCCGGCGAAGCTGGATCCGAGCCTCGGCGTGCTGCTCGTCGCCTCCTCGGGATTCTCCG
TCGGCGCGGGCGGCGCCGACTCCGACCACAGCGAGGACCGGAGCAGCGGCAGCAGGTCCT
CCACCGCAGCGAGCGCCCCGCGCCGCCACAACGACCTCTCGCCCTTCGCCGCCGACAGGG
CAGGGCGCTCCTCCCGCGCCGCGCGCGCGCGTGCCGCCGAGGCGCAGTACTCGCTGCGCT
GCTCTAATGCCGTGAACTCCCGGCGGCAATCGATTGCCGGCAATGGAATCCACAAGGTTC
TTGCCGATCACTGTGATCACGGCGAGGAGACGCCATTGATGGCCAGAGATTACTGCAATG
TGGAGAATGGGAGCGTGGTGGTGAGGAGATTGGCACAGGGGAGTGTTGATTCGGATGCTG
ATGCTGCTCAGAGGAGTGTGGGGAACAATGGTGACCTTGGATCAGGGATGAAGTCGAGTG
CTGATCCGTATGCGGAATCGATTTCATTGCTTCAGAGAACGCAAGAAGCGCTTGAGAATG
AGATTAAAATGTTTGCAGTGATCAGTAAAGAGTCAAATGATAATTTTGATGGAAACGACG
ATGATTGGAGTGGTTTAGTCGATCTCGCGGAACCTCTTGAAGGAACAAGTCAAAATGTAA
AGGATCCTGAGTCCAGACCAGAAGAAGCATCTTACCTTGGTCGGCTCTTCCTGGAGAAGA
CAGAAGCCGAGATTAAGAGCATCATCCTGACAAGAGCTGCTCAAACCTGGGCACCTCTAG
TTGACGATCAAATAGCTCTCTATAACGCGCAGAAATCTCTGTCGGGGGATTACAAGCAGC
TTGAACTTAAACTACAGCATACCAAGAACCGAGCGGCGATGTTAGAAGAGATGGCGGAGA
AGCTAAGAGCTGAATGCAGAGTTCTGTCTGGGAGTTCAGAAGTCCTGCGGTTGCAGTCTA
GAGCAAGCAGAGTTTCACTCTTTTGTTTCATCCAGTTTGTTCTGCTGTTTACTGCTGTAG
GAACCTTTCTTGCACGGCTCTTGCCCTCTCCTACTGAGTATGTACCTACTTGAGCTTAGA
GCCATGGAATCACCGATACACGATACATATGCATCAGGAAATAGAACTTGCTTTCATAAA
TTTTCCCTTGTACGGAGTAGTATTTTAGGACATGAAGCTTGTAAATTTTCTTTGTAACTA
TGTTTTCGGAAAAGAAATCTCTGGCTCAGCAGTCCTGGGTT