Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0496800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24533261:24534888:1 gene:Os08g0496800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAFTIN1 description:Similar to RAFTIN1a protein (RAFTIN1a anther protein). (Os08t0496800-01)
Sequence	ATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCGCCGTGCTTTCGCTG GGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGCTGCCGGAATCCCCG TTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCGTCGTCGGCAAAGCG GAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACACTGACTACAGGGGA TCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACTTCGGCGAGCCGGCG CCTTTCGGCTACGACTACAGTGCACAGGGCGAAGGCGGCGGCGGCGGCGCCGCCGCCGCC GCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACAAATACGTCGGCGCG AGGAAGCTCCGCGGCGGCAGCAGCACCGCCGGCGGAGAGAATGATGACGAGCCTTTCGGG TACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGACGACGGCGCGAGGC GTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGGTGCGCGTCGGCGAG AGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCTTCCTGCCGCGCCGC GTCGCGGACTCCATCCCGTTCACGGCGGCCGCGCTGCCGGCCGTCCTCGCGCTGTTCGGC GTCGCGCCGGACACCGCCGAGGCGGCCGGCATGAGGGAGACGCTGCGCACGTGCGAGTGG CCGACCCTCGCCGGCGAGTCCAAGTTCTGCGCCACGTCGCTGGAGGCCCTGGTGGAGGGC GCCATGGCGGCGCTCGGGACACGCGACATCGCCGCGCTGGCGTCGACGCTGCCCCGCGGC GGCGCGCCGCTGCAGGCGTACGCCGTCCGCGCCGTGCTCCCCGTCGAGGGCGCCGGCTTC GTGGCGTGCCACGACCAGGCGTACCCGTACACCGTGTACCGCTGCCACACCACCGGCCCG GCCAGAGCTTACATGGTGGAGATGGAAGGCGACGGCGGCGGCGATGGCGGCGAGGCGGTG ACCGTGGCCACCGTGTGCCACACCAACACGTCGCGGTGGAACCCGGAGCACGTCTCGTTC AAGCTCCTCGGCACCAAGCCCGGCGGCTCGCCGGTGTGCCACCTCATGCCGTACGGGCAC ATCGTCTGGGCCAAGAACGTGAAGAGCTCGACGGCGTAG

Peptide Sequence

PEP ID	Os08t0496800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24533261:24534888:1 gene:Os08g0496800 transcript:Os08t0496800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAFTIN1 description:Similar to RAFTIN1a protein (RAFTIN1a anther protein). (Os08t0496800-01)
Sequence	MARFLLLLVAVAAAAAVLSLGDAAPSTAEVFWRAVLPESPLPDAFLRLLRPDTSFVVGKA EAAGGAARTGFPFDYTDYRGSDSPTTASGLDLAGDFGEPAPFGYDYSAQGEGGGGGAAAA AGEQVLAVDAGFNYDKYVGARKLRGGSSTAGGENDDEPFGYDYKAPSSGSGTAASTTARG VGTGATTTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFG VAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRG GAPLQAYAVRAVLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAV TVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKSSTA

Transcript Sequence

Transcript ID	Os08t0496800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24533261:24534888:1 gene:Os08g0496800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAFTIN1 description:Similar to RAFTIN1a protein (RAFTIN1a anther protein). (Os08t0496800-01)
Sequence	GTCGATCGATCCGTCGCAGTCGTCTCCGGCGAGAAATCGGCTGCGCCCCGTCTCTCTCTC TCTCGAACGCTTCCATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCG CCGTGCTTTCGCTGGGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGC TGCCGGAATCCCCGTTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCG TCGTCGGCAAAGCGGAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACA CTGACTACAGGGGATCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACT TCGGCGAGCCGGCGCCTTTCGGCTACGACTACAGTGCACAGGGCGAAGGCGGCGGCGGCG GCGCCGCCGCCGCCGCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACA AATACGTCGGCGCGAGGAAGCTCCGCGGCGGCAGCAGCACCGCCGGCGGAGAGAATGATG ACGAGCCTTTCGGGTACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGA CGACGGCGCGAGGCGTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGG TGCGCGTCGGCGAGAGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCT TCCTGCCGCGCCGCGTCGCGGACTCCATCCCGTTCACGGCGGCCGCGCTGCCGGCCGTCC TCGCGCTGTTCGGCGTCGCGCCGGACACCGCCGAGGCGGCCGGCATGAGGGAGACGCTGC GCACGTGCGAGTGGCCGACCCTCGCCGGCGAGTCCAAGTTCTGCGCCACGTCGCTGGAGG CCCTGGTGGAGGGCGCCATGGCGGCGCTCGGGACACGCGACATCGCCGCGCTGGCGTCGA CGCTGCCCCGCGGCGGCGCGCCGCTGCAGGCGTACGCCGTCCGCGCCGTGCTCCCCGTCG AGGGCGCCGGCTTCGTGGCGTGCCACGACCAGGCGTACCCGTACACCGTGTACCGCTGCC ACACCACCGGCCCGGCCAGAGCTTACATGGTGGAGATGGAAGGCGACGGCGGCGGCGATG GCGGCGAGGCGGTGACCGTGGCCACCGTGTGCCACACCAACACGTCGCGGTGGAACCCGG AGCACGTCTCGTTCAAGCTCCTCGGCACCAAGCCCGGCGGCTCGCCGGTGTGCCACCTCA TGCCGTACGGGCACATCGTCTGGGCCAAGAACGTGAAGAGCTCGACGGCGTAGGGCTCCA ACTCCGGCGACGGCATTGTGAGCTATGCACGATGCATTATGCATCTTTTTATGTATGTTA TTCGTGTCAGCTGCTGTAATGTCCACATCTAGAGGGATTATACTACCTGTAATAAATAAC AGTTTGTGCC