Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0496600-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:24519872:24521682:-1 gene:Os08g0496600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0496600-00)
Sequence

ATGGAGGAGCAGCCGATCAAGAACGCCGTCCACATCGTGGAGATCCCGGTCACCGGCGAC
GGGGCTTGTCCTGATGGCGGGAACGCGGAGGTCGCCGCGTTTCTTGACAAGGCGGCGGAG
GCGGAGTCTTCCGGGAGCCATCCGCTTGGCGAGATCGCCGGGAGCGCGGGGCACCTGCTG
CTGCTGAAGCTGTGGCAGCGGGAGGAGTCCCGCCTCGGCCGCCGCGCGTGCGCGCTCGAG
GCGCTCATGGACGCGGCGCGCCGCGACGCGTTCTACCTCTGCGCGGCCTTCCTCGCCTTC
CACGGCCTCTCCCTCGCGCTCCTCTTCGCCGCCTCCGTGTCCGCGTCCGCCGTCTCGCCG
CCCGCGGAGCAGCGCGCCGCCTGTTGCAGCAGGTGGTGGGTGCCGTCGTCCCTGTCGCTG
GTCGCGTCCCTCGCGCTCGCGGCGGCCGTGCAGCTCCGGGTCTGCGCCTACTGGCGCGCG
TCGCGGCGGCTGCGCCGGGAGCGCGGCGACGCGCGCGCGCTGGCGCGGTGCGTGCAGGAG
CTCCGGATGAAGGGTGCGGCGTTCGACCTGTCCAAGGAGCCGCAGTACGGGGTGACGAGG
GCCAAGTGCGCCAGCGTCGAGGGCGCCGGTGCGTGGGGCCCGCTCCGGTGGTGCTACCAG
AACATCGTCGCCGCCTGCCTGCTCGCCGTCGCCGCCGCCACCATGTGCTCCGGCAAGTTC
ATCTTGTGCTCGTAG

Peptide Sequence

PEP ID

Os08t0496600-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:24519872:24521682:-1 gene:Os08g0496600 transcript:Os08t0496600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0496600-00)
Sequence

MEEQPIKNAVHIVEIPVTGDGACPDGGNAEVAAFLDKAAEAESSGSHPLGEIAGSAGHLL
LLKLWQREESRLGRRACALEALMDAARRDAFYLCAAFLAFHGLSLALLFAASVSASAVSP
PAEQRAACCSRWWVPSSLSLVASLALAAAVQLRVCAYWRASRRLRRERGDARALARCVQE
LRMKGAAFDLSKEPQYGVTRAKCASVEGAGAWGPLRWCYQNIVAACLLAVAAATMCSGKF
ILCS

Transcript Sequence

Transcript ID

Os08t0496600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24519872:24521682:-1 gene:Os08g0496600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0496600-00)
Sequence

TTCTCCCCTTCCATCTCCTCTTCTCCCCGATCTCGCGGCTTCCAATCTCAGATCAACTCG
AAGCTTTCCAAACGAATCCCCGCTTTCCTTCCAGAACCATCGCTTCTTGACTTCTTGGGA
GCTTCTGGATTCTGATCTATGGAGGAGCAGCCGATCAAGAACGCCGTCCACATCGTGGAG
ATCCCGGTCACCGGCGACGGGGCTTGTCCTGATGGCGGGAACGCGGAGGTCGCCGCGTTT
CTTGACAAGGCGGCGGAGGCGGAGTCTTCCGGGAGCCATCCGCTTGGCGAGATCGCCGGG
AGCGCGGGGCACCTGCTGCTGCTGAAGCTGTGGCAGCGGGAGGAGTCCCGCCTCGGCCGC
CGCGCGTGCGCGCTCGAGGCGCTCATGGACGCGGCGCGCCGCGACGCGTTCTACCTCTGC
GCGGCCTTCCTCGCCTTCCACGGCCTCTCCCTCGCGCTCCTCTTCGCCGCCTCCGTGTCC
GCGTCCGCCGTCTCGCCGCCCGCGGAGCAGCGCGCCGCCTGTTGCAGCAGGTGGTGGGTG
CCGTCGTCCCTGTCGCTGGTCGCGTCCCTCGCGCTCGCGGCGGCCGTGCAGCTCCGGGTC
TGCGCCTACTGGCGCGCGTCGCGGCGGCTGCGCCGGGAGCGCGGCGACGCGCGCGCGCTG
GCGCGGTGCGTGCAGGAGCTCCGGATGAAGGGTGCGGCGTTCGACCTGTCCAAGGAGCCG
CAGTACGGGGTGACGAGGGCCAAGTGCGCCAGCGTCGAGGGCGCCGGTGCGTGGGGCCCG
CTCCGGTGGTGCTACCAGAACATCGTCGCCGCCTGCCTGCTCGCCGTCGCCGCCGCCACC
ATGTGCTCCGGCAAGTTCATCTTGTGCTCGTAGGCCGGAGGCTAAGCCAGTTTATTGTGT
TGATTTGGAGGATACAGAAGGGGATCGCAAATGTTTGTCGCTGCATGCTCGCATAGGACG
GACTGACCACTGCTTGTGCTCCAATGGTTACGAGACAACAACATTTTTTCTTAGCCCTGA
GATGTCCAAAGGGCATATTCTTTGTATTGATTTAGTTCCTGAAACTCAAATACTTTGTTG
TTCTGGTTTCCAGTCAGTTTTGAC