Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0495800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24475222:24479499:1 gene:Os08g0495800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alkaline alpha-galactosidase description:Raffinose synthase family protein. (Os08t0495800-01);Similar to alkaline alpha galactosidase 3. (Os08t0495800-02)
Sequence	ATGACGGTGGGAGCCGGGGTGGCGGTGCAGGACGGCGGCCTGGTGGCGCTGGGCGCCACG GTGCTGACGGAGGTGCGCGACAATGTGCTCCTGACGCCGGCCGCCGGCGCCGGCATGACG AGCGGCACGTTCGTCGGAGTCCGCTCCGCCACCGCCGGCAGCCGCAGCGTCTTCCCCGTC GGGAAGCTCAGGGGATTGCGGTTCATCTGCACGTTCCGGTTTAAGATGTGGTGGATGACG CAGAGGATGGGGACGTCAGGCCGCGACATCCCCTTCGAGACGCAGTTCCTCCTCGTCGAG GCCGCCGACGCCGACGGATCACACCTCGCCGGCGACGGCGCCGCCGCGGTGTACACCGTG TTCCTCCCGATCTTGGAGGGACCGTTCCGAGCTGTGCTTCAGGGGAACTCTGATGATGAG CTCGAGATTTGCCTCGAGAGTGGTGACCCAGCTGTGGAATCATTCGAAGGCACGCATCTG GTTTTCGTCGGTGCCGGATCGGATCCATTCGAAGTCATCACAAATTCTGTCAAGGCTGTT GAGAGGCACTTGCAGACGTTTACTCACAGGGAAAAGAAGAAGATGCCAGACATGCTAAAC TGGTTTGGTTGGTGCACATGGGATGCGTTTTATACTGATGTTACTTCAGAAGGAGTAATG GAAGGATTACAGAGTCTAGGAAAAGGTGGAACTGGCCCAAAATTTGTGATAATTGATGAT GGATGGCAATCAGTTAGTATGGATCCTGCAGGAATTGCATCATTAGCTGATAACTCAGCC AACTTTGCAAACAGGTTGACTCACATAAAGGAGAACCACAAATTTCAGCTAAACGGGAGG AAAGGTCACAGGGAAGAGAATCCGGCAAATGGCCTTGCACACATTGTCAATGAAATTAAG GGCAAACATCAGCTGAAGTATGTTTATGTGTGGCACGCGATCACCGGATACTGGGGTGGA GTAAGGCCTGGTGCTGATGGAATGGAGCACTACGAATCGAAGATGCAGTACCCGGTCTCA TCACCGGGAGTTCAGAAGAACGAGCCATGTGATGCTCTGAACAGCATAACCACCAACGGC CTTGGCCTTGTGAACCCTGACAGAGTGTTCAGCTTCTACAACGAGCTACACGCCTACCTT GCATCTGCTGGGATCGATGGAGTGAAAGTAGATGTGCAGAACATTCTTGAGACACTGGGT GCTGGCCATGGTGGAAGAGTGCTTCTGGCAAGGAAGTATCACCAGGCTCTAGAAGCTTCC ATCGCCCGGAACTTCCGCGACAACGGCATCATATGCTGCATGAGCCACAACACGGATAAC TTGTACAGTTCTAAGAGGAGTGCTGTTGTGAGAGCTTCTGATGATTTCTGGCCTAGAGAC CCTGCTTCCCATACTATACATATTGCATCTGTTGCATATAATACTGTATTTCTTGGAGAA TTCATGCAACCAGATTGGGACATGTTCCATAGTGTTCACCCAATGGCTGAATACCATGCT GCAGCAAGAGCAGTCGGTGGCTGTGCCATATATGTCAGTGACAAGCCTGGGAACCATGAC TTCAATTTGCTGAAGAAGCTGGTTCTTCCTGACGGATCGATCCTGAGAGCCAAACTCCCC GGCAGGCCAACCAGAGACTGTCTGTTTTCAGACCCTGCAAGGGATGGCAAGAGTATCCTG AAGATATGGAATCTGAACGAGCACTCCGGTGTGATTGGCGCCTTCAATTGCCAGGGTGCT GGATGGTGCAGAGTAGGGAAGAAGAACCTCGTCCACGACGAGCAGCCGGCGACGGTCACC GGTGTCATCCGTGCACAGGACGTGCATCACCTCGCAACCGTTGCTGCCGATGGCTGGAAC GGCGACGTGATCGTCTACTCGCACATCGGAGGGGAGGTGACCTGCCTGCCCAAGAACGCG TCGTTGCCGGTGACACTGAAGACGCGAGAGTACGAGGTCTTCACCGTCGTACCACTGAAG AAGCTCGACAATGGCGTCTCCTTCGCCGCGGTCGGGCTGATCGGGATGTTCAACTCCGGC GGGGCGGTGACGGCGGTGAGGTACGTGGAGGACGCCGGCGTTGAGGTCAGGGTGCCGGAG CAAGAACTCTACTCCTGGACCATCTCGATCGAGTACTGA

Peptide Sequence

PEP ID	Os08t0495800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24475222:24479499:1 gene:Os08g0495800 transcript:Os08t0495800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alkaline alpha-galactosidase description:Raffinose synthase family protein. (Os08t0495800-01);Similar to alkaline alpha galactosidase 3. (Os08t0495800-02)
Sequence	MTVGAGVAVQDGGLVALGATVLTEVRDNVLLTPAAGAGMTSGTFVGVRSATAGSRSVFPV GKLRGLRFICTFRFKMWWMTQRMGTSGRDIPFETQFLLVEAADADGSHLAGDGAAAVYTV FLPILEGPFRAVLQGNSDDELEICLESGDPAVESFEGTHLVFVGAGSDPFEVITNSVKAV ERHLQTFTHREKKKMPDMLNWFGWCTWDAFYTDVTSEGVMEGLQSLGKGGTGPKFVIIDD GWQSVSMDPAGIASLADNSANFANRLTHIKENHKFQLNGRKGHREENPANGLAHIVNEIK GKHQLKYVYVWHAITGYWGGVRPGADGMEHYESKMQYPVSSPGVQKNEPCDALNSITTNG LGLVNPDRVFSFYNELHAYLASAGIDGVKVDVQNILETLGAGHGGRVLLARKYHQALEAS IARNFRDNGIICCMSHNTDNLYSSKRSAVVRASDDFWPRDPASHTIHIASVAYNTVFLGE FMQPDWDMFHSVHPMAEYHAAARAVGGCAIYVSDKPGNHDFNLLKKLVLPDGSILRAKLP GRPTRDCLFSDPARDGKSILKIWNLNEHSGVIGAFNCQGAGWCRVGKKNLVHDEQPATVT GVIRAQDVHHLATVAADGWNGDVIVYSHIGGEVTCLPKNASLPVTLKTREYEVFTVVPLK KLDNGVSFAAVGLIGMFNSGGAVTAVRYVEDAGVEVRVPEQELYSWTISIEY

Transcript Sequence

Transcript ID	Os08t0495800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24475222:24479499:1 gene:Os08g0495800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alkaline alpha-galactosidase description:Raffinose synthase family protein. (Os08t0495800-01);Similar to alkaline alpha galactosidase 3. (Os08t0495800-02)
Sequence	GTCTCCGGCGAGCGAGCACGAGGCACTCACCGCCGGCGGCGACCGAAGCAAATCCGGCAT TCGCCTGAGCCGGCGAGATTCGGAGTCGGAGAGGAGGAGGAAGAAGATGACGGTGGGAGC CGGGGTGGCGGTGCAGGACGGCGGCCTGGTGGCGCTGGGCGCCACGGTGCTGACGGAGGT GCGCGACAATGTGCTCCTGACGCCGGCCGCCGGCGCCGGCATGACGAGCGGCACGTTCGT CGGAGTCCGCTCCGCCACCGCCGGCAGCCGCAGCGTCTTCCCCGTCGGGAAGCTCAGGGG ATTGCGGTTCATCTGCACGTTCCGGTTTAAGATGTGGTGGATGACGCAGAGGATGGGGAC GTCAGGCCGCGACATCCCCTTCGAGACGCAGTTCCTCCTCGTCGAGGCCGCCGACGCCGA CGGATCACACCTCGCCGGCGACGGCGCCGCCGCGGTGTACACCGTGTTCCTCCCGATCTT GGAGGGACCGTTCCGAGCTGTGCTTCAGGGGAACTCTGATGATGAGCTCGAGATTTGCCT CGAGAGTGGTGACCCAGCTGTGGAATCATTCGAAGGCACGCATCTGGTTTTCGTCGGTGC CGGATCGGATCCATTCGAAGTCATCACAAATTCTGTCAAGGCTGTTGAGAGGCACTTGCA GACGTTTACTCACAGGGAAAAGAAGAAGATGCCAGACATGCTAAACTGGTTTGGTTGGTG CACATGGGATGCGTTTTATACTGATGTTACTTCAGAAGGAGTAATGGAAGGATTACAGAG TCTAGGAAAAGGTGGAACTGGCCCAAAATTTGTGATAATTGATGATGGATGGCAATCAGT TAGTATGGATCCTGCAGGAATTGCATCATTAGCTGATAACTCAGCCAACTTTGCAAACAG GTTGACTCACATAAAGGAGAACCACAAATTTCAGCTAAACGGGAGGAAAGGTCACAGGGA AGAGAATCCGGCAAATGGCCTTGCACACATTGTCAATGAAATTAAGGGCAAACATCAGCT GAAGTATGTTTATGTGTGGCACGCGATCACCGGATACTGGGGTGGAGTAAGGCCTGGTGC TGATGGAATGGAGCACTACGAATCGAAGATGCAGTACCCGGTCTCATCACCGGGAGTTCA GAAGAACGAGCCATGTGATGCTCTGAACAGCATAACCACCAACGGCCTTGGCCTTGTGAA CCCTGACAGAGTGTTCAGCTTCTACAACGAGCTACACGCCTACCTTGCATCTGCTGGGAT CGATGGAGTGAAAGTAGATGTGCAGAACATTCTTGAGACACTGGGTGCTGGCCATGGTGG AAGAGTGCTTCTGGCAAGGAAGTATCACCAGGCTCTAGAAGCTTCCATCGCCCGGAACTT CCGCGACAACGGCATCATATGCTGCATGAGCCACAACACGGATAACTTGTACAGTTCTAA GAGGAGTGCTGTTGTGAGAGCTTCTGATGATTTCTGGCCTAGAGACCCTGCTTCCCATAC TATACATATTGCATCTGTTGCATATAATACTGTATTTCTTGGAGAATTCATGCAACCAGA TTGGGACATGTTCCATAGTGTTCACCCAATGGCTGAATACCATGCTGCAGCAAGAGCAGT CGGTGGCTGTGCCATATATGTCAGTGACAAGCCTGGGAACCATGACTTCAATTTGCTGAA GAAGCTGGTTCTTCCTGACGGATCGATCCTGAGAGCCAAACTCCCCGGCAGGCCAACCAG AGACTGTCTGTTTTCAGACCCTGCAAGGGATGGCAAGAGTATCCTGAAGATATGGAATCT GAACGAGCACTCCGGTGTGATTGGCGCCTTCAATTGCCAGGGTGCTGGATGGTGCAGAGT AGGGAAGAAGAACCTCGTCCACGACGAGCAGCCGGCGACGGTCACCGGTGTCATCCGTGC ACAGGACGTGCATCACCTCGCAACCGTTGCTGCCGATGGCTGGAACGGCGACGTGATCGT CTACTCGCACATCGGAGGGGAGGTGACCTGCCTGCCCAAGAACGCGTCGTTGCCGGTGAC ACTGAAGACGCGAGAGTACGAGGTCTTCACCGTCGTACCACTGAAGAAGCTCGACAATGG CGTCTCCTTCGCCGCGGTCGGGCTGATCGGGATGTTCAACTCCGGCGGGGCGGTGACGGC GGTGAGGTACGTGGAGGACGCCGGCGTTGAGGTCAGGGTGCCGGAGCAAGAACTCTACTC CTGGACCATCTCGATCGAGTACTGACGTAGTGACGTTGCTTACCATGAAGTTTCTCAATG TTTTTCATGATGAAAAATGGAGTGGATGAGATTTCTGAAAATATATTCAGGTTCTTGCTG AATCCCGGGTTGGGAATTCAGCATGGTGCTGAACATTGTAAGCTAAGGTTGAGATGTTCG CAACATTCTTGCTGCATATGTTGCGGCTAATTCGTGTTATTCCGAGCATACACATACAGT ATGCAAAAATCCAAAGGGAAAAAAAAATGGTTTCTGTC