Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0495500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24464442:24467893:1 gene:Os08g0495500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os08t0495500-01)
Sequence

ATGAGCGACGGGGCGCGCGTGGAGGCGGCGCCGCGGCTCGCGCAATGGCGCGTCGACGTG
CTCCCCTGCTACACCTACCGCAAGTCCGAGCCCTTCCGCATCGGCCTCTGGAACTGGTAC
CTATCTGTGGAGAGAAATAACAAGCAAACTTGTGTTAAGGTCTTTGCGGAGTTATCGAAT
TCTGCCAAGAATACAACCCCAGCCCCTATTGCTTCCTTCATCACAAAACTTCTCATATCT
TTTCCTCCAAATCAGAAGACCATAGTTCATCCAGGAATTTTTGACAAGCCGCTGAAACAC
GAAGGTTTTGTGTGGGCAATTGATAGTACTGTTACAGGAAGATTTGTGATTGAGATAGAG
TTTCTTGACCTGAAAATTGCAGATCCATCTGGTGGTGAACCAGCCTCAATTTGGGCTTCC
CACCAAATCAAGAAATCTTCAGACAACACTGCACTGTCATCCTTGGCGAGAATGCTGCAA
GAAGGCATCCTCACCGACATCACAATCAACGCTACCGACGGCAGCATTATGGCCCACCGT
GCAATCCTGGCCAGCCGTTCCCCTGTCTTCAGGAGCATGTTCTCGCACGACCTCAAGGAG
AAAGAACTCTCAACAGTTGACATCTCTGACATGTCCCTTGAAGCATGCCAGGCCTTCCTC
AACTACATTTATGGTGACCTACGCAGCGAAGAGTTCCTCACCCACAGGTTAGCTCTTCTC
AGAGCTGCCGATAAGTATGACATCTCTGATCTTAAGGAGGCATGCCATGAGAGCCTGTTA
GAGGACATCGACACGAAGAATGTGCTCGAGAGGCTTCAGATGGCGCACTTGTACCGATTG
CAAAAGCTCAAGGATGGCTGCTTGAGATTTCTGGTAGATTTCAGAAAGGTGTATGAAATG
CATGACGATTTCAAGGTGTTCCTCCAGACAGCAGACAGGGATATCATAGCTGAAATCTTC
CAAGGTATTCTTACAACATGGAGTGGGCGATAA

Peptide Sequence

PEP ID

Os08t0495500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24464442:24467893:1 gene:Os08g0495500 transcript:Os08t0495500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os08t0495500-01)
Sequence

MSDGARVEAAPRLAQWRVDVLPCYTYRKSEPFRIGLWNWYLSVERNNKQTCVKVFAELSN
SAKNTTPAPIASFITKLLISFPPNQKTIVHPGIFDKPLKHEGFVWAIDSTVTGRFVIEIE
FLDLKIADPSGGEPASIWASHQIKKSSDNTALSSLARMLQEGILTDITINATDGSIMAHR
AILASRSPVFRSMFSHDLKEKELSTVDISDMSLEACQAFLNYIYGDLRSEEFLTHRLALL
RAADKYDISDLKEACHESLLEDIDTKNVLERLQMAHLYRLQKLKDGCLRFLVDFRKVYEM
HDDFKVFLQTADRDIIAEIFQGILTTWSGR

Transcript Sequence

Transcript ID

Os08t0495500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24464442:24467893:1 gene:Os08g0495500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os08t0495500-01)
Sequence

AACTTGGGCGATCTTGGTCGCCGTCGTCGTCGTCGTCGTCGTCGTCGTGGAGGCGGTTCT
TGGCGGAGGAGGAGTCACACAGGAGTGGGTGAGAGAGGGGGTACATGAGGAGGTGGGGTG
AGGGGGGAGGGAGGAGGAAAGCTGGGGAAGGAGTTGGGCTTGCTGGGGTGCGTCAATGAG
GTGGTGGCGGCGGTGGCGGCGTCGTGGGGCGCGATGAGCGACGGGGCGCGCGTGGAGGCG
GCGCCGCGGCTCGCGCAATGGCGCGTCGACGTGCTCCCCTGCTACACCTACCGCAAGTCC
GAGCCCTTCCGCATCGGCCTCTGGAACTGGTACCTATCTGTGGAGAGAAATAACAAGCAA
ACTTGTGTTAAGGTCTTTGCGGAGTTATCGAATTCTGCCAAGAATACAACCCCAGCCCCT
ATTGCTTCCTTCATCACAAAACTTCTCATATCTTTTCCTCCAAATCAGAAGACCATAGTT
CATCCAGGAATTTTTGACAAGCCGCTGAAACACGAAGGTTTTGTGTGGGCAATTGATAGT
ACTGTTACAGGAAGATTTGTGATTGAGATAGAGTTTCTTGACCTGAAAATTGCAGATCCA
TCTGGTGGTGAACCAGCCTCAATTTGGGCTTCCCACCAAATCAAGAAATCTTCAGACAAC
ACTGCACTGTCATCCTTGGCGAGAATGCTGCAAGAAGGCATCCTCACCGACATCACAATC
AACGCTACCGACGGCAGCATTATGGCCCACCGTGCAATCCTGGCCAGCCGTTCCCCTGTC
TTCAGGAGCATGTTCTCGCACGACCTCAAGGAGAAAGAACTCTCAACAGTTGACATCTCT
GACATGTCCCTTGAAGCATGCCAGGCCTTCCTCAACTACATTTATGGTGACCTACGCAGC
GAAGAGTTCCTCACCCACAGGTTAGCTCTTCTCAGAGCTGCCGATAAGTATGACATCTCT
GATCTTAAGGAGGCATGCCATGAGAGCCTGTTAGAGGACATCGACACGAAGAATGTGCTC
GAGAGGCTTCAGATGGCGCACTTGTACCGATTGCAAAAGCTCAAGGATGGCTGCTTGAGA
TTTCTGGTAGATTTCAGAAAGGTGTATGAAATGCATGACGATTTCAAGGTGTTCCTCCAG
ACAGCAGACAGGGATATCATAGCTGAAATCTTCCAAGGTATTCTTACAACATGGAGTGGG
CGATAAGCATGTTTATACGGTATATCTGGTTTGGTTCAGAAGCATTCTTTCCAGAATTGT
TGCTGGTAAAGCATGTAAATATATAGTACTACATTTTACATGCCATCAAATTGGCTCTAA
ATTTAATGTATATATACCTTGATTGGATTTTGTACATATCATATATGTAAATCTAATTCT
TGTATCCGACTCCACGTATTGTAACAATTCTGCTGATCTGGAAGAAAATATTACTTCAGA
TTTCCATTTTGTAATGC