Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0494300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24397939:24401324:-1 gene:Os08g0494300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine domain containing protein. (Os08t0494300-01)
Sequence	ATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAGCCGCACTGCTGCAACCAC AGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCGGTTCGCCAAGTTCGGCGATGAT TACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGCTGGTCTTGAGTCATCAAAT CTGATTGTTGGGATTGATTTCACCAAGTCCAATGAATGGACAGGCAGAGTTTCCTTCAAC AACCAGAGCCTGCATTCTCTGGGCCATATCTCAAACCCATATGAGCAAGCCATATCTATC ATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCATGCTATGGATTTGGT GATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACAACAAACCATGTGAT GGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAACTACGTTTGGCTGGC CCCACTTCATTTGCACCGATGATTGAGACAGCTATTGGAATTGTGGATAGTAGTGGTGGC CAGTATCATGTCCTACTTATAATTGCAGATGGACAGGTTACACGCAGTGTTGACACAGGT AATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGATGCCATTGTGAAAGCCAGTGAC TACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGGGCCATGGGATATGATGAGGCAA TTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTGTGAACTTCACAGAG ATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTCTTTCAGCATTG ATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGA GGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGG TGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCA GCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCA AAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAG GTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGA

Peptide Sequence

PEP ID	Os08t0494300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24397939:24401324:-1 gene:Os08g0494300 transcript:Os08t0494300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine domain containing protein. (Os08t0494300-01)
Sequence	MGAFCSKQNPSGQQPHCCNHSSSSNAAPKGNNRFAKFGDDYHTLEQVTDALAHAGLESSN LIVGIDFTKSNEWTGRVSFNNQSLHSLGHISNPYEQAISIIGQTLSRFDEDNLIPCYGFG DATTHDQKVFSFYPDNKPCDGFEQALDRYREIVPQLRLAGPTSFAPMIETAIGIVDSSGG QYHVLLIIADGQVTRSVDTGNGQLSPQERETIDAIVKASDYPLSIVLVGVGDGPWDMMRQ FDDNIPSRAFDNFQFVNFTEIMSRPVPASKKEAEFALSALMEIPEQFKAAINLQLLGKRR GFPHRTVLPPPVRDFQQYYGCSTVKETQSTSYGSLQKKTSAPKQDSDIGDQTCPICWLEA KNLAFGCGHQTCSDCGKDLKVCPICQREISTRIRLY

Transcript Sequence

Transcript ID	Os08t0494300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24397939:24401324:-1 gene:Os08g0494300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copine domain containing protein. (Os08t0494300-01)
Sequence	AGTTTTCAGTTCGCTCGATTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGG ATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGA GATTGATTAAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCA GCAGCCGCACTGCTGCAACCACAGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCG GTTCGCCAAGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACA CGCTGGTCTTGAGTCATCAAATCTGATTGTTGGGATTGATTTCACCAAGTCCAATGAATG GACAGGCAGAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATATCTCAAACCC ATATGAGCAAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCT GATACCATGCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTA TCCTGACAACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGT TCCACAACTACGTTTGGCTGGCCCCACTTCATTTGCACCGATGATTGAGACAGCTATTGG AATTGTGGATAGTAGTGGTGGCCAGTATCATGTCCTACTTATAATTGCAGATGGACAGGT TACACGCAGTGTTGACACAGGTAATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGA TGCCATTGTGAAAGCCAGTGACTACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGG GCCATGGGATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTT CCAGTTTGTGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGC AGAATTTGCTCTTTCAGCATTGATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCT CCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAG GGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGG GTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTG TCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTC GGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAAT TAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACAC TTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTA TCAGTGTTATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCATTTG TGAAATGAATGTTCCTATCATTTTGG