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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0492100-03
CDS Infomation

cds chromosome:IRGSP-1.0:8:24315383:24318705:-1 gene:Os08g0492100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-01);Hypothetical conserved gene. (Os08t0492100-02);Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-03)
Sequence

ATGGGGAAGGCGGAGGCGAGGTCCAGGGAGCACGGCGGGGGCGGAGGAGGAGGCAGCGGC
AGCGCGGGGAAGATCTTCGTCGGTGGACTGCCCCGTGACACCACGGAAGCGGATTTTGTG
AAGCATTTTGGCCAGTATGGAGAAATAGTTGATTCAGTGATAATGAGGGATAAGCACACA
TCTCAGCCAAGGGGCTTTGGCTTTATTACATATTCTAACCCTGCCGTTGTGGATAGAGTG
ATGGATGATATCCATGAATTCAATGGAAAGCAAGTTGAAATCAAGAGAACCATTCCAAAA
GATTCTGTGCAATCAAAGGATTTCAAAACTAAAAAGATATTTGTTGGTGGGCTTCCTCAA
GCACTGACAGAAGATGATTTCAAGCATTTCTTCCAGAAATATGGCCCTGTGGTGGACCAT
CAGATTATGCGTGATCATCAAACCAAGCGTTCACGAGGCTTTGGATTTATAGTTTTTAGT
TCTGATCAGGTTGTAGATGATTTATTAGCAAATGGAAATATGATTGATCTTGCTGGTGCA
AAGGTGGAGATCAAGAAAGCAGAACCAAAGAAATCCTCAAATCCACCACCATCATCACAT
GGTAGTGCCTCTAGATCAGCATATGGTAGGGATTCTAGGGGTCATTCTTCTGGCAATGAC
TATGGTGGACTGGCCAATGCTTATAGCAACTACAACAGTGGTGGATTTGGGCCTTATAGG
AACCATGGAGTTTATGGTGGTGGTAGTCTCAGTGGTTATGGTGGGATAGGTGAATATGGT
GTTCAGTATGGCCGTTACTATCCAGGATTAGGAGGATCTGGAAGCATGCCTTCTTTTGGT
TATGCTAGTCGTGTTGGGCCGTATGGAGGAGGTTTTGATGGACCTTACGCTGGTGGGAAC
TTAAGTGGATACAGGCGTGGTGGTGATGAGAGCTTTGGTGGCCTCAGTAGTTCTAGCTTT
GGTGGCGCTATGTATGGCGGCGCAGCATATGATCCTGCACTAGGTGGTTATGCATCTGGT
AGCACACCTGAAAGAAGCAGGGGAAATTTGGCTGGTGGTTCAGGCCGGTACAATCCATAT
GGACGATAG

Peptide Sequence

PEP ID

Os08t0492100-03
PEP Infomation

pep chromosome:IRGSP-1.0:8:24315383:24318705:-1 gene:Os08g0492100 transcript:Os08t0492100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-01);Hypothetical conserved gene. (Os08t0492100-02);Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-03)
Sequence

MGKAEARSREHGGGGGGGSGSAGKIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHT
SQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIFVGGLPQ
ALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGA
KVEIKKAEPKKSSNPPPSSHGSASRSAYGRDSRGHSSGNDYGGLANAYSNYNSGGFGPYR
NHGVYGGGSLSGYGGIGEYGVQYGRYYPGLGGSGSMPSFGYASRVGPYGGGFDGPYAGGN
LSGYRRGGDESFGGLSSSSFGGAMYGGAAYDPALGGYASGSTPERSRGNLAGGSGRYNPY
GR

Transcript Sequence

Transcript ID

Os08t0492100-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24315383:24318705:-1 gene:Os08g0492100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-01);Hypothetical conserved gene. (Os08t0492100-02);Paraneoplastic encephalomyelitis antigen family protein. (Os08t0492100-03)
Sequence

AGCTAGCGCGCGGCGTCCATGGGGAAGGCGGAGGCGAGGTCCAGGGAGCACGGCGGGGGC
GGAGGAGGAGGCAGCGGCAGCGCGGGGAAGATCTTCGTCGGTGGACTGCCCCGTGACACC
ACGGAAGCGGATTTTGTGAAGCATTTTGGCCAGTATGGAGAAATAGTTGATTCAGTGATA
ATGAGGGATAAGCACACATCTCAGCCAAGGGGCTTTGGCTTTATTACATATTCTAACCCT
GCCGTTGTGGATAGAGTGATGGATGATATCCATGAATTCAATGGAAAGCAAGTTGAAATC
AAGAGAACCATTCCAAAAGATTCTGTGCAATCAAAGGATTTCAAAACTAAAAAGATATTT
GTTGGTGGGCTTCCTCAAGCACTGACAGAAGATGATTTCAAGCATTTCTTCCAGAAATAT
GGCCCTGTGGTGGACCATCAGATTATGCGTGATCATCAAACCAAGCGTTCACGAGGCTTT
GGATTTATAGTTTTTAGTTCTGATCAGGTTGTAGATGATTTATTAGCAAATGGAAATATG
ATTGATCTTGCTGGTGCAAAGGTGGAGATCAAGAAAGCAGAACCAAAGAAATCCTCAAAT
CCACCACCATCATCACATGGTAGTGCCTCTAGATCAGCATATGGTAGGGATTCTAGGGGT
CATTCTTCTGGCAATGACTATGGTGGACTGGCCAATGCTTATAGCAACTACAACAGTGGT
GGATTTGGGCCTTATAGGAACCATGGAGTTTATGGTGGTGGTAGTCTCAGTGGTTATGGT
GGGATAGGTGAATATGGTGTTCAGTATGGCCGTTACTATCCAGGATTAGGAGGATCTGGA
AGCATGCCTTCTTTTGGTTATGCTAGTCGTGTTGGGCCGTATGGAGGAGGTTTTGATGGA
CCTTACGCTGGTGGGAACTTAAGTGGATACAGGCGTGGTGGTGATGAGAGCTTTGGTGGC
CTCAGTAGTTCTAGCTTTGGTGGCGCTATGTATGGCGGCGCAGCATATGATCCTGCACTA
GGTGGTTATGCATCTGGTAGCACACCTGAAAGAAGCAGGGGAAATTTGGCTGGTGGTTCA
GGCCGGTACAATCCATATGGACGATAGAGATGCCCTTGAAGGATTCGACCCATGATAATA
TTCTCAGCAATCTTACTTCCTCATTGCCTTCTTTTAGCTTCTTATATGGTGGGCATCTTA
GCAATGCTAGTACCCTTATTAGATTGAGCGTGTGCACAAGTAATTTATTCTGTACATGTT
TGCTAGTTCTCCTGAGCTTAAAGCTTTAATCGGTACCATGTAGTGATCAGACTAGATGTT
GTAATGATGGTTTTGTTTGGGATGAACGGAATTCTGGTATTGTTAGTTTTATATCATCTA
CGAAGTAAGTTTAAGCTGC