Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0491400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24282860:24284377:1 gene:Os08g0491400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Interferon-related developmental regulator domain containing protein. (Os08t0491400-01)
Sequence	ATGGTACTGGGGAAATCCATTCGCCGCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATA CTGGACGGCGATGACACCAGCAGCGCTAGCGGTGGCGGCATGAGCATCTACTACCAGAAG ATTAATCAGAGAGTCGCCGTTCTCGAGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCG TCCACGCGGGAGGCGGCGCTGGCGTCGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCC CACTTCATCGGGTGGCACCTACGCGGTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAG AAGGGAGCCGCCGCCAAGGAGGCCCGCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTC ACGCTCGGCCCGGGCTCCAAGAGGAGGATCTTGCCGGCGGAGACGTACAACCCGCTCGAA CCCGGCCCTGGCTCGAAGAAGATCATGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTC GAGGTGTCAACCGACGCGCCCCTGGTGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCG TTCGTCGACGTCGCCGCGGAGAACATGGACGACACGGAGGCGTGCATGAAGGCGCTGTGG GGGCTGATCCGCCCAAGCACGGGGCCCAAGGTCGCCGGCGTGGCGAGGAAGACGAGCCCT CATGTCCTGGCCGCCGCCGTGTCGGCGTGGACGCTCGTGCTGACCACCACCGACGGCTGG AAGAAGAAGAAGGCGGCGGCGTCCTCTCCCGCCGCGTGGCGCGACACGGCGGCGCACCTC GCCTCGCTCCTCCACTCCGACAGCCGCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCC GTCACCATCGAGATGAAGCTCCTGACCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTG GCGGCCAGAGCGTCCGAGCTCGCCAACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAAC TTCGTCGAGCAGAAGGAGCTCTTCAATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCA CCGGCGAGCTCGGTGCGCGCGTCGTCGTCCCACCACGGGCGGCTGACGGCGTCGACATGG ACGGACATTGTCCGGCTCAACTTCCTCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCAC CTCCAGGGGAAGGTGCTGATGGGGGAGGAGGCGCCGCTGATAGGGCAGGTGTTCGTCGTC AAGGAGGACGACATGGCCATGGATCACAAGAAGAAGGTGGAGAAGCAGAGGACGCTCAAC AGGGAGCGCTCCATTGTCTCTGACCTCAAGCATGGATCTTCTCATGTATGA

Peptide Sequence

PEP ID	Os08t0491400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24282860:24284377:1 gene:Os08g0491400 transcript:Os08t0491400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Interferon-related developmental regulator domain containing protein. (Os08t0491400-01)
Sequence	MVLGKSIRRSNGHASSSSSILDGDDTSSASGGGMSIYYQKINQRVAVLEKVAVSVHESRA STREAALASLVGALEGFVPAHFIGWHLRGEIVRGCCASIKKGAAAKEARLALRAVALLAV TLGPGSKRRILPAETYNPLEPGPGSKKIMAETFPLVSRILEVSTDAPLVIAALESLAVVA FVDVAAENMDDTEACMKALWGLIRPSTGPKVAGVARKTSPHVLAAAVSAWTLVLTTTDGW KKKKAAASSPAAWRDTAAHLASLLHSDSRAVRMAAGEALAVTIEMKLLTRDSNGALISGV AARASELANEAAGAGVGKANFVEQKELFNSITTFLAGGKAPASSVRASSSHHGRLTASTW TDIVRLNFLRRFLGGGFLPHLQGKVLMGEEAPLIGQVFVVKEDDMAMDHKKKVEKQRTLN RERSIVSDLKHGSSHV

Transcript Sequence

Transcript ID	Os08t0491400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24282860:24284377:1 gene:Os08g0491400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Interferon-related developmental regulator domain containing protein. (Os08t0491400-01)
Sequence	ACTGCGCCTCCCAAAGTGTTCGATCGATTGCCTCAACCACCCGCTCACTGCGCAGGCGAC CTGTTCGATCAATTGCCTAGACCAGTCAACCACCGCTCACCATGGTACTGGGGAAATCCA TTCGCCGCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATACTGGACGGCGATGACACCA GCAGCGCTAGCGGTGGCGGCATGAGCATCTACTACCAGAAGATTAATCAGAGAGTCGCCG TTCTCGAGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCGTCCACGCGGGAGGCGGCGC TGGCGTCGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCCCACTTCATCGGGTGGCACC TACGCGGTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAGAAGGGAGCCGCCGCCAAGG AGGCCCGCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCGGGCTCCA AGAGGAGGATCTTGCCGGCGGAGACGTACAACCCGCTCGAACCCGGCCCTGGCTCGAAGA AGATCATGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTCGAGGTGTCAACCGACGCGC CCCTGGTGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGG AGAACATGGACGACACGGAGGCGTGCATGAAGGCGCTGTGGGGGCTGATCCGCCCAAGCA CGGGGCCCAAGGTCGCCGGCGTGGCGAGGAAGACGAGCCCTCATGTCCTGGCCGCCGCCG TGTCGGCGTGGACGCTCGTGCTGACCACCACCGACGGCTGGAAGAAGAAGAAGGCGGCGG CGTCCTCTCCCGCCGCGTGGCGCGACACGGCGGCGCACCTCGCCTCGCTCCTCCACTCCG ACAGCCGCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCCGTCACCATCGAGATGAAGC TCCTGACCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTGGCGGCCAGAGCGTCCGAGC TCGCCAACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAACTTCGTCGAGCAGAAGGAGC TCTTCAATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCACCGGCGAGCTCGGTGCGCG CGTCGTCGTCCCACCACGGGCGGCTGACGGCGTCGACATGGACGGACATTGTCCGGCTCA ACTTCCTCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCACCTCCAGGGGAAGGTGCTGA TGGGGGAGGAGGCGCCGCTGATAGGGCAGGTGTTCGTCGTCAAGGAGGACGACATGGCCA TGGATCACAAGAAGAAGGTGGAGAAGCAGAGGACGCTCAACAGGGAGCGCTCCATTGTCT CTGACCTCAAGCATGGATCTTCTCATGTATGAAAACTAGGAAAGGAATTTTGGGCAAAGC TGAGTCAGTGCATGTAAAGTTATGTACAAAACGATTTATGTTTGAGAATAAATTGGGCCA ATTATAGAATTATGTAAG