Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0490100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24232676:24233936:1 gene:Os08g0490100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 24 description:Similar to PBF protein. (Os08t0490100-01)
Sequence	ATGCAGGAGCAGCAGCCGGAGACCGGCCGCCGGCCGGCGCAGCAGTTCGCCACCGTCGAC CTGCGCCGTCCCAAGGGCTACGCGGCGGCTCCCGCGACGCCACAGCCTGGTTCGGCTGCG ACTGCTGCTGCCGCCGCTGGCCCGGCTGCGACGGCGGCAGCGGCGGCGGCGGGGGAGGGT GACCCGTGCCCGCGGTGCGAGTCGCGGGACACCAAATTCTGCTACTACAACAACTACAAC ACCTCCCAGCCCCGGCACTTCTGCAAGTGTTGCCGCCGCTACTGGACCAAGGGTGGCACG CTCCGCAACGTCCCCGTCGGCGGCGGCACGCGCAAGAAGTCCTCGTCTTCGTCGTCGTCG TCTTCCTCGTCATCCGCCGCCGCCGCAGCACCCGCCGCCAAGCGCCAGAAGACGTCGAAG AAGCGCCGCGTCACGACTCCCGAGCCCCTCGCCGCCACCACCCCCGTCCTCACCGAAGCC GCCGCTGACTCCGCCGCCAAGACGACGACCGAAGCTACGTCGGAGAAGAAGACGACGACT TCCACAACGACGACGACACCGCCGGCGCCTGACACCACGAGCGAGATCACCACGGAGCTC GTCGTCCCGGCCGTGGAGGAGGACTCGTTCACGGACCTCCTGCAGCCGGACTCCGCCGCC GTCACCCTCGGCCTCGACTTCTCCGACTACCCGTCCATCACCAAGAGTCTGGCCGACCCG GACCTGCACTTCGAGTGGCCGCCGCCGGCGTTCGACATGGCGTCCTACTGGCCGGCCGGC GCCGGGTTCGCCGACCCGGACCCGACCGCCGTGTTCCTCAACCTCCCATGA

Peptide Sequence

PEP ID	Os08t0490100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24232676:24233936:1 gene:Os08g0490100 transcript:Os08t0490100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 24 description:Similar to PBF protein. (Os08t0490100-01)
Sequence	MQEQQPETGRRPAQQFATVDLRRPKGYAAAPATPQPGSAATAAAAAGPAATAAAAAAGEG DPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKKSSSSSSS SSSSSAAAAAPAAKRQKTSKKRRVTTPEPLAATTPVLTEAAADSAAKTTTEATSEKKTTT STTTTTPPAPDTTSEITTELVVPAVEEDSFTDLLQPDSAAVTLGLDFSDYPSITKSLADP DLHFEWPPPAFDMASYWPAGAGFADPDPTAVFLNLP

Transcript Sequence

Transcript ID	Os08t0490100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24232676:24233936:1 gene:Os08g0490100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 24 description:Similar to PBF protein. (Os08t0490100-01)
Sequence	ACCTTCGTCGTCACCGCGACTGCGACCATAAGAGACTCCCGCTTCCGCCAACCGCCCACC ACCCGTTCGACCATTTGCTTGCCCCCGCTCCTCGGTTCCTCCCGACTCCACCGGCGCGCG CGCGCGGAGGGACCAGAGCAGCCACGGCGCCGCCGCGCATGCAGGAGCAGCAGCCGGAGA CCGGCCGCCGGCCGGCGCAGCAGTTCGCCACCGTCGACCTGCGCCGTCCCAAGGGCTACG CGGCGGCTCCCGCGACGCCACAGCCTGGTTCGGCTGCGACTGCTGCTGCCGCCGCTGGCC CGGCTGCGACGGCGGCAGCGGCGGCGGCGGGGGAGGGTGACCCGTGCCCGCGGTGCGAGT CGCGGGACACCAAATTCTGCTACTACAACAACTACAACACCTCCCAGCCCCGGCACTTCT GCAAGTGTTGCCGCCGCTACTGGACCAAGGGTGGCACGCTCCGCAACGTCCCCGTCGGCG GCGGCACGCGCAAGAAGTCCTCGTCTTCGTCGTCGTCGTCTTCCTCGTCATCCGCCGCCG CCGCAGCACCCGCCGCCAAGCGCCAGAAGACGTCGAAGAAGCGCCGCGTCACGACTCCCG AGCCCCTCGCCGCCACCACCCCCGTCCTCACCGAAGCCGCCGCTGACTCCGCCGCCAAGA CGACGACCGAAGCTACGTCGGAGAAGAAGACGACGACTTCCACAACGACGACGACACCGC CGGCGCCTGACACCACGAGCGAGATCACCACGGAGCTCGTCGTCCCGGCCGTGGAGGAGG ACTCGTTCACGGACCTCCTGCAGCCGGACTCCGCCGCCGTCACCCTCGGCCTCGACTTCT CCGACTACCCGTCCATCACCAAGAGTCTGGCCGACCCGGACCTGCACTTCGAGTGGCCGC CGCCGGCGTTCGACATGGCGTCCTACTGGCCGGCCGGCGCCGGGTTCGCCGACCCGGACC CGACCGCCGTGTTCCTCAACCTCCCATGAGCCCACTCGCCCGGCGGCGGCGGCGGCGGCT CAGGTGGGTGTGGGGGTTTCCAACTACACCCGATGATGATTTCATCAGTTTCCGATTAAT TAGTAAATTGCGCGTGGGGTATATGGTGAAAATGATGACGTTAATCTTAGCTTTTTGAGA TTAGTGGCCGTGTTTTACTCTCGAGAGGGGCTAACTCAACCAAGTTTGGGTTGTTTTTCA TGTGTATAACTCCTATCAAGGCTTGGGCTTTTTTTTTTCATACAATGGTCCTGCTATTTT C