Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0490000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:24222412:24228652:1 gene:Os08g0490000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 031 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0490000-01);Similar to Transcription factor BIM2. (Os08t0490000-02)
Sequence	ATGGGACTGCAAGGGAATAAGGCGACGCACGACTTCCTCTCGCTGTACGCCGCCGCCGCC ACCGCCACGGACTACTCGCCGCTCCCGCGCCACCCGGACTCCAAGCCCTCGGCGCCGGCG CCGCCGCCCGCTCAAGATTTCTTCCTCAAGACACACGACTTCCTGCCGCAGGTAGAGAAG AGAGCCGACCAGACACCACCGCCGCCGCCGCCGCCGCCGCCCCACGCCGCGGTCACCGCC GAGAAGCAGCTGCTCCACCAGCACGCGTTGGCCGCCGCCGGCGCGTTCACCATCAACCAC GCCGTGGCCGCGGCCGCCACCGCCGTCAAGCAGGAGCCGCCCTTCGCGCCGTGGTGCCAG CCCGTCGCCGCCGTAGATCCCCGAGGTCACCAGTGGTCGCTCCCCTTCGCCGCGCGCGCC GTCGCCGTCGCCTCCTCCAGGCCGCAGCAGCAGCAGCAGCAGCCACCGCCGCCGGAGAGG AAGGGTGGCGGTGGATTCATGGACGCCGGCTCCAGATCCAGTGGCGGCGCGGGCTTCGAC GACGACGACGGCCATGCCGCGCGCCGCGAGGTCTCCTCCTCGCTGAAAGAGCTCACGGTC AGGGTGGAAGGGAAAGGTGGGAGCTGCAGCGGCAGCGCTGGCACGGATCAGATGCCGAAC ACGCCGCGCTCGAAGCACTCCGCCACCGAGCAGCGCAGGCGCAGCAAAATCAACGACAGA TTTCAACTTCTTAGAGACTTATTGCCTCATAATGATCAAAAGAGAGACAAAGCATCATTT CTCTTAGAGGTTATTGAATACATACGGTTTTTACAAGAGAAAGTACAAAAGTATGAGGTT TCATACCCGGAGTGGAACCAAGAAAATGCAAAGGTTGTGCCATGGACAAACATCTATTTC CGTTCTTCCTGGAAAAATGCGCAGAACAAAGGCCAAGTTCCTGCAGATCATTCACCTGAC CCTCCAGAACTTCTGAAAAATGGTTCCCCCTATATGTTCCCTTTTACAGGGAACTCTGAT AATAACAATGCAGTTGAAACTGCAGCTGCTTCAGGTGCACAGGATCAGGCAGAAACTGAT CCAATGAGTCGTGTGTCTTACAGATCAGTGGACACTCCCAGTCCCAATAATGTTGCAGAC AAAGTTACATCTCAGCCACACGCTCAACTGGTGAGACCATCACCTGCAGAGAATCACACA GTAAACTGCGACAAGTTAAATAATTCTGACCTTGCCATCGATGAGGGAACAATCAGTCTA TCAAGCCAATATTCCCAAGAGTTGCTTAACAAGTTGAATCATGCCCTGGAAAACTCGGGT ATAGATTTGTCCCAAGCCAGCATCTCCGTGCAAATAAATCTTGGCAAGAGGGCTATGAAG AGATCTACTCCTGCTGCAACCTCCACTTCTAAGGAGCTCACTGATCCGGCATCTAATAGT CAAGCAATGGGCCGTCAGCTTAGGTTGGGTGATGGCGCTGAAGAACATCGACAAGCCTCA AAGCGACACAAATCAGATAACAGCTGA

Peptide Sequence

PEP ID	Os08t0490000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:24222412:24228652:1 gene:Os08g0490000 transcript:Os08t0490000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 031 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0490000-01);Similar to Transcription factor BIM2. (Os08t0490000-02)
Sequence	MGLQGNKATHDFLSLYAAAATATDYSPLPRHPDSKPSAPAPPPAQDFFLKTHDFLPQVEK RADQTPPPPPPPPPHAAVTAEKQLLHQHALAAAGAFTINHAVAAAATAVKQEPPFAPWCQ PVAAVDPRGHQWSLPFAARAVAVASSRPQQQQQQPPPPERKGGGGFMDAGSRSSGGAGFD DDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDR FQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYF RSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQAETD PMSRVSYRSVDTPSPNNVADKVTSQPHAQLVRPSPAENHTVNCDKLNNSDLAIDEGTISL SSQYSQELLNKLNHALENSGIDLSQASISVQINLGKRAMKRSTPAATSTSKELTDPASNS QAMGRQLRLGDGAEEHRQASKRHKSDNS

Transcript Sequence

Transcript ID	Os08t0490000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24222412:24228652:1 gene:Os08g0490000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 031 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0490000-01);Similar to Transcription factor BIM2. (Os08t0490000-02)
Sequence	GAGAGAGAGGAACTGAGGAAGCGAAGCGAAGCGAGAGAGGAGGAGAAAGCCCGGAGAGCT TGCCCTCGCCGCGCCGCGGAGATCCGCTTCCCCATCCCCCCAACACGTCGCCGCCGCCGC CGCCTTCCTTGCTGCGCGGGGTAATGCGCGGCCATGGGACTGCAAGGGAATAAGGCGACG CACGACTTCCTCTCGCTGTACGCCGCCGCCGCCACCGCCACGGACTACTCGCCGCTCCCG CGCCACCCGGACTCCAAGCCCTCGGCGCCGGCGCCGCCGCCCGCTCAAGATTTCTTCCTC AAGACACACGACTTCCTGCCGCAGGTAGAGAAGAGAGCCGACCAGACACCACCGCCGCCG CCGCCGCCGCCGCCCCACGCCGCGGTCACCGCCGAGAAGCAGCTGCTCCACCAGCACGCG TTGGCCGCCGCCGGCGCGTTCACCATCAACCACGCCGTGGCCGCGGCCGCCACCGCCGTC AAGCAGGAGCCGCCCTTCGCGCCGTGGTGCCAGCCCGTCGCCGCCGTAGATCCCCGAGGT CACCAGTGGTCGCTCCCCTTCGCCGCGCGCGCCGTCGCCGTCGCCTCCTCCAGGCCGCAG CAGCAGCAGCAGCAGCCACCGCCGCCGGAGAGGAAGGGTGGCGGTGGATTCATGGACGCC GGCTCCAGATCCAGTGGCGGCGCGGGCTTCGACGACGACGACGGCCATGCCGCGCGCCGC GAGGTCTCCTCCTCGCTGAAAGAGCTCACGGTCAGGGTGGAAGGGAAAGGTGGGAGCTGC AGCGGCAGCGCTGGCACGGATCAGATGCCGAACACGCCGCGCTCGAAGCACTCCGCCACC GAGCAGCGCAGGCGCAGCAAAATCAACGACAGATTTCAACTTCTTAGAGACTTATTGCCT CATAATGATCAAAAGAGAGACAAAGCATCATTTCTCTTAGAGGTTATTGAATACATACGG TTTTTACAAGAGAAAGTACAAAAGTATGAGGTTTCATACCCGGAGTGGAACCAAGAAAAT GCAAAGGTTGTGCCATGGACAAACATCTATTTCCGTTCTTCCTGGAAAAATGCGCAGAAC AAAGGCCAAGTTCCTGCAGATCATTCACCTGACCCTCCAGAACTTCTGAAAAATGGTTCC CCCTATATGTTCCCTTTTACAGGGAACTCTGATAATAACAATGCAGTTGAAACTGCAGCT GCTTCAGGTGCACAGGATCAGGCAGAAACTGATCCAATGAGTCGTGTGTCTTACAGATCA GTGGACACTCCCAGTCCCAATAATGTTGCAGACAAAGTTACATCTCAGCCACACGCTCAA CTGGTGAGACCATCACCTGCAGAGAATCACACAGTAAACTGCGACAAGTTAAATAATTCT GACCTTGCCATCGATGAGGGAACAATCAGTCTATCAAGCCAATATTCCCAAGAGTTGCTT AACAAGTTGAATCATGCCCTGGAAAACTCGGGTATAGATTTGTCCCAAGCCAGCATCTCC GTGCAAATAAATCTTGGCAAGAGGGCTATGAAGAGATCTACTCCTGCTGCAACCTCCACT TCTAAGGAGCTCACTGATCCGGCATCTAATAGTCAAGCAATGGGCCGTCAGCTTAGGTTG GGTGATGGCGCTGAAGAACATCGACAAGCCTCAAAGCGACACAAATCAGATAACAGCTGA TGGTTTGCTCCTGAAAACCCCAGATATTCAACCATTTTTTGCTCCTAACTGTGTACGGGG AGCCCCAAGGTTTTATGTATATTAAGTTTACCTGTGACGTCTCGACAAAACAAGGCCTTG ATGTATTCTTTCATTTAATCACTTCGCCGTTCTAGCCCCTAGGGAAGAAAGGAAGCTTCC ATTGCAGATTGTGAAGCTGCTTTTGTCCATATGCTTCCATTCATATGAGAAGTTTCTCCC ACCCTCTGACAGAATGTCTTTTGTAACATAATTCAGAAATGAGCTATCCAAAGTTCCATC