Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0487700-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:24121898:24123906:1 gene:Os08g0487700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 087 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0487700-00)
Sequence	ATGGATGCTAATGGCGGCAATGGGTTTGGAGTAGAGAGCAACGCTTCGGCTGTCCATGGT GGCATGGCGATGGCTTGGCAATGGCATGGCGGCCAGATGAGCGGCGGCAGCTCGTGCGCT GCGGCGCCGCCGCCGGTGCAACAGCCGGCGATGGATTCTCTCGCGTGGTCGTCGACGGTC TCGCCGAGCACCGGCGCTGCCACGGCGGCGAGCGGCGCCGGCTTCTTGCTGCCACCGGCA GCCGTGCGCGGCGGCTTCGGCAGTTTCCCGGTCAACTCCGGCGGCATCGTCGAGCCGGCC GGTGACTGCTCGTCGGAGTCCAAGAAGAGGAGATCAGACGAGATTGCTGGAACGGATCAC GCGAACGCATCGAACGCGCTTGCCGATTCTGGGAACGAGACCGAGTGTAGCAAAGATGTC AACGGCGAAGTGATCGGCCCGCCGGCGACGGCGGCGGCCGGCGGCAAGTCGAAAGGGAAG GGAGCCAAGGACGCCGGCGAGGCGCAGAAGGAAGGGTACAGCCATGTCAGAGCTCGGAAG GGGCAGGCAACCAACAACCACAGCTTAGCAGAGAGGGTCACCGGGAAGGCGTTGATGCTC GACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTCGAGTTTCTGTCGATGAAG CTCTCGGCAGTCAACCCAAGAATCGATCTCGACATTGAATCACTTGTCAACAATTCCAAG GATGTTCTTCGTTTTCCCGGGCAGCCTTCCTCTGCTCCCATGGGATTCTCCTTCTCCACG GAGATGATGCCGGGGCTACAATTATCACGACCGGGCATCCTTCAGGGAGGTGTCCATGGC ATGATCAATCCAGATGTGTTCACCAGCCTCATGCAGAAGCAGCAGCAAAATGACAAGGGA GCATTCAGAGAGCCTCAGATGCATCAGACTTTGGATGGATCATTCCGTAACACCGCACAA ATGCCGTATCCACAGGTCATGAGTTCAGAAGAGCTAAGCATCAGGCAAGATCAAGATGGG TTTCACATGTGA

Peptide Sequence

PEP ID	Os08t0487700-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:24121898:24123906:1 gene:Os08g0487700 transcript:Os08t0487700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 087 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0487700-00)
Sequence	MDANGGNGFGVESNASAVHGGMAMAWQWHGGQMSGGSSCAAAPPPVQQPAMDSLAWSSTV SPSTGAATAASGAGFLLPPAAVRGGFGSFPVNSGGIVEPAGDCSSESKKRRSDEIAGTDH ANASNALADSGNETECSKDVNGEVIGPPATAAAGGKSKGKGAKDAGEAQKEGYSHVRARK GQATNNHSLAERVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSK DVLRFPGQPSSAPMGFSFSTEMMPGLQLSRPGILQGGVHGMINPDVFTSLMQKQQQNDKG AFREPQMHQTLDGSFRNTAQMPYPQVMSSEELSIRQDQDGFHM

Transcript Sequence

Transcript ID	Os08t0487700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24121898:24123906:1 gene:Os08g0487700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 087 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0487700-00)
Sequence	ATGGATGCTAATGGCGGCAATGGGTTTGGAGTAGAGAGCAACGCTTCGGCTGTCCATGGT GGCATGGCGATGGCTTGGCAATGGCATGGCGGCCAGATGAGCGGCGGCAGCTCGTGCGCT GCGGCGCCGCCGCCGGTGCAACAGCCGGCGATGGATTCTCTCGCGTGGTCGTCGACGGTC TCGCCGAGCACCGGCGCTGCCACGGCGGCGAGCGGCGCCGGCTTCTTGCTGCCACCGGCA GCCGTGCGCGGCGGCTTCGGCAGTTTCCCGGTCAACTCCGGCGGCATCGTCGAGCCGGCC GGTGACTGCTCGTCGGAGTCCAAGAAGAGGAGATCAGACGAGATTGCTGGAACGGATCAC GCGAACGCATCGAACGCGCTTGCCGATTCTGGGAACGAGACCGAGTGTAGCAAAGATGTC AACGGCGAAGTGATCGGCCCGCCGGCGACGGCGGCGGCCGGCGGCAAGTCGAAAGGGAAG GGAGCCAAGGACGCCGGCGAGGCGCAGAAGGAAGGGTACAGCCATGTCAGAGCTCGGAAG GGGCAGGCAACCAACAACCACAGCTTAGCAGAGAGGGTCACCGGGAAGGCGTTGATGCTC GACGAGATCATCAACTATGTTCAGTCCCTGCAAAGACAAGTCGAGTTTCTGTCGATGAAG CTCTCGGCAGTCAACCCAAGAATCGATCTCGACATTGAATCACTTGTCAACAATTCCAAG GATGTTCTTCGTTTTCCCGGGCAGCCTTCCTCTGCTCCCATGGGATTCTCCTTCTCCACG GAGATGATGCCGGGGCTACAATTATCACGACCGGGCATCCTTCAGGGAGGTGTCCATGGC ATGATCAATCCAGATGTGTTCACCAGCCTCATGCAGAAGCAGCAGCAAAATGACAAGGGA GCATTCAGAGAGCCTCAGATGCATCAGACTTTGGATGGATCATTCCGTAACACCGCACAA ATGCCGTATCCACAGGTCATGAGTTCAGAAGAGCTAAGCATCAGGCAAGATCAAGATGGG TTTCACATGTGA