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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0487000-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:24079677:24082209:1 gene:Os08g0487000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0487000-01);Conserved hypothetical protein. (Os08t0487000-02)
Sequence

ATGCCGTCCTCCCCGTGGATCCCCACCGCCGGCGCTCCGCCGCCGCGGGCAGCGCCGGCC
GTGGTCTACTCCTGGCTGTCGGAGCGCCACCCTGTCAAGGAGGCAGGAGCAGGAGCAGGC
GCTTCCAACGCGCAGGAGTCCAGGCCCCGCGTTTCTCCGGCGGAGAACTCTGAAGTGGAA
ACCCGAGAGCATGAAGAGAAGGTCAACAAATATCAGGCTGTCCTTGCAGCTCGTTTGAAG
GCCAAATACTTTTCTGGCAAGGCTTTTGGTAAAGAAAATGTGTTTGAAGAAATGACTATC
CAGTCTGAGACCATTCTGTTAAGCAGGTGCCCGTTTTCAAGTTTATTTGCAGATCCAGCA
AAATTTTGCCGGGAGAAGAGCTGTACTAAAGAGGACATTTATCCATCTTTGACAAATGCC
TCCTTTGCCAAGCATAACCATTTATCTCTAGTTCGTGAAGACTCGTCGAAGTAA

Peptide Sequence

PEP ID

Os08t0487000-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:24079677:24082209:1 gene:Os08g0487000 transcript:Os08t0487000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0487000-01);Conserved hypothetical protein. (Os08t0487000-02)
Sequence

MPSSPWIPTAGAPPPRAAPAVVYSWLSERHPVKEAGAGAGASNAQESRPRVSPAENSEVE
TREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMTIQSETILLSRCPFSSLFADPA
KFCREKSCTKEDIYPSLTNASFAKHNHLSLVREDSSK

Transcript Sequence

Transcript ID

Os08t0487000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24079677:24082209:1 gene:Os08g0487000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0487000-01);Conserved hypothetical protein. (Os08t0487000-02)
Sequence

GCCGGCCTTCCAAATGCCGTCCTCCCCGTGGATCCCCACCGCCGGCGCTCCGCCGCCGCG
GGCAGCGCCGGCCGTGGTCTACTCCTGGCTGTCGGAGCGCCACCCTGTCAAGGAGGCAGG
AGCAGGAGCAGGCGCTTCCAACGCGCAGGAGTCCAGGCCCCGCGTTTCTCCGGCGGAGAA
CTCTGAAGTGGAAACCCGAGAGCATGAAGAGAAGGTCAACAAATATCAGGCTGTCCTTGC
AGCTCGTTTGAAGGCCAAATACTTTTCTGGCAAGGCTTTTGGTAAAGAAAATGTGTTTGA
AGAAATGACTATCCAGTCTGAGACCATTCTGTTAAGCAGGTGCCCGTTTTCAAGTTTATT
TGCAGATCCAGCAAAATTTTGCCGGGAGAAGAGCTGTACTAAAGAGGACATTTATCCATC
TTTGACAAATGCCTCCTTTGCCAAGCATAACCATTTATCTCTAGTTCGTGAAGACTCGTC
GAAGTAATTAGCGGACAGTTTGTCTGCAGAAAACTCTTAACACCTGCCAAGTGGCACCTG
TCTATCAATACCACCTAATGGATGAGGGTTGGGTAGTTACATTATTAACTACATATGTTA
TCCTTAAACTAAATGAACTGAAACATGTAAAATATCAACAGGCCTAATTTAACTTGAGAG
TTTAGTTTCTTCTTGTAGGCCTGTTGAGCATATAGATAGCTATGAACTTAACTCTATGCA
AAACAATGCTCATATTGAGATTATTCCTCTAGGGGGATGTCTCCAACATTTTACCTG