Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0486700-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24073711:24074599:1 gene:Os08g0486700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0486700-01)
Sequence

ATGGAGTCATCCCATATCACTGGGGATGATGGCGAGGGCTGCAACAGCAGCGAGTCCGGG
TGGACAATGTACCTTGCCTCTCCCATGCACGGCGACGATGACGGCGGCGGCAAAAGGAGC
GGCAGCGAAGGAAGCAATGTTGATGATGGCTATGGCTACATCAGCGGTCGGGGAAGCCGC
AAGGAGTATGAAGACGACGGCGATGGCGACGACGACGATTCCCTCGCCTCCGATGCTTCA
ACCGGTCCGGCCAAAGTGAAGGTGCCTTCCGCACCGGACGGCGATGACGCCGGCGGCCGT
CGGAAGCACGACGGCGACGAAGACGGCGGCGGCAAGGGGGAGGAGGAGGAGGAAGAAGAT
CATGGCTTGCACACCAAATTCTCGATGAGCTCCGGCAAGAAAGCCGGCAAGACGGAGAAA
GGAGGAGAAGGGAAGTCCTCCAAGAAAGGCCAGAACAAGAGAGGAAGCTCATCAAGAACA
AGATTCTTTTGGTAA

Peptide Sequence

PEP ID

Os08t0486700-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24073711:24074599:1 gene:Os08g0486700 transcript:Os08t0486700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0486700-01)
Sequence

MESSHITGDDGEGCNSSESGWTMYLASPMHGDDDGGGKRSGSEGSNVDDGYGYISGRGSR
KEYEDDGDGDDDDSLASDASTGPAKVKVPSAPDGDDAGGRRKHDGDEDGGGKGEEEEEED
HGLHTKFSMSSGKKAGKTEKGGEGKSSKKGQNKRGSSSRTRFFW

Transcript Sequence

Transcript ID

Os08t0486700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24073711:24074599:1 gene:Os08g0486700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0486700-01)
Sequence

ATTCTCTCTCAAACTCAAAGCTCCCTCCTCCAACTATCTCACCTTCCTTCTATTCTATTC
TATTCCCTCTGGCTTAGCTTGTTTTTATCAGTTCTTACCTTTCTTGATTCTCCTCTCCTC
TCCTCTGCCATGGAGTCATCCCATATCACTGGGGATGATGGCGAGGGCTGCAACAGCAGC
GAGTCCGGGTGGACAATGTACCTTGCCTCTCCCATGCACGGCGACGATGACGGCGGCGGC
AAAAGGAGCGGCAGCGAAGGAAGCAATGTTGATGATGGCTATGGCTACATCAGCGGTCGG
GGAAGCCGCAAGGAGTATGAAGACGACGGCGATGGCGACGACGACGATTCCCTCGCCTCC
GATGCTTCAACCGGTCCGGCCAAAGTGAAGGTGCCTTCCGCACCGGACGGCGATGACGCC
GGCGGCCGTCGGAAGCACGACGGCGACGAAGACGGCGGCGGCAAGGGGGAGGAGGAGGAG
GAAGAAGATCATGGCTTGCACACCAAATTCTCGATGAGCTCCGGCAAGAAAGCCGGCAAG
ACGGAGAAAGGAGGAGAAGGGAAGTCCTCCAAGAAAGGCCAGAACAAGAGAGGAAGCTCA
TCAAGAACAAGATTCTTTTGGTAATGGCTTTCTAAAATGCATTAGAATCGCTGTACTAGG
AATCTCTCTTTTCAGTTTCTTGGTAAGATTGAATCCTTGCTAGGAGTATGCATGCATGGA
GAAAGGAAGGCTTTTTTTGGATCCTTGTTTTTGCCTTCCATAGAGCTTCTCCCATGGTTG
ACCACCCAGTAGTAGGTTAACTGTTGCCGCCATGTAAATCTACTGTAACCTTCGGTTATT
CTTCAATGCCCTGCCTTTAATGTCGCTTGCAGAGCTTGCAATCTTCTCC