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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0485800-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:24020865:24022693:-1 gene:Os08g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Barwin-related endoglucanase domain containing protein. (Os08t0485800-01)
Sequence

ATGGCAATCAGCAGAAGGAGCTCCATGCTGTTGGTGATGGCCTTAGTGCTTGGGACGGTC
TCCCTTGCCACGGCCGCATCTGGAGTCGCCACCTTCTACACTCAATACACACCGTCGGCG
TGCTACGGGAACAGGAACATGGGGAACATGGTGGCGGCGGCGAACGACAGGTTGTACAAC
AACGGCGCCGTGTGCGGGCGGTGCTACGCCGTGAAGTGCGCCGGCGCGGCGGCCGGCGGC
GGCGGAGGCAACCCCTGCACCGGCGCCAGCGTCACCGTGAAGATGGTCGACAACTGCGCC
AGCAGCGACGGGTGCACGAGCACCATCGACCTCTCCAGGGAGGCCTTCGCCAAGATCGCC
AACCTCGACGCCGGCGTCATCAGGATCACCTACAACCCAACGGTATGTCCGTAG

Peptide Sequence

PEP ID

Os08t0485800-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:24020865:24022693:-1 gene:Os08g0485800 transcript:Os08t0485800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Barwin-related endoglucanase domain containing protein. (Os08t0485800-01)
Sequence

MAISRRSSMLLVMALVLGTVSLATAASGVATFYTQYTPSACYGNRNMGNMVAAANDRLYN
NGAVCGRCYAVKCAGAAAGGGGGNPCTGASVTVKMVDNCASSDGCTSTIDLSREAFAKIA
NLDAGVIRITYNPTVCP

Transcript Sequence

Transcript ID

Os08t0485800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:24020865:24022693:-1 gene:Os08g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Barwin-related endoglucanase domain containing protein. (Os08t0485800-01)
Sequence

GGTGTGTGCTTTGCGGTATTAACTCGTGCTTTCCCTTCAGTAGTTAAGCGTAGAGAATTT
GAGGCCATGGCAATCAGCAGAAGGAGCTCCATGCTGTTGGTGATGGCCTTAGTGCTTGGG
ACGGTCTCCCTTGCCACGGCCGCATCTGGAGTCGCCACCTTCTACACTCAATACACACCG
TCGGCGTGCTACGGGAACAGGAACATGGGGAACATGGTGGCGGCGGCGAACGACAGGTTG
TACAACAACGGCGCCGTGTGCGGGCGGTGCTACGCCGTGAAGTGCGCCGGCGCGGCGGCC
GGCGGCGGCGGAGGCAACCCCTGCACCGGCGCCAGCGTCACCGTGAAGATGGTCGACAAC
TGCGCCAGCAGCGACGGGTGCACGAGCACCATCGACCTCTCCAGGGAGGCCTTCGCCAAG
ATCGCCAACCTCGACGCCGGCGTCATCAGGATCACCTACAACCCAACGGTATGTCCGTAG
AGTTTCGGAGCTACTTCCTCCATTTCACAATATAAGTCATTCTAGTATTTTCCACATTAA
CATCAATGTATCTAGATTCATTAATATCAAAATAAATGTGGAAAATGCTAGAATAACTTA
CATTGTGAAATGGAGGGAGTAGACCATATAATTATTATTATGGTCATCACATTTGCCACG
TCGAGGCAAGAACCCAAGAAGGATAGATATTTCAGATTTTCAGTAGTAATATAACGCAAT
AATGTTCCTGGAAGAAAAATATAAGAGGAATGTAATAATGTTGGGTTCTGTTAACCCTAG
CGGTTATGTCATCGTTAAATAAAAGAAAGGAATGTAATAATGTTGGGTTCTGTT