Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0485700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:24015770:24020559:1 gene:Os08g0485700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485700-01);Hypothetical conserved gene. (Os08t0485700-02)
Sequence	GTGAGCCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCC AGCGGGTGGAGGCTGCAGCTTGGGATCAAGCGGAAGGACCGCAAGGCCTGGGTGAACTGC TTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATAC CTCATGTCCCTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACA CAACAACATGGCTTGTGTGCTGACGATGGTGTTAATGTTTTAGGTGTTCAACACCAAATT GGTACAGGTATGGACAGTCAAAGTATTTTGCCAGTTGCTTCTATTACCTTTTCTAGTCAT TCAAGAGATCAAGACGAAACAGATGCAGATGATATAAATTCTTATGAATGTCAACAATGC AATTTAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAATG GGTTCTAAAAGGCGTAAGATTAACAAGGTTGGCAAATTTGGTGAGCCAGTGATAGGCAAA GATGGGAAATTTGAATGCCCAGTATGTAATAAGACGTTTGAGGAACAGTCACGGTACTTT GGTCACGTTGGATCCCATGCAAAGTATCACGGGCTGACTCCTGAAGCATTCCTACAAACC TTGTCAGGAAAGGTTGGTAACGATTCTTTTGCAGGTTTGTCATGTAGCCTTCAAGATTTG GTCGGATCACCACAACTGAATGAGAAGACTACTGCTAGTGAAGCACGATCACAGCATCAC AATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAAT TGTCCAGCTAACTTCAATGGGCATAATCAAACTTGGTGTAGACCTGATGAAATTCCTCCC ACCACAGATGCTCCAAGCACATGGACTTATAGAAATAATGTGACGAACTGTGCTGATAGA ACTGTTCCGAGAACAGCACCTCAGCCCAATGATCACATGGATTGCAGGGTTAGTGGCTTT GCTGAAGCAACTAATTTTAACGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTCCTCC TTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAG CATGCTGAGGTTAATAATAGTATGAAATCAAGAGATGTCAACCTCAATTCACGCCTGAAC ACAATATCCTTTCCTATTGCAACTGCGAACAATGAAACATCGACTGCCCTTAATGACGTG AATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCT GCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTCCTAGCTCCCTCGGTGTA GCTGACAGATCATCTATTGCTGCAAGATCTTTCAATGCTGGTTATGTTAATGAAAATGGT GCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAGACAAGTTTG GCCATGCGCCCAGTCTCTCCTTGTGATCTGCAACTTGGATTTAGTGGTCAGAAGCAGCAG ATATTGCCTGGTTATGGAGAACTTAGACCAGCTGCGTCTGGGTCCCCTCAGCTTGGGGGC ATGGCAGCAAACAGTTCAATTCCCACCAGACCCTCTCAGCCGCAGTTTGGGAGTATGGCC AGAACCGATGCTTTGCCTACTGGACCCTCTCAACCAGGGAGCTTGGCCAGACCTAATTTT GTGCCCACAGGATTTTCTCAGTTTGCAAGCAGGCCACCTACTTCTGTACCACCAGCCGAT TCCTCTCAGTTTGCAGGGGGCATGGCCAGGCAAAACATTCCGACCACGTCTGAACCAACT CTAGTATTGGGCTATACTCCTCAGATGGTCAATGGCCCTCCAGCCCAGCTAGGATGGGAT CTATCTTTGTCAAGGATGGTCAGTGAAGGCATGCTCCCAGTGTTATGTATATGGTGCAAC AGCCAATTCCACCATTTTGGCCCCATTGATGCACAGCAATCTGGTTCGTTTGGTTTCATT TGCCCAGCTTGCAAGGAGAAGATGTCAGGCAATCCTAATGCGCCCAATAACGGTCCATGG CAACCATGA

Peptide Sequence

PEP ID	Os08t0485700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:24015770:24020559:1 gene:Os08g0485700 transcript:Os08t0485700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485700-01);Hypothetical conserved gene. (Os08t0485700-02)
Sequence	VSQRMRRKLVDASFFGDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAY LMSLLGYPEFKTDNIEYGSTQQHGLCADDGVNVLGVQHQIGTGMDSQSILPVASITFSSH SRDQDETDADDINSYECQQCNLTFHGQSAYAHHLITFHKMGSKRRKINKVGKFGEPVIGK DGKFECPVCNKTFEEQSRYFGHVGSHAKYHGLTPEAFLQTLSGKVGNDSFAGLSCSLQDL VGSPQLNEKTTASEARSQHHNCSTKHGGNSTRGIDLFNSNCPANFNGHNQTWCRPDEIPP TTDAPSTWTYRNNVTNCADRTVPRTAPQPNDHMDCRVSGFAEATNFNDQAGRHQGFRPSS FGTTNHCQGQIIDHAVAASKHAEVNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDV NRSCITGKGFSGSFSNNDGAASIVLPSSGLNNKIPSSLGVADRSSIAARSFNAGYVNENG ASEANNIGNKNNTMVYQTSLAMRPVSPCDLQLGFSGQKQQILPGYGELRPAASGSPQLGG MAANSSIPTRPSQPQFGSMARTDALPTGPSQPGSLARPNFVPTGFSQFASRPPTSVPPAD SSQFAGGMARQNIPTTSEPTLVLGYTPQMVNGPPAQLGWDLSLSRMVSEGMLPVLCIWCN SQFHHFGPIDAQQSGSFGFICPACKEKMSGNPNAPNNGPWQP

Transcript Sequence

Transcript ID	Os08t0485700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24015770:24020559:1 gene:Os08g0485700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485700-01);Hypothetical conserved gene. (Os08t0485700-02)
Sequence	GGTGAGCCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCC CAGCGGGTGGAGGCTGCAGCTTGGGATCAAGCGGAAGGACCGCAAGGCCTGGGTGAACTG CTTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATA CCTCATGTCCCTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCAC ACAACAACATGGCTTGTGTGCTGACGATGGTGTTAATGTTTTAGGTGTTCAACACCAAAT TGGTACAGGTATGGACAGTCAAAGTATTTTGCCAGTTGCTTCTATTACCTTTTCTAGTCA TTCAAGAGATCAAGACGAAACAGATGCAGATGATATAAATTCTTATGAATGTCAACAATG CAATTTAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAAT GGGTTCTAAAAGGCGTAAGATTAACAAGGTTGGCAAATTTGGTGAGCCAGTGATAGGCAA AGATGGGAAATTTGAATGCCCAGTATGTAATAAGACGTTTGAGGAACAGTCACGGTACTT TGGTCACGTTGGATCCCATGCAAAGTATCACGGGCTGACTCCTGAAGCATTCCTACAAAC CTTGTCAGGAAAGGTTGGTAACGATTCTTTTGCAGGTTTGTCATGTAGCCTTCAAGATTT GGTCGGATCACCACAACTGAATGAGAAGACTACTGCTAGTGAAGCACGATCACAGCATCA CAATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAA TTGTCCAGCTAACTTCAATGGGCATAATCAAACTTGGTGTAGACCTGATGAAATTCCTCC CACCACAGATGCTCCAAGCACATGGACTTATAGAAATAATGTGACGAACTGTGCTGATAG AACTGTTCCGAGAACAGCACCTCAGCCCAATGATCACATGGATTGCAGGGTTAGTGGCTT TGCTGAAGCAACTAATTTTAACGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTCCTC CTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAA GCATGCTGAGGTTAATAATAGTATGAAATCAAGAGATGTCAACCTCAATTCACGCCTGAA CACAATATCCTTTCCTATTGCAACTGCGAACAATGAAACATCGACTGCCCTTAATGACGT GAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGC TGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTCCTAGCTCCCTCGGTGT AGCTGACAGATCATCTATTGCTGCAAGATCTTTCAATGCTGGTTATGTTAATGAAAATGG TGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAGACAAGTTT GGCCATGCGCCCAGTCTCTCCTTGTGATCTGCAACTTGGATTTAGTGGTCAGAAGCAGCA GATATTGCCTGGTTATGGAGAACTTAGACCAGCTGCGTCTGGGTCCCCTCAGCTTGGGGG CATGGCAGCAAACAGTTCAATTCCCACCAGACCCTCTCAGCCGCAGTTTGGGAGTATGGC CAGAACCGATGCTTTGCCTACTGGACCCTCTCAACCAGGGAGCTTGGCCAGACCTAATTT TGTGCCCACAGGATTTTCTCAGTTTGCAAGCAGGCCACCTACTTCTGTACCACCAGCCGA TTCCTCTCAGTTTGCAGGGGGCATGGCCAGGCAAAACATTCCGACCACGTCTGAACCAAC TCTAGTATTGGGCTATACTCCTCAGATGGTCAATGGCCCTCCAGCCCAGCTAGGATGGGA TCTATCTTTGTCAAGGATGGTCAGTGAAGGCATGCTCCCAGTGTTATGTATATGGTGCAA CAGCCAATTCCACCATTTTGGCCCCATTGATGCACAGCAATCTGGTTCGTTTGGTTTCAT TTGCCCAGCTTGCAAGGAGAAGATGTCAGGCAATCCTAATGCGCCCAATAACGGTCCATG GCAACCATGATAACTGTTGTGGCTGGTCTACAATCATTTCTGTTGCTGGATCTTTGGTCT AAGGTTAGCTGCGGTGTGCCTGCACCCCAGAGTTTTAGTAGGGTATCTAGGAACGATGTC TGTATTTTGTGGACTCTCTTCTGTACGTACTTCTGTTGAAATGTGAAGAAAACCCCAAGA GAAAAACCCACTGAATGTTGTACTTTTGGCAGGATGGATCTCCAGTAAGATTCAAGGGTT GTACGCAGCCATCATCCAAAAAGAGTTTATGAGATAGATTTTGATGT