Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0485600-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:24002874:24008410:1 gene:Os08g0485600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485600-01);Methyl-CpG DNA binding domain containing protein. (Os08t0485600-02);Hypothetical conserved gene. (Os08t0485600-03);Hypothetical conserved gene. (Os08t0485600-04)
Sequence	ATGGAGACGGAGGTGTTCCCCGTGGTTGACCTCCGCGTGCTCACGCAGTCCGATCTGGAC GAGCTCGCCGCCGCCTCCGCCCACGCCGTGGACCCGCGGAGCAGCTGCCCCGACCGCGCC GTCTTCAACGAGAGCGCCGGCTCGCGTAAGCAGACCTTCTCCCGCGTCCGCTTCGTCCCC GCCGCCGCCGCCGCCGCTGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCCAAGCTGCCC AGGGGCAACGACAAGGAGGACAGCTTCATCGCCTACCACCTCCGCCGCCTCTTCGCGCCC GACGACCCCTCCCTCATCGAGAACCCCTCCTTTCCCCAAACCCAAACCCTAGCTCGGTCG CCGTCTCCCGACCCCGACCAGTTGACCACCAACTCCAGGGGGGTCTCCGTTGATCTGGTG AGCCTCTCACGGCTTGCCGACCCGTACGACGCGGAGCTCGGGAAGCGGACTGCCAGGATG ACCACGGAGGAGGAGCTCATGGGCTTCATCTCTAGCCTCGCGGGTCAGTGGGTGAACCAG AGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCCAGCGGGTGG AGGCTGCAGCTTGGGATCGAGCGGAAGGACCGCAAGGCCTGGGTGAACTGCTTCAGTTAT GTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATACCTCATGTCA CTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACACAACAACAT GGCTTGTGTGCTGACGATGGTGTTAATGTTTTAGGTGTTCAACACCAAATTGGTACAAGT ATGGACAGTCAAAGTAATTTGCCAGTTGCTTCTGCTACTTTTTATAGTCATTCAAGAGAT CAAGACGAAACGGTTGCAGATGATATAAATTCTTATGAATGTCAACAATGCAATTTAACT TTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAGTGAGTTCTAAG AGGCGTAAGAGTAACAAGGTTAGCAAATTTGGTGAGCCAGTGATAGGCAAAGATGGGAAA TTTGAATGCCCAGTATGTAACAAGACGTTTGAGGAACAGTCACGGTACTTTGGTCACATT GGATCCCATGCAAAGTATCAGGGGCTGACTCCTGAAGCATTCCTACAAACCTTTTCAGGA AAGGTTGGTAACAATTCTTTTGCAGGTTTGTCATCTAGCCTTCAAGTATTGGTCGGATCA CCACAACTGAATGAGAAGACTACTGCTTGTGAAGCACGATCGCAGCATCACGATTGTTCA ACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAATCATCCTGCT AACTTCAATGGGCATAATCAATCTTGGTGTAGATCTGATGAAATTCCTCCCACCACAGAA GCTCAAAGCACATGGACTTATAGAAATAATGAGATGAACTGTGCTGATAGAACTGTTCCG AGAACAGTACCTCAGCCCAATGATCACGAGGATTGCAGGGTTAGTGGCTTTGCTGAAGCA ACTAATTTTAATGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTTCTCCTTTGGAACT ACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAGCATGCTGAG GTTAATAATAGTATGAAATCAAGAGATGTCAACCTCAATTCACGCCTGAACACAATATCC TTTCCTATTGCAACTGCAAACAATGAAACATCGACTGCCCTTAATGACGTGAATCGGTCA TGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCTGCATCTATC GTGTTGCCCAGTTCTGGATTAAACAATAAAATTTCTAGCTCCCTCGGTGTAGCTGACAGA TCATCTATTGCTGCCAGATCCTTCAATGCTGGTTATGTTTATGAAAATGGCGCTTCTGAA GCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAAACAAGTTTGGCCATGCGT CCACTCTCTCCTGGCAAACAAAGCAGCGGCGTTGCTTCGAGAAGGACAGCCGCTGTGGTG TCCGAGCGGCATGGAGGCCAAGTTGTGAGACACCCACGGACTGCTTCATCAGTTTACATG CCTGAGCAAGGTCCTGGATGGTTGTGA

Peptide Sequence

PEP ID	Os08t0485600-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:24002874:24008410:1 gene:Os08g0485600 transcript:Os08t0485600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485600-01);Methyl-CpG DNA binding domain containing protein. (Os08t0485600-02);Hypothetical conserved gene. (Os08t0485600-03);Hypothetical conserved gene. (Os08t0485600-04)
Sequence	METEVFPVVDLRVLTQSDLDELAAASAHAVDPRSSCPDRAVFNESAGSRKQTFSRVRFVP AAAAAAAAASASAAAAAKLPRGNDKEDSFIAYHLRRLFAPDDPSLIENPSFPQTQTLARS PSPDPDQLTTNSRGVSVDLVSLSRLADPYDAELGKRTARMTTEEELMGFISSLAGQWVNQ RMRRKLVDASFFGDHLPSGWRLQLGIERKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMS LLGYPEFKTDNIEYGSTQQHGLCADDGVNVLGVQHQIGTSMDSQSNLPVASATFYSHSRD QDETVADDINSYECQQCNLTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGK FECPVCNKTFEEQSRYFGHIGSHAKYQGLTPEAFLQTFSGKVGNNSFAGLSSSLQVLVGS PQLNEKTTACEARSQHHDCSTKHGGNSTRGIDLFNSNHPANFNGHNQSWCRSDEIPPTTE AQSTWTYRNNEMNCADRTVPRTVPQPNDHEDCRVSGFAEATNFNDQAGRHQGFRPFSFGT TNHCQGQIIDHAVAASKHAEVNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDVNRS CITGKGFSGSFSNNDGAASIVLPSSGLNNKISSSLGVADRSSIAARSFNAGYVYENGASE ANNIGNKNNTMVYQTSLAMRPLSPGKQSSGVASRRTAAVVSERHGGQVVRHPRTASSVYM PEQGPGWL

Transcript Sequence

Transcript ID	Os08t0485600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:24002874:24008410:1 gene:Os08g0485600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG DNA binding domain containing protein. (Os08t0485600-01);Methyl-CpG DNA binding domain containing protein. (Os08t0485600-02);Hypothetical conserved gene. (Os08t0485600-03);Hypothetical conserved gene. (Os08t0485600-04)
Sequence	GGAGCCCCAACTACGCCGCCAGCCCGCCATCTCATCCCCCGGCGAGCGACACGGTCGCAT CCCACCTGAGCTCCGACCGCCGCAGCGGCGGTCGCCTCGCCGGAGCAGAAGCCGCGCGTG GGGGGGAAGGCGGAGGAGGGGAGGGGTTCAATGGAGACGGAGGTGTTCCCCGTGGTTGAC CTCCGCGTGCTCACGCAGTCCGATCTGGACGAGCTCGCCGCCGCCTCCGCCCACGCCGTG GACCCGCGGAGCAGCTGCCCCGACCGCGCCGTCTTCAACGAGAGCGCCGGCTCGCGTAAG CAGACCTTCTCCCGCGTCCGCTTCGTCCCCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCC GCCTCCGCCGCCGCCGCCGCCAAGCTGCCCAGGGGCAACGACAAGGAGGACAGCTTCATC GCCTACCACCTCCGCCGCCTCTTCGCGCCCGACGACCCCTCCCTCATCGAGAACCCCTCC TTTCCCCAAACCCAAACCCTAGCTCGGTCGCCGTCTCCCGACCCCGACCAGTTGACCACC AACTCCAGGGGGGTCTCCGTTGATCTGGTGAGCCTCTCACGGCTTGCCGACCCGTACGAC GCGGAGCTCGGGAAGCGGACTGCCAGGATGACCACGGAGGAGGAGCTCATGGGCTTCATC TCTAGCCTCGCGGGTCAGTGGGTGAACCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCC TTCTTCGGGGATCACCTCCCCAGCGGGTGGAGGCTGCAGCTTGGGATCGAGCGGAAGGAC CGCAAGGCCTGGGTGAACTGCTTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACT TGCCAAGAGGTTTCTGCATACCTCATGTCACTTCTTGGGTATCCGGAGTTCAAAACGGAT AATATTGAGTATGGTAGCACACAACAACATGGCTTGTGTGCTGACGATGGTGTTAATGTT TTAGGTGTTCAACACCAAATTGGTACAAGTATGGACAGTCAAAGTAATTTGCCAGTTGCT TCTGCTACTTTTTATAGTCATTCAAGAGATCAAGACGAAACGGTTGCAGATGATATAAAT TCTTATGAATGTCAACAATGCAATTTAACTTTTCATGGTCAGAGTGCCTATGCGCATCAC CTGATCACTTTTCACAAAGTGAGTTCTAAGAGGCGTAAGAGTAACAAGGTTAGCAAATTT GGTGAGCCAGTGATAGGCAAAGATGGGAAATTTGAATGCCCAGTATGTAACAAGACGTTT GAGGAACAGTCACGGTACTTTGGTCACATTGGATCCCATGCAAAGTATCAGGGGCTGACT CCTGAAGCATTCCTACAAACCTTTTCAGGAAAGGTTGGTAACAATTCTTTTGCAGGTTTG TCATCTAGCCTTCAAGTATTGGTCGGATCACCACAACTGAATGAGAAGACTACTGCTTGT GAAGCACGATCGCAGCATCACGATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGT ATAGACCTTTTTAACTCAAATCATCCTGCTAACTTCAATGGGCATAATCAATCTTGGTGT AGATCTGATGAAATTCCTCCCACCACAGAAGCTCAAAGCACATGGACTTATAGAAATAAT GAGATGAACTGTGCTGATAGAACTGTTCCGAGAACAGTACCTCAGCCCAATGATCACGAG GATTGCAGGGTTAGTGGCTTTGCTGAAGCAACTAATTTTAATGATCAAGCAGGAAGACAC CAAGGTTTTAGACCTTTCTCCTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGAT CATGCAGTAGCTGCTTCCAAGCATGCTGAGGTTAATAATAGTATGAAATCAAGAGATGTC AACCTCAATTCACGCCTGAACACAATATCCTTTCCTATTGCAACTGCAAACAATGAAACA TCGACTGCCCTTAATGACGTGAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGT TTCAGTAACAATGATGGTGCTGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAA ATTTCTAGCTCCCTCGGTGTAGCTGACAGATCATCTATTGCTGCCAGATCCTTCAATGCT GGTTATGTTTATGAAAATGGCGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACC ATGGTGTATCAAACAAGTTTGGCCATGCGTCCACTCTCTCCTGGCAAACAAAGCAGCGGC GTTGCTTCGAGAAGGACAGCCGCTGTGGTGTCCGAGCGGCATGGAGGCCAAGTTGTGAGA CACCCACGGACTGCTTCATCAGTTTACATGCCTGAGCAAGGTCCTGGATGGTTGTGAGCT CCACCAGCTAATCACCAAAGGCAGCTTATGCATCATGCAGCTGGATTGGAGAACTCCTAA AGCTGAAGGCCACGATGGGATTGGAGAACTCCTAAATCTTGTTCACACAGGGTACCTCAG TACTCTTCTTTTCAAACACAGGTAACGGAGACAAATTAGTTTGTATGAGATTGGGTAACG TCTGTTGAAATATGTGGTATTCTTAAAAGAAACGTTGTTGCACTGTGGTATTGAGTGGAG ATGAAAGAATCTTGTGGTATTATTTGGTTGGTCAAATCTTTGTGGTATAGTTGGAATTTT CATATAATAATATATTTTTCCTTGGTCAAATCTTCG