Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0484800-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:23956935:23960961:1 gene:Os08g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0484800-00)
Sequence

ATGGACAACTACCGGGGCGGTGGGCCGGGAGCCCAGGTAACAAGAACGGCCCGTGTCTGG
GTGTGGCTCCCTTCCAATCGCATCCGCGCGCTGCTCACCTTGTTCGTCCTCACCTCACCT
CACCTTTCCTCGCTCATGCCGCCCCCCGCTCCCCTCGCGCCGCTCCGCTCCCGCGCGCAC
CTCCGCCTCCATTGCCGCCTCCCTCCCTCGCCCTCGCCCTCGCCATCGCCTCTCCTCTCG
CGAGCTCCCTCTCGCAGATGGCCTCCGCCTCTCCGCGCCTCCGCCTCCGGTCGCGGGGGC
GCTTCCGCCGCCGCCGCGCCGACGAGCTCGGCGCTCGACGCGCTCCTCTCCGCCGCGGAG
CTGCTCTGCCTCGCGCCGCCCGCCATCTGCTCGGTGGTATGCGCGGCCCGCCTCGTCTTC
CCGCCGCCGACGACGACGGGCGCCCCCGCGTCGGGGCTCGTGGGCGGGAGGATGTTCGTC
GTGCAGTACGTGCTTCTGGTGGGCGCGGTGGCGATCGGGAGCCTGATCCGGCGGAGGCAG
TGGGGGCGGCTTTGCCAGGTGGGTGGCGGCGGCGGCGGTGGCGCCGCGGCTAGGGGTGTG
GATTTCGCGGGGAGGATTGGCGAGGTGGAGGAGAGCGTGAGGGGCGTGGTGGCGGCCGTC
GGTGTGCTGTCGAGGACCGTCGAGAAGCTCGGCGTCAGGTTTAGGGTGTTGCGGAGGACG
CTGAGGGATCCTATCAATGAGACTGCAACTTTAGCCCAAAAGAATTCTGAGGCTACTCGA
GTACTAGCTGCCCAAGAAGACCTTCTTGAAAAAGAACTTGGTGAAATTCAAAAGGTTTTA
TATGCAATGCAGGAACAACAACAGAAGCAACTTGAACTAATCCTTGCAATCGGGGAGGCA
AGCAGGATATTAGATGATAAAGAGGATTTGCCAGGCAACGATACTTCCAGCACGATTATG
GAGAAAGAGAATGAACAGACAGATATAAAAGTCGAAACAATTACAGGAGGCAATAACAGA
CCCTGA

Peptide Sequence

PEP ID

Os08t0484800-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:23956935:23960961:1 gene:Os08g0484800 transcript:Os08t0484800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0484800-00)
Sequence

MDNYRGGGPGAQVTRTARVWVWLPSNRIRALLTLFVLTSPHLSSLMPPPAPLAPLRSRAH
LRLHCRLPPSPSPSPSPLLSRAPSRRWPPPLRASASGRGGASAAAAPTSSALDALLSAAE
LLCLAPPAICSVVCAARLVFPPPTTTGAPASGLVGGRMFVVQYVLLVGAVAIGSLIRRRQ
WGRLCQVGGGGGGGAAARGVDFAGRIGEVEESVRGVVAAVGVLSRTVEKLGVRFRVLRRT
LRDPINETATLAQKNSEATRVLAAQEDLLEKELGEIQKVLYAMQEQQQKQLELILAIGEA
SRILDDKEDLPGNDTSSTIMEKENEQTDIKVETITGGNNRP

Transcript Sequence

Transcript ID

Os08t0484800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:23956935:23960961:1 gene:Os08g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0484800-00)
Sequence

ATGGACAACTACCGGGGCGGTGGGCCGGGAGCCCAGGTAACAAGAACGGCCCGTGTCTGG
GTGTGGCTCCCTTCCAATCGCATCCGCGCGCTGCTCACCTTGTTCGTCCTCACCTCACCT
CACCTTTCCTCGCTCATGCCGCCCCCCGCTCCCCTCGCGCCGCTCCGCTCCCGCGCGCAC
CTCCGCCTCCATTGCCGCCTCCCTCCCTCGCCCTCGCCCTCGCCATCGCCTCTCCTCTCG
CGAGCTCCCTCTCGCAGATGGCCTCCGCCTCTCCGCGCCTCCGCCTCCGGTCGCGGGGGC
GCTTCCGCCGCCGCCGCGCCGACGAGCTCGGCGCTCGACGCGCTCCTCTCCGCCGCGGAG
CTGCTCTGCCTCGCGCCGCCCGCCATCTGCTCGGTGGTATGCGCGGCCCGCCTCGTCTTC
CCGCCGCCGACGACGACGGGCGCCCCCGCGTCGGGGCTCGTGGGCGGGAGGATGTTCGTC
GTGCAGTACGTGCTTCTGGTGGGCGCGGTGGCGATCGGGAGCCTGATCCGGCGGAGGCAG
TGGGGGCGGCTTTGCCAGGTGGGTGGCGGCGGCGGCGGTGGCGCCGCGGCTAGGGGTGTG
GATTTCGCGGGGAGGATTGGCGAGGTGGAGGAGAGCGTGAGGGGCGTGGTGGCGGCCGTC
GGTGTGCTGTCGAGGACCGTCGAGAAGCTCGGCGTCAGGTTTAGGGTGTTGCGGAGGACG
CTGAGGGATCCTATCAATGAGACTGCAACTTTAGCCCAAAAGAATTCTGAGGCTACTCGA
GTACTAGCTGCCCAAGAAGACCTTCTTGAAAAAGAACTTGGTGAAATTCAAAAGGTTTTA
TATGCAATGCAGGAACAACAACAGAAGCAACTTGAACTAATCCTTGCAATCGGGGAGGCA
AGCAGGATATTAGATGATAAAGAGGATTTGCCAGGCAACGATACTTCCAGCACGATTATG
GAGAAAGAGAATGAACAGACAGATATAAAAGTCGAAACAATTACAGGAGGCAATAACAGA
CCCTGATTTCATGAACTAAAAACAGAAAGTAGGAACTTCAAAATCCTCTCCAACAAACCA
GGAGGTATCTTTTGGTTTTGTTCCATCCAATATTGGGTGGGAATGAATGGTTGAAGTGCC
AATGCGCCATCATGATGAATATATTCGTGGCTTCAAATGGGATCGTTGGTAACATTTCAA
TGTGCTGTTCATAAACACTGGCCAGAGCAACTGCGTCCTAACACTGTAACACATGACTTG
TACAGGGCAAGCTGGTGGGTTCCATAAGATTTCTGTATGGTACCTGCCTGGTAAAGAACG
AATTTCTCATTGGCTTGTAACTTCGTAAGCTGTAATTACATTGACCTTTTAAATGTGTTC
GACATGTACATGCCGGT