Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0484500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23934860:23938837:-1 gene:Os08g0484500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1). (Os08t0484500-01);Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 2. (Os08t0484500-02)
Sequence	ATGCCCCTCGCGCCATGCCCCTCGCCGCCCCTCCCCTCCTCCCCGTGGCCGGCGCGCGCC CCGCGCCGGGGCGGCCTCCTCCGCGCCCGCGCGGTGCGGGCGGCGCCCCGGCCGCCGAGC AAGTGGTCGCTGGGTAGCTGGCGCAGCCTGACGGCGCTGCAGCAGCCGGAGTACCCCGAC AAGGCGGAGCTGGATGAGGTGCTCCGGACGGTGGAGGCGTTCCCGCCGATTGTCTTCGCC GGCGAGGCGCGCAAGCTGGAGGAGCGGCTCGCGGAGGCCGCCGTCGGGCGCGCGTTCCTC CTCCAGGGCGGCGACTGCGCCGAGAGCTTCAAGGAGTTTAACGCGAACAACATCCGGGAC ACCTTCCGTGTGCTCCTCCAGATGTCCGTGGTGCTCATGTTTGGAGGCCAGATGCCTATC ATCAAGGTAGGAAGAATGGCAGGTCAGTTTGCAAAGCCAAGGTCAGATGGCTTTGAGGAG AGGGATGGAGTGAAGTTGCCAAGCTACAGAGGGGATAACATTAATGGGGATTCATTCGAT GAGAAATCAAGATTGCCAGATCCACACCGCATGATCAGGGCATACTCACAGTCTGCAGCA ACACTGAATTTGCTGCGGGCTTTTGCTACTGGAGGTTATGCTGCCATGCAGAGGGTAACA CAATGGAACCTTGACTTCACAGAGCATAGTGAACAGGGTGACAGGTACATGGAGCTGGCT CACCGAGTTGATGAGGCTTTGGGGTTCATGGCAGCTGCTGGTCTCACTATGGACCATCCT ATTATGACAACAACAGAATTCTGGACATCACATGAGTGCCTTCTTCTTCCCTATGAGCAA GCACTTACTCGCGAGGATTCCACATCTGGCCTCTATTACGACTGTTCTGCTCACTTCCTT TGGGTTGGAGAGCGTACACGTCAGCTTGATTGTGCCCATGTGGAGTTTCTCCGAGGAATT GCGAACCCTCTGGGTATCAAGGTCAGTGACAAGATGGACCCAAAAGAACTTGTGAAGTTG ATTGATATCTTGAATCCCCAGAACAAACCAGGGAGAATTACTATCATTACAAGAATGGGA CCTGAAAACATGAGAGTGAAACTCCCTCACCTAATACGTGCTGTCCGTGGTGCTGGCCAG ATAGTAACATGGGTTACTGATCCGATGCATGGTAACACAATGAAGGCTCCTTGTGGCCTC AAGACTCGCTCCTTTGATAGAATCTTGGCTGAGGTGCGCGCATTCTTTGATGTGCACGAA CAAGAAGGCAGCCACCCAGGAGGGGTGCATCTGGAGATGACTGGACAAAATGTGACAGAA TGCATCGGCGGGTCACGCACGGTGACATTCGACGATCTGGGCTCACGATACCACACACAC TGCGACCCGAGGCTCAACGCATCGCAGTCTCTGGAGTTGGCGTTCATCATCGCCGAGCGG CTCAGAAAGAGGAGGATCGCCTCATGGCAGTTGAACAAGAACAGTCATCTGGGCAACATC CCATCTTTGGGGCTCTGA

Peptide Sequence

PEP ID	Os08t0484500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23934860:23938837:-1 gene:Os08g0484500 transcript:Os08t0484500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1). (Os08t0484500-01);Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 2. (Os08t0484500-02)
Sequence	MPLAPCPSPPLPSSPWPARAPRRGGLLRARAVRAAPRPPSKWSLGSWRSLTALQQPEYPD KAELDEVLRTVEAFPPIVFAGEARKLEERLAEAAVGRAFLLQGGDCAESFKEFNANNIRD TFRVLLQMSVVLMFGGQMPIIKVGRMAGQFAKPRSDGFEERDGVKLPSYRGDNINGDSFD EKSRLPDPHRMIRAYSQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYMELA HRVDEALGFMAAAGLTMDHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHFL WVGERTRQLDCAHVEFLRGIANPLGIKVSDKMDPKELVKLIDILNPQNKPGRITIITRMG PENMRVKLPHLIRAVRGAGQIVTWVTDPMHGNTMKAPCGLKTRSFDRILAEVRAFFDVHE QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIIAER LRKRRIASWQLNKNSHLGNIPSLGL

Transcript Sequence

Transcript ID	Os08t0484500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23934860:23938837:-1 gene:Os08g0484500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1). (Os08t0484500-01);Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 2. (Os08t0484500-02)
Sequence	ACCCTCCATCGCTATTCCCCAAAATGCCCCTCGCGCCATGCCCCTCGCCGCCCCTCCCCT CCTCCCCGTGGCCGGCGCGCGCCCCGCGCCGGGGCGGCCTCCTCCGCGCCCGCGCGGTGC GGGCGGCGCCCCGGCCGCCGAGCAAGTGGTCGCTGGGTAGCTGGCGCAGCCTGACGGCGC TGCAGCAGCCGGAGTACCCCGACAAGGCGGAGCTGGATGAGGTGCTCCGGACGGTGGAGG CGTTCCCGCCGATTGTCTTCGCCGGCGAGGCGCGCAAGCTGGAGGAGCGGCTCGCGGAGG CCGCCGTCGGGCGCGCGTTCCTCCTCCAGGGCGGCGACTGCGCCGAGAGCTTCAAGGAGT TTAACGCGAACAACATCCGGGACACCTTCCGTGTGCTCCTCCAGATGTCCGTGGTGCTCA TGTTTGGAGGCCAGATGCCTATCATCAAGGTAGGAAGAATGGCAGGTCAGTTTGCAAAGC CAAGGTCAGATGGCTTTGAGGAGAGGGATGGAGTGAAGTTGCCAAGCTACAGAGGGGATA ACATTAATGGGGATTCATTCGATGAGAAATCAAGATTGCCAGATCCACACCGCATGATCA GGGCATACTCACAGTCTGCAGCAACACTGAATTTGCTGCGGGCTTTTGCTACTGGAGGTT ATGCTGCCATGCAGAGGGTAACACAATGGAACCTTGACTTCACAGAGCATAGTGAACAGG GTGACAGGTACATGGAGCTGGCTCACCGAGTTGATGAGGCTTTGGGGTTCATGGCAGCTG CTGGTCTCACTATGGACCATCCTATTATGACAACAACAGAATTCTGGACATCACATGAGT GCCTTCTTCTTCCCTATGAGCAAGCACTTACTCGCGAGGATTCCACATCTGGCCTCTATT ACGACTGTTCTGCTCACTTCCTTTGGGTTGGAGAGCGTACACGTCAGCTTGATTGTGCCC ATGTGGAGTTTCTCCGAGGAATTGCGAACCCTCTGGGTATCAAGGTCAGTGACAAGATGG ACCCAAAAGAACTTGTGAAGTTGATTGATATCTTGAATCCCCAGAACAAACCAGGGAGAA TTACTATCATTACAAGAATGGGACCTGAAAACATGAGAGTGAAACTCCCTCACCTAATAC GTGCTGTCCGTGGTGCTGGCCAGATAGTAACATGGGTTACTGATCCGATGCATGGTAACA CAATGAAGGCTCCTTGTGGCCTCAAGACTCGCTCCTTTGATAGAATCTTGGCTGAGGTGC GCGCATTCTTTGATGTGCACGAACAAGAAGGCAGCCACCCAGGAGGGGTGCATCTGGAGA TGACTGGACAAAATGTGACAGAATGCATCGGCGGGTCACGCACGGTGACATTCGACGATC TGGGCTCACGATACCACACACACTGCGACCCGAGGCTCAACGCATCGCAGTCTCTGGAGT TGGCGTTCATCATCGCCGAGCGGCTCAGAAAGAGGAGGATCGCCTCATGGCAGTTGAACA AGAACAGTCATCTGGGCAACATCCCATCTTTGGGGCTCTGAAAGTCATATATATACAGAA ACAGTGATAAGAAAAGATCAAATACCATAGGCAAGCTGTGAGCTATCCAATTGTCTTGTA CTAGCTGTTATGTCAAGTTGTCAAGTTTCGTTTCATGTTACTCATGTACTGCTAAACAAG TCACCCTCTTGATTTACCCTGTCATATATAAATAAGAAATGCAAGTTCACCTTAATCTCG GTTTG