Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0483900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23894602:23896537:-1 gene:Os08g0483900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 047 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0483900-01)
Sequence	ATGGCGTTGGAGGCGGTGGTGTTCTCGGAAGGATACTACTTCGGATGCGGCGGTGCCATG GCGGCGGAAGCAGCTGCAGGAGGAGCTTGGAGCTGGAGCCACGGGTATGGCGGTGGCGTT GATCAGGGGAAGGGGGCGATGGAGTTAGTGGTGGACGACGGGGTGGTGAACGCCTTCTGG GACGGCGGCGGAGGCGGCGCAAGCTCTTCCCCGGTGATGGCCGCCGTCTCGGGGTTTATT GAGGAGCCGGACGGCGGTAATTCCTCCGTCGCAGACGCAGCGCCGCCGCCGGAGCACGGA GGTGCGTCTGTCGTCGGACGGGATGGCTCCGCGGCGGCGCCGGCGGCGGCCGCAGGGAGG AGGAAGCGGCGGAGGGCGAGGACCGTCAAGAACAGGGAGGAGGTGGAGAGCCAGCGCATG ACCCACATCGCCGTCGAGCGCAACCGCCGGAAGCAGATGAACGAGTACCTCGCCGTGCTC CGCTCCCTCATGCCGGCCTCCTACGTGCAAAGGGGCGACCAGGCGTCCATAATTGGCGGA GCAATCAACTACGTCAAGGAGATGGAGCAGCTTCTCCAATCCCTGGAGGCGCACAGACAC GCCCGCCGCGCACGCACCGACGCCGCCGCCGCGTTGCCATTCGCGGGCTTCTTCACGTTC CCGCAGTACTCCATGAGCGCCGTGCCCACGACAACCACCACCACTGTAGCAGCAGCAGCA ACGGAAAACGGCAATGCCGTCGCCGGCGCCGGCGCGGGCGACGACGCGGACGCGGACGTG TCGGGGTCGAAGCCGTCCTCGGTGGCGGACATCGAGGTGACGATGGTGGAGAGCCACGCC AACCTGAAGGTGCTGTCGCGGCGGCGGCCGAGGCAGCTGCTGAGGATGGTGGCAGGGCTG CAACACCACCGCCTCGCCGTGCTCCACCTCAACGTCGCCAGCGCCGGCCACATGGCTCTC TACTCCCTTAGCCTTAAGGTGGAAGAAGACTGCCAGCTCACGTCGGTGGACGACATCGCG GCGGCGGTACACGGGATCGTCGAGACGATCGAGCAAGAGCAGCAGCAGCAGCAGAAGCAG AGCTGTAGCTAG

Peptide Sequence

PEP ID	Os08t0483900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23894602:23896537:-1 gene:Os08g0483900 transcript:Os08t0483900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 047 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0483900-01)
Sequence	MALEAVVFSEGYYFGCGGAMAAEAAAGGAWSWSHGYGGGVDQGKGAMELVVDDGVVNAFW DGGGGGASSSPVMAAVSGFIEEPDGGNSSVADAAPPPEHGGASVVGRDGSAAAPAAAAGR RKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGG AINYVKEMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAAA TENGNAVAGAGAGDDADADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGL QHHRLAVLHLNVASAGHMALYSLSLKVEEDCQLTSVDDIAAAVHGIVETIEQEQQQQQKQ SCS

Transcript Sequence

Transcript ID	Os08t0483900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23894602:23896537:-1 gene:Os08g0483900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 047 description:Helix-loop-helix DNA-binding domain containing protein. (Os08t0483900-01)
Sequence	ATCATCGGAGCTCGGTCTGCCCATGGAGATGACCTAGCTAGCTAGCTAGCTAGCTATAGC CTCTCTCTAGACATCTCTCTCTTGTGTGTGGGTGGTTTGGTTTCTTGATTGGAGCATGGC GTTGGAGGCGGTGGTGTTCTCGGAAGGATACTACTTCGGATGCGGCGGTGCCATGGCGGC GGAAGCAGCTGCAGGAGGAGCTTGGAGCTGGAGCCACGGGTATGGCGGTGGCGTTGATCA GGGGAAGGGGGCGATGGAGTTAGTGGTGGACGACGGGGTGGTGAACGCCTTCTGGGACGG CGGCGGAGGCGGCGCAAGCTCTTCCCCGGTGATGGCCGCCGTCTCGGGGTTTATTGAGGA GCCGGACGGCGGTAATTCCTCCGTCGCAGACGCAGCGCCGCCGCCGGAGCACGGAGGTGC GTCTGTCGTCGGACGGGATGGCTCCGCGGCGGCGCCGGCGGCGGCCGCAGGGAGGAGGAA GCGGCGGAGGGCGAGGACCGTCAAGAACAGGGAGGAGGTGGAGAGCCAGCGCATGACCCA CATCGCCGTCGAGCGCAACCGCCGGAAGCAGATGAACGAGTACCTCGCCGTGCTCCGCTC CCTCATGCCGGCCTCCTACGTGCAAAGGGGCGACCAGGCGTCCATAATTGGCGGAGCAAT CAACTACGTCAAGGAGATGGAGCAGCTTCTCCAATCCCTGGAGGCGCACAGACACGCCCG CCGCGCACGCACCGACGCCGCCGCCGCGTTGCCATTCGCGGGCTTCTTCACGTTCCCGCA GTACTCCATGAGCGCCGTGCCCACGACAACCACCACCACTGTAGCAGCAGCAGCAACGGA AAACGGCAATGCCGTCGCCGGCGCCGGCGCGGGCGACGACGCGGACGCGGACGTGTCGGG GTCGAAGCCGTCCTCGGTGGCGGACATCGAGGTGACGATGGTGGAGAGCCACGCCAACCT GAAGGTGCTGTCGCGGCGGCGGCCGAGGCAGCTGCTGAGGATGGTGGCAGGGCTGCAACA CCACCGCCTCGCCGTGCTCCACCTCAACGTCGCCAGCGCCGGCCACATGGCTCTCTACTC CCTTAGCCTTAAGGTGGAAGAAGACTGCCAGCTCACGTCGGTGGACGACATCGCGGCGGC GGTACACGGGATCGTCGAGACGATCGAGCAAGAGCAGCAGCAGCAGCAGAAGCAGAGCTG TAGCTAGATCAGCTAGAGTATTTTCTTAGAACATTTAGCAATGGCAAAAATGGTCAATAT TAATATGCGCCAACCGTGTGTAATGTGTGCACTTTCGATTCTTCTAGAACTCTGTACGCT GGATGCACATGTACCGCAGTTACTACACCCACGTACATTTCTGTAGTTCATCTTCACTTC AATTAATGCATCATGGTCTACCACTCTGTACTT