Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0483100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:23869863:23871110:-1 gene:Os08g0483100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0483100-01)
Sequence

ATGCCGCGGCGGACGGCGAGCAGCGCGGCCGCGGCGCCCGGCCGCGGCGGGATGGAGTGG
GAGCTGGAGCGGGAGATGGTGCTGATGGCGGCGGCCGGCGGCGAACACCAGAAGAAGCAG
AGGCAGCAGCAGCCGGCGCGGCGGGCGTTCGCCACCGACCTGCTCCAGAACTGCGACCTG
CCTCCTCCCGCGAAGCTCTTCGGCCCGCTCCCCACTCTGCAAAGGTTGGAGAACGCGGCG
GCGTGGACGAGCACGAGCCCGGATCGGAAGGGCGGGGACGGCGAAGGCGGTGGTGGTGAC
GGCGGCGACCGCCTGATGCGTGCGCTGCGGCTGTCGCAGTCGCGGGCGCGGGAGGCGGAG
GAGAAGCTGGCGGCCGCCGGGGCGAGCAACGGCGAGCTCTCGGCGCTGCTGGTGCGGGAC
TCGGTGGTGCTGTCGGCGCACCGCCGGTGGGTCATGATGCTGGAGGCCGAGAACTCCGGG
CTCAGAGGAGCAGCAGGAGCCGCCGGCTCGGCCAAGGAAGGCGTCGGCGAGGACGAGGAC
GAGGACGACGACGGCGGCGCCCGGCGCGGGGCCGCTGCGTGGTGGCTCGCGCTCGCCGTC
TGCGTCGGCATTGCCGGCATCGGCCTCGCCATGGGCAAGCTCCTCTGA

Peptide Sequence

PEP ID

Os08t0483100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:23869863:23871110:-1 gene:Os08g0483100 transcript:Os08t0483100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0483100-01)
Sequence

MPRRTASSAAAAPGRGGMEWELEREMVLMAAAGGEHQKKQRQQQPARRAFATDLLQNCDL
PPPAKLFGPLPTLQRLENAAAWTSTSPDRKGGDGEGGGGDGGDRLMRALRLSQSRAREAE
EKLAAAGASNGELSALLVRDSVVLSAHRRWVMMLEAENSGLRGAAGAAGSAKEGVGEDED
EDDDGGARRGAAAWWLALAVCVGIAGIGLAMGKLL

Transcript Sequence

Transcript ID

Os08t0483100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:23869863:23871110:-1 gene:Os08g0483100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0483100-01)
Sequence

GCGGTTTCTTCCCTTCCTCGCGGAAGAAGCCCACCGTTCCTTCCGCCACGCTTCAAGCAA
CCGCTCACCTCCCCTCCCCTCCCCTCCCCTCCCCCACCACTCTCACCAACCACACCCCCC
CAAACCAGGCGCCTTCTGGTGCTCTGACGCGCGTGGATGCCGCGGCGGACGGCGAGCAGC
GCGGCCGCGGCGCCCGGCCGCGGCGGGATGGAGTGGGAGCTGGAGCGGGAGATGGTGCTG
ATGGCGGCGGCCGGCGGCGAACACCAGAAGAAGCAGAGGCAGCAGCAGCCGGCGCGGCGG
GCGTTCGCCACCGACCTGCTCCAGAACTGCGACCTGCCTCCTCCCGCGAAGCTCTTCGGC
CCGCTCCCCACTCTGCAAAGGTTGGAGAACGCGGCGGCGTGGACGAGCACGAGCCCGGAT
CGGAAGGGCGGGGACGGCGAAGGCGGTGGTGGTGACGGCGGCGACCGCCTGATGCGTGCG
CTGCGGCTGTCGCAGTCGCGGGCGCGGGAGGCGGAGGAGAAGCTGGCGGCCGCCGGGGCG
AGCAACGGCGAGCTCTCGGCGCTGCTGGTGCGGGACTCGGTGGTGCTGTCGGCGCACCGC
CGGTGGGTCATGATGCTGGAGGCCGAGAACTCCGGGCTCAGAGGAGCAGCAGGAGCCGCC
GGCTCGGCCAAGGAAGGCGTCGGCGAGGACGAGGACGAGGACGACGACGGCGGCGCCCGG
CGCGGGGCCGCTGCGTGGTGGCTCGCGCTCGCCGTCTGCGTCGGCATTGCCGGCATCGGC
CTCGCCATGGGCAAGCTCCTCTGAAAACTAACCGTTTCTTCACCTTTTTGTTAAGGGGAA
ACTGCACATTGGAGGATCAGATCAGACATCATGAAAATCCATCGTTCTACGAAAAAATTC
TGCACAAAAAAAAATGTTGCTAGCATCTGGAACATTTCGATGATTAGGAATCACTTGTAA
ATGATGAACATGATGAACAGAGAGGGGTGATGACTGATGAGAACTGTAGAAACTTAGGAA
TCACTGTTTTCAGAAGGAAGTTGGGTTGTGACTGGTTTGGTTGTGAAGTTTGTGTAGATA
GGATTATCATCACGCAAAATTGGCATCATTTCTATTCCC