Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0481200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23793741:23796449:-1 gene:Os08g0481200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 14, U-box protein 14 description:Similar to Arm repeat containing protein. (Os08t0481200-01)
Sequence	ATGCCGCCACCGACGATGATGCTGCCGCCGTCGCCGGGCGACTCCGACCCGTCGGGGTCT CGCGACATGGACGACGAGGACCTCGTCGAGGATCTCCTCGTCACCGTCAACTCGGCGCGG GCCTTCGTCGAGTTCCGCCGCACGCAGCGCAAGGAGTGCGCCAACCTCCTCCGCTGGCTG GAGCTCGTCCTCCCGCTCCTCGAGGAGCTCCGCGACTCGGCGCCGCCGCTCACCGAGGAC GCCTACCACCGCCTCGCCCTGCTCGGACGCGCCTTCTCCGCCGCGCGCCGCCTCCTCCGG TCGTGCCACGACGGCAGCAAGATCTACCTGGCGCTGGAGAGCGAGGCGGTGCAGGGGAGA TTCCGCGCCGTGTACGAGAAGATGAACTCCGCTCTCGACGGGATGCCCTACTCGGAGCTC GCCATCTCCGATGAAGTCAAGGAGCAGGTGGAGCTGATGAACGCTCAGCTGACGCGATGT AAGAAGCGGGCGGACACGCAGGACATCGAGCTGTCCATGGATCTGATGGTGATCCTCGAC AACAAGGAGGGGGAGAGGAACGCGGACAGGGCGATCCTGGAGAGGCTGGCCAAGAAGCTG GAGCTGCAGACGCTGGCGGACCTGAGGGCGGAGACGATGGCCATCAAGAAGCTCATCAGC GAGAGGAACGGGCAGAGCGGCGATAGCACCAAGCAGATCATCGAGCTCCTCAACAAGTTC AAGGAGGTCGCCGGCGTCGACGAGAAGAACGTCCTCGGCGAGGTCTCCGTGACGAAATCC CTCGACAAGTGCCCCTCGTTGATGATCCCCAACGACTTCCTCTGCCCGATCACGCTCGCC ATCATGAGGGATCCTGTCATCGTTGCCACTGGACAGACGTACGAGAGGAGGAGCATCCAG AAATGGCTGGACAGCGGGGAGAGGACGTGCCCGAAGACGCGGCAGCGGCTGTCGCACATG TCGCTGGCGCCCAACTACGCGCTCAAGAACCTGATCCTGGAATGGTGCGACAAGAACAAG GTGGAGCTGCAGAAGAGGGAGCCGGAGCCCGTGGCGGAGCAGGACGACGAGCATCAGCGC GGCGCCGAGGACATCCCGTCGCTGGTGGAAGGCATGTCGTCGATCCACCTCGACGTGCAG CGGAAGGCTGTGAAGAGGATCCGGATGCTGTCCAAGGAGTGCCCGGAGAACAGGACGCTC ATCGCCGACAGCGGCGGCATCCCGGCGCTCATCGGGCTCCTCGCCTGCCCGGACAAGAAG GTGCAGGAGAACACGGTCACGTCGCTGCTGAACCTGTCCATCGACGAGAGCAACAAGCGC CACATCACCAAGGGGGGAGCACTCCCGCTCATCATCGAGATCCTCCGCAACGGCAGCGCG GAGGCGCAGGAGAACTCCGCCGCGACGCTGTTCAGCCTGTCCATGATCGACGAGAACAAG CTCACCATCGGGAGGCTGGGCGGCATCGCGCCGCTCGTCGAGCTCCTCCAGAACGGCAGC ATCAGGGGGAAGAAGGACGCCGCCACGGCCATCTTCAACCTGGTGCTCAACCAGCAGAAC AAGGTGAGGGCCACCCAGGCCGGCATCGTGCCGGCGCTTCTCAAGATCATCGACGACAAG GCGCTCAACATGGTGGACGAGGCGCTGTCCATCTTCCTCCTGCTCTCCTCCAACGCCGCC TGCTGCGGCGAGATCGGGACGACGCCGTTCATCGAGAAGCTCGTGCGTCTCATCAAGGAC GGCACGCCCAAGAACAAGGAGTGCGCGCTGTCCGTGCTGCTGGAGCTGGGGTCCAAGAAC AAGCCGCTGCTGGTGCACGCGCTCAGGTTCGGACTCCATGAGGATCTCTCCAAGATCGCC AAGAACGGCACCAGTAGAGCGCAGAGGAAGGCGACCTCTCTCATTCAGCTGGCGCGCAAG TGCTACTGA

Peptide Sequence

PEP ID	Os08t0481200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23793741:23796449:-1 gene:Os08g0481200 transcript:Os08t0481200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 14, U-box protein 14 description:Similar to Arm repeat containing protein. (Os08t0481200-01)
Sequence	MPPPTMMLPPSPGDSDPSGSRDMDDEDLVEDLLVTVNSARAFVEFRRTQRKECANLLRWL ELVLPLLEELRDSAPPLTEDAYHRLALLGRAFSAARRLLRSCHDGSKIYLALESEAVQGR FRAVYEKMNSALDGMPYSELAISDEVKEQVELMNAQLTRCKKRADTQDIELSMDLMVILD NKEGERNADRAILERLAKKLELQTLADLRAETMAIKKLISERNGQSGDSTKQIIELLNKF KEVAGVDEKNVLGEVSVTKSLDKCPSLMIPNDFLCPITLAIMRDPVIVATGQTYERRSIQ KWLDSGERTCPKTRQRLSHMSLAPNYALKNLILEWCDKNKVELQKREPEPVAEQDDEHQR GAEDIPSLVEGMSSIHLDVQRKAVKRIRMLSKECPENRTLIADSGGIPALIGLLACPDKK VQENTVTSLLNLSIDESNKRHITKGGALPLIIEILRNGSAEAQENSAATLFSLSMIDENK LTIGRLGGIAPLVELLQNGSIRGKKDAATAIFNLVLNQQNKVRATQAGIVPALLKIIDDK ALNMVDEALSIFLLLSSNAACCGEIGTTPFIEKLVRLIKDGTPKNKECALSVLLELGSKN KPLLVHALRFGLHEDLSKIAKNGTSRAQRKATSLIQLARKCY

Transcript Sequence

Transcript ID	Os08t0481200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23793741:23796449:-1 gene:Os08g0481200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 14, U-box protein 14 description:Similar to Arm repeat containing protein. (Os08t0481200-01)
Sequence	CTCGAATTTTCTTTCCCCCCGTCTCTCATGCGCCATTGATCGGATCGCTTGATGCCGCAT GCCGCCACCGACGATGATGCTGCCGCCGTCGCCGGGCGACTCCGACCCGTCGGGGTCTCG CGACATGGACGACGAGGACCTCGTCGAGGATCTCCTCGTCACCGTCAACTCGGCGCGGGC CTTCGTCGAGTTCCGCCGCACGCAGCGCAAGGAGTGCGCCAACCTCCTCCGCTGGCTGGA GCTCGTCCTCCCGCTCCTCGAGGAGCTCCGCGACTCGGCGCCGCCGCTCACCGAGGACGC CTACCACCGCCTCGCCCTGCTCGGACGCGCCTTCTCCGCCGCGCGCCGCCTCCTCCGGTC GTGCCACGACGGCAGCAAGATCTACCTGGCGCTGGAGAGCGAGGCGGTGCAGGGGAGATT CCGCGCCGTGTACGAGAAGATGAACTCCGCTCTCGACGGGATGCCCTACTCGGAGCTCGC CATCTCCGATGAAGTCAAGGAGCAGGTGGAGCTGATGAACGCTCAGCTGACGCGATGTAA GAAGCGGGCGGACACGCAGGACATCGAGCTGTCCATGGATCTGATGGTGATCCTCGACAA CAAGGAGGGGGAGAGGAACGCGGACAGGGCGATCCTGGAGAGGCTGGCCAAGAAGCTGGA GCTGCAGACGCTGGCGGACCTGAGGGCGGAGACGATGGCCATCAAGAAGCTCATCAGCGA GAGGAACGGGCAGAGCGGCGATAGCACCAAGCAGATCATCGAGCTCCTCAACAAGTTCAA GGAGGTCGCCGGCGTCGACGAGAAGAACGTCCTCGGCGAGGTCTCCGTGACGAAATCCCT CGACAAGTGCCCCTCGTTGATGATCCCCAACGACTTCCTCTGCCCGATCACGCTCGCCAT CATGAGGGATCCTGTCATCGTTGCCACTGGACAGACGTACGAGAGGAGGAGCATCCAGAA ATGGCTGGACAGCGGGGAGAGGACGTGCCCGAAGACGCGGCAGCGGCTGTCGCACATGTC GCTGGCGCCCAACTACGCGCTCAAGAACCTGATCCTGGAATGGTGCGACAAGAACAAGGT GGAGCTGCAGAAGAGGGAGCCGGAGCCCGTGGCGGAGCAGGACGACGAGCATCAGCGCGG CGCCGAGGACATCCCGTCGCTGGTGGAAGGCATGTCGTCGATCCACCTCGACGTGCAGCG GAAGGCTGTGAAGAGGATCCGGATGCTGTCCAAGGAGTGCCCGGAGAACAGGACGCTCAT CGCCGACAGCGGCGGCATCCCGGCGCTCATCGGGCTCCTCGCCTGCCCGGACAAGAAGGT GCAGGAGAACACGGTCACGTCGCTGCTGAACCTGTCCATCGACGAGAGCAACAAGCGCCA CATCACCAAGGGGGGAGCACTCCCGCTCATCATCGAGATCCTCCGCAACGGCAGCGCGGA GGCGCAGGAGAACTCCGCCGCGACGCTGTTCAGCCTGTCCATGATCGACGAGAACAAGCT CACCATCGGGAGGCTGGGCGGCATCGCGCCGCTCGTCGAGCTCCTCCAGAACGGCAGCAT CAGGGGGAAGAAGGACGCCGCCACGGCCATCTTCAACCTGGTGCTCAACCAGCAGAACAA GGTGAGGGCCACCCAGGCCGGCATCGTGCCGGCGCTTCTCAAGATCATCGACGACAAGGC GCTCAACATGGTGGACGAGGCGCTGTCCATCTTCCTCCTGCTCTCCTCCAACGCCGCCTG CTGCGGCGAGATCGGGACGACGCCGTTCATCGAGAAGCTCGTGCGTCTCATCAAGGACGG CACGCCCAAGAACAAGGAGTGCGCGCTGTCCGTGCTGCTGGAGCTGGGGTCCAAGAACAA GCCGCTGCTGGTGCACGCGCTCAGGTTCGGACTCCATGAGGATCTCTCCAAGATCGCCAA GAACGGCACCAGTAGAGCGCAGAGGAAGGCGACCTCTCTCATTCAGCTGGCGCGCAAGTG CTACTGAAGATGAGGACCCCGTTTGTAATTGTAACTCATTTTCTTTCCCCCTCTTTCTCA GTAGAAAAAATTCTGTTGCTTGCCCTGTTCTAGCTGAATGCATATGTGGTGTATCGCCAG AATGGGGAATTGGTGGTGGAATTGCTGAAAAAAAACACCCTAAATGTATTTGTGCCGATT TCAGTCAAACTAGTTGATATTCCTATACCATTATAAGCTGAGTTAGATTTTAATGCTAGG ATATACGATATTAGTTTATACAAGATCG