Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0481000-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:23755951:23763739:-1 gene:Os08g0481000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0481000-01);Pentatricopeptide repeat domain containing protein. (Os08t0481000-02);Hypothetical conserved gene. (Os08t0481000-03)
Sequence	ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAAC CAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGAC GCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCG GGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATC TCCTGGAACTCCATCATCGCCGGATGCCTCGCCCACGGCGACCTCGCGGCCGCCTCCGCC TACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTC GTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAAC GTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCG CGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGT GGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAG AAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAG AACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATT ATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATG CTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCT TCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTA GAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTT GACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACA ATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAG ATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGT GGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATAT GCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGA CAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTT TGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCT GCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAAC ATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAA AAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATG TTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAA ATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAA GAATGTGGTTAG

Peptide Sequence

PEP ID	Os08t0481000-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:23755951:23763739:-1 gene:Os08g0481000 transcript:Os08t0481000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0481000-01);Pentatricopeptide repeat domain containing protein. (Os08t0481000-02);Hypothetical conserved gene. (Os08t0481000-03)
Sequence	MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRA GRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGL VRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMIS GYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAI ISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAML ESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHE MELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAG QLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSN IYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRK ISFHMQMVTDKTQMMEELVQECG

Transcript Sequence

Transcript ID	Os08t0481000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23755951:23763739:-1 gene:Os08g0481000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0481000-01);Pentatricopeptide repeat domain containing protein. (Os08t0481000-02);Hypothetical conserved gene. (Os08t0481000-03)
Sequence	AATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAA CCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGA CGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGC GGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCAT CTCCTGGAACTCCATCATCGCCGGATGCCTCGCCCACGGCGACCTCGCGGCCGCCTCCGC CTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCT CGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAA CGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGC GCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAG TGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGA GAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCA GAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCAT TATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAAT GCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTC TTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTT AGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGT TGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACAC AATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGA GATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTG TGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATA TGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGG ACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGT TTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGC TGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAA CATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGA AAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATAT GTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAA AATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCA AGAATGTGGTTAGTGCTTTTTATATCATCCAAATTCTCGTGCGAGTTTAGTAAGCTCTGC TGTACTCAGAATCTCCAGCTTTGTGCTCTAGGATCAAATTTCTATGAATAGATTATTCAT ATGAGATACATGAATTCCCAGAATGGATTTTAATCAAACGAGTACAGTGGATGTTGCTTT GATGACAAAGATATATCTCTTTGCAAAAGGAGGGTTGAAACTAGACATGAGAAGGAGCAT ATTTTGGAGCGCAGGATTCCTGATATCCTCCAACTGGGTTCTTTCGTGGTCATAATACAC CTCATTTCCCTTGGTATCTCTGGGTGATGCTTCTGCTGAGGTTTTGGTCGACTCTGAACT GAACATAGCATCAATCATATCCTTTAATTCTCCAATACTACTTTGTGCCGCAGACTCGCT TACCTTGAGGGACTCATAGTCTTGTATGATGCTCTGTAAGCTTGTTCAATTTCTCCTGCA TCTCTGATGCCTCGGTGATTGAATTGGAGGCTTTGTCACCATTGGAAGTTGATCTGACGC TGTCAACAAAAACATTGTTCATGTTGATTCATGGATTGGTGGAAATCATCAAAACAGTAA ATCTAAAAACAAGGAATTAAACAGAAATTCCACTCAATGAAAACCGAGATGTCAAAAACT CACAAAATGATTCCAGAACTTGAAAAAGAAAAGTTGGGAATAGACAATTACTCTACCTGG ACCTGAAGGAGAACATCTTGTCCATTCAAGAACCCTGCAGCCAGCCCAGAATTAGCCGAC CATGCCACCTGCGTTCCTCCAAAGTCGTATACTATGAAACCCAAAATTCTATCAGTAAGA TAGAGAAACAGAGAATACGGTGTTACTCTGAAATGGTGGTGTCCGCATACCGGAGGCTAC GGTTGCTCCTGGGTATAGAAGTAGAGATCATACCGCGTCTTTCGCGTTGCCAGAGGAAGG AGAAGATGAAAAGGCTTATTGAAGAAGGCAAGGAATTGAAACCGTCCAAACCTCGAGAGC CGCCTTGAAGGTTGAGTTGTGCTTCTCTGTCCTGACCATCGACATCAGCTGGCCCCAGCA GTCAGCCAAAGACGCCAGTTCCTCTAGGTATGTTTCCTTGTATATATCATCATCATATAT TGACTACCTGCCTCTC