Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0480100-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:23717855:23722181:-1 gene:Os08g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle receptor, alpha subunit, N-terminal domain containing protein. (Os08t0480100-01);Similar to predicted protein. (Os08t0480100-02)
Sequence	ATGTTGGAGGAGCTGCTCATCTTCACGCGCGGCGGCCTCATCCTCTGGTCGTCATGCCGG GCGCTCGGCGGCGCCGCCCTCAAGGGCTCGCCCATCGACGCCAGCTTCTCCCAGGACACC TATGCGCTTAAGTGGACCTTTAACAATGACCTCGGCCTCGTGTTCGTCGCCGTTTACCAG CGCATGCTCCACCTCCTTTACGTCGACGACCTCCTCGCCGCCGTCCGTAAGGAGTTCTCA CAGATTTATGATCCCAAGCGCACCTCCTATGATGACGCCTTCAATGAGGTTTTTCGCCAG CTCCACCTCGAGGCTGAGGCTCGCAGTGAGGAGATGAAGAAGAATAAACAGGTCACTGGT TCCCGGCCCACCAAGGTTACCACTAAGACCAATCGTGGCGACACTCAGGGCTCTGGTGGT GGTAGGAAGAAAGGTGACTCGGGGAAGGACGACTCTGATGGTGACTCCGGGAAGGAGCAC ACTTTGCCAAATGGTAATTCCAAGATGCAAGAGAATAGCCTCAAGGACAATTCTCATGCC CGCAGTGTTGTTGTTAAAGGAAAGGAGAACGGAGACCCCAACGATGGGGCCTTTGATGTA AATAAGTTACAGAAGATGAGAAACAAGGGTAACAAGAAGAATGAGGTTGCTAGTAATGTG GCCAAGAACACCTCTAAGGCTAACACAAAGAAGAATTTGAAGAAAAATAGGGTTTGGGAT GACACACCTGATGACAAGAAGAAGCTGGATTTCACAGACCCAGCTGATGAGAGAGGGGAT GAGGTGATAGACCAGGTGGTTGTCAAGCAGGGGGAAAGCATGATGGATAAGGATGATGTC GTGAGCAGTGATAGTGATGAAGAAGAGGAAGATGGAGAGGAAAATTCTGGAGCTTCCCAA AAGAAGAAAGGATGGTTCTCCTCGATGTTCAAGAGCATTGCAGGTAACAATGTGCTTGAG AAGTCTGACATCCAACCTGCACTCAAAGCGCTTAAAGATAGGCTGATGACTAAGAATGTG GCTGAAGAAATTGCAGAGAAACTTTGTGAATCAGTGGCAGCTAGCCTTGAGGGCAAAAAG CTGGGATCCTTCACAAGGATATCCTCTACTGTTCAGACAGCTATGGAGGAGGCTCTTCTT CGCATCTTAACCCCAAGGCGATCTATTGACATATTAAGGGATGTACATGCTGCCAAAGAG CGTGGGAAGCCATATGTTATTGTTTTTGTTGGAGTGAATGGAGTTGGCAAATCTACCAAT CTTGCAAAGGTTGCTTATTGGCTTCTTCAGCATAACCTCAGTGTAAGCCTGGCAGCATGT GACACCTTTAGATCTGGTGCTGTTGAGCAACTGCGTACTCATGCTCGCAGGCTTCAGATA CCTATATTTGAGAAGGGATATGAAAAAGATCCAGCGGTTGTCGCAAAGGAGGCTATTCAG GAAGCTACTCGTAATAAGTCAGATGTTGTTCTTGTCGACACTGCTGGACGTATGCAGGAT AATGAGCCACTCATGAGAGCACTCTCCAAGCTCATCAATCTCAATAGCCCAGATCTAGTT TTATTTGTTGGGGAAGCATTGGTTGGTAATGATGCTGTTGATCAACTCACTAAATTTAAC CAGAAATTAGCAGACCTTTCCGCTGTCCCTACTACCAGATTGATAGATGGCATCCTGCTC ACCAAGTTTGACACCATCGACGACAAGGTTGGAGCTGCACTTTCAATGGTTTATATATCT GGAGCTCCAGTCATGTTCGTTGGCTGTGGTCAGTCTTACACTGACCTCAAGAAGCTCAAT GTCAAATCCATCGTTAAAACCCTGCTGAAGTGA

Peptide Sequence

PEP ID	Os08t0480100-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:23717855:23722181:-1 gene:Os08g0480100 transcript:Os08t0480100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle receptor, alpha subunit, N-terminal domain containing protein. (Os08t0480100-01);Similar to predicted protein. (Os08t0480100-02)
Sequence	MLEELLIFTRGGLILWSSCRALGGAALKGSPIDASFSQDTYALKWTFNNDLGLVFVAVYQ RMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVFRQLHLEAEARSEEMKKNKQVTG SRPTKVTTKTNRGDTQGSGGGRKKGDSGKDDSDGDSGKEHTLPNGNSKMQENSLKDNSHA RSVVVKGKENGDPNDGAFDVNKLQKMRNKGNKKNEVASNVAKNTSKANTKKNLKKNRVWD DTPDDKKKLDFTDPADERGDEVIDQVVVKQGESMMDKDDVVSSDSDEEEEDGEENSGASQ KKKGWFSSMFKSIAGNNVLEKSDIQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK LGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTN LAKVAYWLLQHNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQ EATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFN QKLADLSAVPTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLN VKSIVKTLLK

Transcript Sequence

Transcript ID	Os08t0480100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23717855:23722181:-1 gene:Os08g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle receptor, alpha subunit, N-terminal domain containing protein. (Os08t0480100-01);Similar to predicted protein. (Os08t0480100-02)
Sequence	AGAGAATTTATTTTTTTTTTTCAGTTTTTTCCCCCACCCACACCACAAGCAGACGAAGAA GAAGAACAAGGTTCGTCCGTCGAGATGTTGGAGGAGCTGCTCATCTTCACGCGCGGCGGC CTCATCCTCTGGTCGTCATGCCGGGCGCTCGGCGGCGCCGCCCTCAAGGGCTCGCCCATC GACGCCAGCTTCTCCCAGGACACCTATGCGCTTAAGTGGACCTTTAACAATGACCTCGGC CTCGTGTTCGTCGCCGTTTACCAGCGCATGCTCCACCTCCTTTACGTCGACGACCTCCTC GCCGCCGTCCGTAAGGAGTTCTCACAGATTTATGATCCCAAGCGCACCTCCTATGATGAC GCCTTCAATGAGGTTTTTCGCCAGCTCCACCTCGAGGCTGAGGCTCGCAGTGAGGAGATG AAGAAGAATAAACAGGTCACTGGTTCCCGGCCCACCAAGGTTACCACTAAGACCAATCGT GGCGACACTCAGGGCTCTGGTGGTGGTAGGAAGAAAGGTGACTCGGGGAAGGACGACTCT GATGGTGACTCCGGGAAGGAGCACACTTTGCCAAATGGTAATTCCAAGATGCAAGAGAAT AGCCTCAAGGACAATTCTCATGCCCGCAGTGTTGTTGTTAAAGGAAAGGAGAACGGAGAC CCCAACGATGGGGCCTTTGATGTAAATAAGTTACAGAAGATGAGAAACAAGGGTAACAAG AAGAATGAGGTTGCTAGTAATGTGGCCAAGAACACCTCTAAGGCTAACACAAAGAAGAAT TTGAAGAAAAATAGGGTTTGGGATGACACACCTGATGACAAGAAGAAGCTGGATTTCACA GACCCAGCTGATGAGAGAGGGGATGAGGTGATAGACCAGGTGGTTGTCAAGCAGGGGGAA AGCATGATGGATAAGGATGATGTCGTGAGCAGTGATAGTGATGAAGAAGAGGAAGATGGA GAGGAAAATTCTGGAGCTTCCCAAAAGAAGAAAGGATGGTTCTCCTCGATGTTCAAGAGC ATTGCAGGTAACAATGTGCTTGAGAAGTCTGACATCCAACCTGCACTCAAAGCGCTTAAA GATAGGCTGATGACTAAGAATGTGGCTGAAGAAATTGCAGAGAAACTTTGTGAATCAGTG GCAGCTAGCCTTGAGGGCAAAAAGCTGGGATCCTTCACAAGGATATCCTCTACTGTTCAG ACAGCTATGGAGGAGGCTCTTCTTCGCATCTTAACCCCAAGGCGATCTATTGACATATTA AGGGATGTACATGCTGCCAAAGAGCGTGGGAAGCCATATGTTATTGTTTTTGTTGGAGTG AATGGAGTTGGCAAATCTACCAATCTTGCAAAGGTTGCTTATTGGCTTCTTCAGCATAAC CTCAGTGTAAGCCTGGCAGCATGTGACACCTTTAGATCTGGTGCTGTTGAGCAACTGCGT ACTCATGCTCGCAGGCTTCAGATACCTATATTTGAGAAGGGATATGAAAAAGATCCAGCG GTTGTCGCAAAGGAGGCTATTCAGGAAGCTACTCGTAATAAGTCAGATGTTGTTCTTGTC GACACTGCTGGACGTATGCAGGATAATGAGCCACTCATGAGAGCACTCTCCAAGCTCATC AATCTCAATAGCCCAGATCTAGTTTTATTTGTTGGGGAAGCATTGGTTGGTAATGATGCT GTTGATCAACTCACTAAATTTAACCAGAAATTAGCAGACCTTTCCGCTGTCCCTACTACC AGATTGATAGATGGCATCCTGCTCACCAAGTTTGACACCATCGACGACAAGGTTGGAGCT GCACTTTCAATGGTTTATATATCTGGAGCTCCAGTCATGTTCGTTGGCTGTGGTCAGTCT TACACTGACCTCAAGAAGCTCAATGTCAAATCCATCGTTAAAACCCTGCTGAAGTGAATG TGGTGCGCCGTTGTGCGGCACCTCGAATTCGTACTGCCAGTATTGCTATCGTCGAAACCC CCATGACCTCGTCGTCATCGTGTTGGATGTGTTCTGTCCTGGTTTACTGTTGTAGTAGCA CAAACTATCGTGCGCTTTTTCAGTTATGTGACTGCTTTGTATCACAGGTTTTACCTGTTT TACCCTGGAATATATACTTACTAGTGGTT