Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0480000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23712632:23717520:1 gene:Os08g0480000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0480000-01)
Sequence	ATGGAGGACGAGGCGACGTCGGTGGCGGCGCCGCTGCTGCGGCCGCGCGGCGGCGTTGAC GCGGAGGCGGTGAAGCAGCAGCTGTGGCCGGCCGGCGCGAGGGTGGCGGGGGAGTGGTGG GTGGAGTCGAAGAAGCTGTGGCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTG TACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCC GCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGCTGGGCATG GCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTG GGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCG ACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGC CTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTC CCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGC GTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGC CTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTG GTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTC GCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAG AACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCT GTGGATGCACTCTCCATATGCTTGACGATCAACGGATGGGAGATGATGATTCCTTTTGGC TTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAGCTCGGCGCCGGCAGCGGCAAGGGC GCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCCGTGGCGATCGGCCTCGTCTTCTGG TGCCTCATCATTGCCTACAACGACAAGATCGCTCTCCTCTTCTCGTCGAGCAAGGTGGTG CTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCCTTCACCGTCCTCCTCAACAGCGTG CAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGGTGGCAAGCACTCGTAGCCTACGTC AACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATCGGTGCCATATTGGGCTGGCCATTG CATTTCGGAGTTGGGGGAATTTGGTCCGGGTTGATTGGTGGCACAGCTGTTCAGACACTG ATATTAGCCTATCTCACTATCAGCTGTGATTGGGATGAAGAGGCAAAGAAAGCAAGTACA AGGATGGAAGTATGGGCCAGCTCAAAATGA

Peptide Sequence

PEP ID	Os08t0480000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23712632:23717520:1 gene:Os08g0480000 transcript:Os08t0480000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0480000-01)
Sequence	MEDEATSVAAPLLRPRGGVDAEAVKQQLWPAGARVAGEWWVESKKLWRVVGPAIFQRIAL YGINVVSQAFIGHMGDLELAAFSIASTVVAGFNFGFLLGMASALETLCGQAFGAKKYHML GVYLQRSWLVLLMFAVALTPTYVLMEDLLLLIGQPADLASLAGKMSVWLLPQHFAMAMLL PLTRFLQSQLKNWVTAVTAGVALALHLVITYLLVNTLHLGLLGAVAAANVAWWIVVLGQL VYVVGGWCPLSWKGFSMEAFADFWEFIKLSSASGVMLCLENWYYRVLVLLTGYLNNAEIA VDALSICLTINGWEMMIPFGFLAATGVRVANELGAGSGKGARFAIVVSVTTSVAIGLVFW CLIIAYNDKIALLFSSSKVVLDAVSDLSVLLAFTVLLNSVQPVLSGVAIGSGWQALVAYV NVGSYYLVGVPIGAILGWPLHFGVGGIWSGLIGGTAVQTLILAYLTISCDWDEEAKKAST RMEVWASSK

Transcript Sequence

Transcript ID	Os08t0480000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23712632:23717520:1 gene:Os08g0480000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0480000-01)
Sequence	ACCGCGCGCGCAGCACTCGCAGGAGAGGATCGAGTTAACCAAGTACGAAGCGAGTAGTTA GCGGGCGAGTACGTGGTGTTTGTCATGGAGGACGAGGCGACGTCGGTGGCGGCGCCGCTG CTGCGGCCGCGCGGCGGCGTTGACGCGGAGGCGGTGAAGCAGCAGCTGTGGCCGGCCGGC GCGAGGGTGGCGGGGGAGTGGTGGGTGGAGTCGAAGAAGCTGTGGCGCGTCGTCGGGCCG GCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGC CACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTC AACTTCGGTTTCCTGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTC GGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTC ATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATC GGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAG CACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAAC TGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTG CTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGG TGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGG AAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCC TCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGG TACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCAACGGA TGGGAGATGATGATTCCTTTTGGCTTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAG CTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCC GTGGCGATCGGCCTCGTCTTCTGGTGCCTCATCATTGCCTACAACGACAAGATCGCTCTC CTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCC TTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGG TGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATC GGTGCCATATTGGGCTGGCCATTGCATTTCGGAGTTGGGGGAATTTGGTCCGGGTTGATT GGTGGCACAGCTGTTCAGACACTGATATTAGCCTATCTCACTATCAGCTGTGATTGGGAT GAAGAGGCAAAGAAAGCAAGTACAAGGATGGAAGTATGGGCCAGCTCAAAATGAAGCAAC CAAGTACCAACAGTGTGTTGGTGAGGTTTCTTGGACACACAAAGGGGGCACTTCAGTGGG CAGCAGAAGAACCGCAACTTCTGCTCAGTACAAAGAGGCAAACCATCAGAATAGATCAAG AAGACGAGAACATTTTGGAAGGCATAGCTGGTGTTTCACATATAGACATATTCACGTTAC CTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAGAAG AGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGCCTT GTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACTATTT AATGGATATTGCAACTGCAAGCCTGTGTGTTGTTCGCGGATTGTAAGACGTCCGGACACT ACAAAATGGGCCAGACGGTAGCCCATTACCATCGTGTATGATATATATGCACCGAAACGA ATCCACTCCTACGGTCCTACCTCAC