Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0479400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23663492:23665382:-1 gene:Os08g0479400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 2 description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os08t0479400-01)
Sequence	ATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTG AGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCC AAGCCGGGAGGTGGAGTCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGG GCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGGAC GGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCGCC GCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGG CCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGCAC CACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCTCCACCACCAGCAGCACCAG ATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCC CTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGGATG GTCGGCCCCATGGTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCC GGCTCCGGCTCCGGCAAGAAGCGGTTCCGCACAAAGTTCACGCAGGAGCAGAAGGACAAG ATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTG CAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGATGCACAAC AACAAGCACACCCTGGGCAAGAAGGCGCCATAG

Peptide Sequence

PEP ID	Os08t0479400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23663492:23665382:-1 gene:Os08g0479400 transcript:Os08t0479400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 2 description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os08t0479400-01)
Sequence	MDFDDHDEGDGDEEMPPMPLSSGYDAPMQPGLGGGGGGVPKPGGGVGGGGGGGGGGGGGG ARYRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVG PAEPSAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRP LALPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLGSAGPSGSGSGKKRFRTKFTQEQKDK MLAFAERLGWRIQKHDEAAVQQFCEEVCVKRHVLKVWMHNNKHTLGKKAP

Transcript Sequence

Transcript ID	Os08t0479400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23663492:23665382:-1 gene:Os08g0479400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 2 description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os08t0479400-01)
Sequence	AAGCTTTTCTTAAGCTCGCCAAGAACACACCCGAGAAATCCAAAAGGGAGGGAAAAGAAA GGGGGTGGCCGGCCGGTCGGTCGGTCGGCGGCCATGGATTTCGACGACCATGACGAGGGT GACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAG CCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGC GGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTGCCTCAAGAAC CACGCCGTCGGCATCGGCGGGCACGCCGTGGACGGCTGCGGCGAGTTCATGGCTTCCGGC GAGGAGGGCTCCATCGACGCGCTCCGCTGCGCCGCCTGCGGCTGCCACCGTAACTTCCAC CGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGGCCGGCCGAGCCTTCCGCCGTGTCCCCC GCCGCCATCTCGGCCTACGGCGCCTCGCCGCACCACCAGTTCTCCCCCTACTACCGCACC CCGGCAGGGTACCTCCACCACCAGCAGCACCAGATGGCGGCCGCGGCGGCGGCCGCGGCC GCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCCCTCGCGCTGCCGTCCACCTCCCACTCG GGACGCGACGAGGGCGACGACATGTCCGGGATGGTCGGCCCCATGGTGATTGGCCCCATG GTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCCGGCTCCGGCTCCGGCAAGAAGCGGTTC CGCACAAAGTTCACGCAGGAGCAGAAGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGG TGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTC AAGCGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCG CCATAGCTAAGCTAAGCCAAGCAAGCTCAGCTCAGCTCATCTCCTCCCGGTGCTAGGTAC CTGCACTGCAACTGCAACTGCATGCATCACCATCTCCATCTACTTCTACTACCTCCTTAC CCGCGGCTAATTAGCCTTTTTCTTTGCCTTCTTTTACCTCACCTGAGTAGAAGCTTAGCT AGGTTCGTAGCGAGCAAGCTGTTCTTGTTGGTTTTAGGGGAGGTGGTGGTTGCTGCTGCT GCTGCTTTTGCATCCTTCCTTGTTTCTTTTTCGTTATTTTATTCCATTGTGGTTGGGTTC TTTGGGCTTGTGGTTGCCGTCGTTGTTGTTTCCTAGTAGATGATGACGACGACGTTTGGT GTTGGGAAGGAAGAGGACATGGATGGCGATTTGCCGATCGATTTAGATCTTGGGAATGTA GTACTTTTGTGTTGCAATTGAAATTTCCTTCCTGGGGATTTGGGTTGCTGCACGGTTTGT TTGTTTCATCATTTCTTTTCCCCTATATTTCTTGTGCTTGGCACTTCATCATCAGTAGCA CTTGTAGTTCGTCTAGCTAACAACTAGGGCAGATAAAGATTCAGAAAGGTCGGCTGCAAC TATATGAGCTGCAACACTGTTGCATTCACATCGATCTCCCTCGCTTCCAATTTCCAGACC TGGGCACCAACTTGTCCATGATCCGTCCGCTTCACCTGTCTACTCTGAAATTCCAATTTC TCTAGCTACCATGTTCGCTGCATTTTTCTTCCGAGTTCTCGATCTCACTGTATCCGCTGC ATTTACTCGTCTTCCACATCTCGCGAGCAGTGATGCCGCATTGCTGCCCATGTGTTAGGA CGCAGAGCTTGCAGAAGCTATAGCAATGGCCGGGGACTTTTTAGAATTTAGCCTATGTGA ATTCAATGAAGCCTCGTCCTCTCTTTTACTC