Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0478100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23576748:23579088:-1 gene:Os08g0478100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0029, N-terminal domain containing protein. (Os08t0478100-01)
Sequence	ATGGCGGCCGTGCGCATTGCCCCACGCCTCCGCTCTCTCCCGCTCCTGCTCCCCGGACCA GACGCCGCCGCCACCGCCGCCGCCGTCCACCGCAGCTGCTCCTCCTGTGGCGGTAGCTTG GCCGCGTTGGCGCCTGCCCGCCTGCGCGCCATGTCGTCGTCGTCCTCCTCCTCCTCCGTC TCCCCCTCCCCGTACACGACGCTCGTGGGTCGCGTGAGCTGCGAGCGCGAGATCAAGAAG AGCAAGTTCATCGCCATCGCCGCCCCCGTCCCCGACGAGCGCGCCGCCATGTCCTTCCTC AACGAGGTCAGTGATCCCCGTGCAACCCATAATTGCTGGGCGTATAAGCTGGGAGAGCAA TTCCGTTACAATGATGATGGTGAACCTTCAAGCACCGCTGGAAAGCCAATATACTCTGCC ATTATTTCATCTGGCATTGATATGGTCATGGTGGTGGTAATCAGATACTTTGGAGGCATA AAATTAGGAACTGGTGGGCTGGTGAGAGCTTATGGTGGGGTTGCTTCTGAATGCCTAAAA GATGCTCCTACTTGTCTTGTAAAACCAAAGGCTCGTGTGGGTATGGAGGTACCATTTGAT CTCTTGGGAACAGTCTATCATCAGTTGCAACATTACCAAGCTGAAGATATCAAACAGGAC TATGACACTGGGAAAGATGGTACTGTTATGGTCATGTTCAAATTGGAATATGAAAAAATT GAGAATCTTGGGAATGCAGTAAATTCAGCCTGCAGCAGGAAAATAGAACTACTCCTATAA

Peptide Sequence

PEP ID	Os08t0478100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23576748:23579088:-1 gene:Os08g0478100 transcript:Os08t0478100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0029, N-terminal domain containing protein. (Os08t0478100-01)
Sequence	MAAVRIAPRLRSLPLLLPGPDAAATAAAVHRSCSSCGGSLAALAPARLRAMSSSSSSSSV SPSPYTTLVGRVSCEREIKKSKFIAIAAPVPDERAAMSFLNEVSDPRATHNCWAYKLGEQ FRYNDDGEPSSTAGKPIYSAIISSGIDMVMVVVIRYFGGIKLGTGGLVRAYGGVASECLK DAPTCLVKPKARVGMEVPFDLLGTVYHQLQHYQAEDIKQDYDTGKDGTVMVMFKLEYEKI ENLGNAVNSACSRKIELLL

Transcript Sequence

Transcript ID	Os08t0478100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23576748:23579088:-1 gene:Os08g0478100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0029, N-terminal domain containing protein. (Os08t0478100-01)
Sequence	ATGGCGGCCGTGCGCATTGCCCCACGCCTCCGCTCTCTCCCGCTCCTGCTCCCCGGACCA GACGCCGCCGCCACCGCCGCCGCCGTCCACCGCAGCTGCTCCTCCTGTGGCGGTAGCTTG GCCGCGTTGGCGCCTGCCCGCCTGCGCGCCATGTCGTCGTCGTCCTCCTCCTCCTCCGTC TCCCCCTCCCCGTACACGACGCTCGTGGGTCGCGTGAGCTGCGAGCGCGAGATCAAGAAG AGCAAGTTCATCGCCATCGCCGCCCCCGTCCCCGACGAGCGCGCCGCCATGTCCTTCCTC AACGAGGTCAGTGATCCCCGTGCAACCCATAATTGCTGGGCGTATAAGCTGGGAGAGCAA TTCCGTTACAATGATGATGGTGAACCTTCAAGCACCGCTGGAAAGCCAATATACTCTGCC ATTATTTCATCTGGCATTGATATGGTCATGGTGGTGGTAATCAGATACTTTGGAGGCATA AAATTAGGAACTGGTGGGCTGGTGAGAGCTTATGGTGGGGTTGCTTCTGAATGCCTAAAA GATGCTCCTACTTGTCTTGTAAAACCAAAGGCTCGTGTGGGTATGGAGGTACCATTTGAT CTCTTGGGAACAGTCTATCATCAGTTGCAACATTACCAAGCTGAAGATATCAAACAGGAC TATGACACTGGGAAAGATGGTACTGTTATGGTCATGTTCAAATTGGAATATGAAAAAATT GAGAATCTTGGGAATGCAGTAAATTCAGCCTGCAGCAGGAAAATAGAACTACTCCTATAA GTGGAATCATAGGGTTAAGTGTGACCATGCAGATTCAATGTTCAGGTTGTGCCTACTGCA GCCTCTGTTAACCAGTGCACTACTACTACCCCTGAAATATTCAGCCTTTGACTCGACGAT AGTTCTTAGCAGCAACTTCAGATTGGAGTTCCCCAATGTAAACGGCAGAATCATGTTCTA CTGAGATTATTGATCCTCCAAACATACATATATATTAGTTTCTCATCCTGTCTACCATCT ATTGTAAGTTACCAATAATAACGTCTTAGTATTATACTCTTGTAGCATTGATATGTTGAA AGAGATGTTATGATAACTTCTCCATGATCTTTATGACCAAATTGACATTAATTTGGCTGA TCTTTTGATTCAGCTGTGTT