Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0477500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23545539:23548630:-1 gene:Os08g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II zeta description:Similar to patatin class 1. (Os08t0477500-01)
Sequence	ATGGCAAGTGCTAGCTCACCGGAAGGTGCAAGTTCGAGCTCTCCTGAAAAGGTCAAGATG GTCACCGTCCTGAGCATCGACGGCGGCGGCGTCAGAGGGATCATCCCGGCCACCATCCTC GCCTTCCTTGAGAAAGAGCTCCAAAAACTGGATGGTCCGGATGCTAGGATCGCTGACTAC TTCGACGTCGTCGCCGGCACGAGCACCGGTGGCCTCCTGACGGCGATGCTCACTGCTCCA AACGAGAACAACCGGCCACTGTTCGCCGCCGACGAATTGGCCAAATTCTACATCGAACAC TCGCCCAGCATCTTCCCACAGAAGAACTGGGTCTTGTCCAAGATCGCCGGCACGCTGAGG ATGGTGAGTGGCCCAAAGTACGACGGCAAGTACCTCCATTCGCTGCTCCGAGAGAAGCTC GGCGACACGAGGCTGGACAAGGCGCTGACGAACGTGGTTATTCCCACCTTCGACATCGCT AACCTGCAACCAACCATCTTCTCCAAATTCGAGTTGAAGTACAAGCCACTGAAGAATGCT CTCCTGTCGGACATTTCGATCAGCACCTCCGCCGCACCGACCTTCTTCCCGGCGCACTAT TTCGAGACCAAAGACGACAATGGCCAGACGAGGGAGTTCAACCTCGTCGACGGTGGGGTC GCCGCCAACAACCCGGTAAGCACCACGTGTCGCCGATGCAAACCTCAGGTTTCTTTTTTT AGGACTTTTAAGGGAATCAAACTATTTCCTGTGAAAATCCCATTCTGCAAAAGAGTCCTA ATAATACTCCCTCTGTTTCTAAATATTTGA

Peptide Sequence

PEP ID	Os08t0477500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23545539:23548630:-1 gene:Os08g0477500 transcript:Os08t0477500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II zeta description:Similar to patatin class 1. (Os08t0477500-01)
Sequence	MASASSPEGASSSSPEKVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADY FDVVAGTSTGGLLTAMLTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLR MVSGPKYDGKYLHSLLREKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNA LLSDISISTSAAPTFFPAHYFETKDDNGQTREFNLVDGGVAANNPVSTTCRRCKPQVSFF RTFKGIKLFPVKIPFCKRVLIILPLFLNI

Transcript Sequence

Transcript ID	Os08t0477500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23545539:23548630:-1 gene:Os08g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II zeta description:Similar to patatin class 1. (Os08t0477500-01)
Sequence	TCACCGCCAATCTTGCATTGTTCTTTCTTTCGTTCCATAAGTCGTTGCATCAATATTAGC CTGATTTTGAGCTATCAAAGTAGCAAAACGATGGCAAGTGCTAGCTCACCGGAAGGTGCA AGTTCGAGCTCTCCTGAAAAGGTCAAGATGGTCACCGTCCTGAGCATCGACGGCGGCGGC GTCAGAGGGATCATCCCGGCCACCATCCTCGCCTTCCTTGAGAAAGAGCTCCAAAAACTG GATGGTCCGGATGCTAGGATCGCTGACTACTTCGACGTCGTCGCCGGCACGAGCACCGGT GGCCTCCTGACGGCGATGCTCACTGCTCCAAACGAGAACAACCGGCCACTGTTCGCCGCC GACGAATTGGCCAAATTCTACATCGAACACTCGCCCAGCATCTTCCCACAGAAGAACTGG GTCTTGTCCAAGATCGCCGGCACGCTGAGGATGGTGAGTGGCCCAAAGTACGACGGCAAG TACCTCCATTCGCTGCTCCGAGAGAAGCTCGGCGACACGAGGCTGGACAAGGCGCTGACG AACGTGGTTATTCCCACCTTCGACATCGCTAACCTGCAACCAACCATCTTCTCCAAATTC GAGTTGAAGTACAAGCCACTGAAGAATGCTCTCCTGTCGGACATTTCGATCAGCACCTCC GCCGCACCGACCTTCTTCCCGGCGCACTATTTCGAGACCAAAGACGACAATGGCCAGACG AGGGAGTTCAACCTCGTCGACGGTGGGGTCGCCGCCAACAACCCGGTAAGCACCACGTGT CGCCGATGCAAACCTCAGGTTTCTTTTTTTAGGACTTTTAAGGGAATCAAACTATTTCCT GTGAAAATCCCATTCTGCAAAAGAGTCCTAATAATACTCCCTCTGTTTCTAAATATTTGA CACCATTGACTTTTTTAAATACGTTTGACCGTTCGTTTTATTAAAAAATTTAAGTAATTA TTAATTCTTTTCCTACCATTCAATTTATTGTTAAATATACTTATATGTGTACATATAGTT TTACATATTTCATAAATTTTTTTAAATACGACGAACAGTCAAACATGTGCTAAAAAATTA ACGGTGTCAAATATTTAGAGACGGAGGGAGTATATCTGTTGGAATATAATAATATATAGA CATGGAACTGTATGTGTAGACATTGTGTGCAATGAGCCAAGTGTCCAAGTATATCATCCT CGAGGACAAGGAAGATTGCGACTTCTTCCCGGTGAAGCCGACGGAGTATGGCAAGTTCAT GGTGATCTCCATCGGCTGTGGGTCGAATCACGATCAGAAATACAAGGCCAAGGACGCTGC CAAGTGGGGAATCTTCAACTGGCTCATCAAGGGTAGCTCAGCTCCCATCATCGACATGTT TACTTCTGCTAGTGCTGACATGGTTGACATCCACCTCGGTGTGCTCTTCAGCGCTCTTCA ATGCGAAAAGAACTACTTACGCATACAGTATGATCAGTTGACGGGCAGTGCGGGCTCGAT CGACGACTGCTCCAAGGAAAACATGGATAACCTGGTGAAGATTGGGGAAATGCTTCTCGA CAAGAACGTCTCACGAGTAGACCTGGAGACCGGCCATTACGTGGATGTGGCCGGCGAAGG CACGAACAGAGATCAGCTTGCCAAGTTCGCAAAGCAGCTCTCCGACGAGCGGCGCCGGCG CCAAAACGAGCCCTCAAATTAAATTGAATTAAGGAGTGATAAAAAAAATTAAAGTGATTT TACTGTTCTGCTAGGCCGTAAAATCTCTTTAAATTAAAATCTCGGTTATGTGTGATGGTC GAACTGCTTCTGATTGAATCGAATTGGTCTTCATGTGTGTGTTGGGGGTGGTTTGTTACT TTGAAACATGTTCCTCGTTCCATTTTTGTATATATCAGAAATAAAAACTTCCATTTCTCT AA