Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0476900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23491893:23494532:-1 gene:Os08g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II delta description:Similar to Patatin-like protein 1. (Os08t0476900-01)
Sequence	ATGGCGCCCGTGCAGACACCGGAGCAGAGCAACGGGTCACTGACGTTGAACCCGGTGGTG CAGCGCGTGCTGAGCCGCGGCAAGTCGCTGCTGTCGCCGTCCACGCCGCGGTCGCCGCCG CCGTCGTACGGGAGCATCGTCACCGTGCTGAGCATCGACGGCGGCGGCGTGCGCGGCATC ATCCCGGGCACCATCCTCGCGTTCCTGGAGGAGAAACTGCAGGAGCTGGACGGCCCCGAG GCTCGGCTCGCCAACTACTTCGACGTGATCGCCGGGACGAGCACCGGCGGGCTGGTGACC GCCATGCTCACCGCGCCTAACGACAACGGCGACCCGCTGTTCGCCGCCAGGGACATCAAC GACTTCTACCTCGAGCACTGCCCCAGGATCTTCCCTCCCGTCAGCAAGGGGCCTCTCGGT CTGTTCAAGAGCATGACGGGGCCCAAGTACGACGGCCGGCACCTCCACTCCGTCGTGCAG CAGCTGCTCGGCGACAAGCGCGTCGACAGCACCATCACCAACATCGTCGTCCCGACCTTC GACATCAAGCTCCTCCAGCCAACAATCTTCTCGACCTACAACGCTCGCAAGGACGTGTCC AAGAACGCGCTTCTGTCGGACGTGTGCATCAGCACGTCGGCGGCGCCGACGTACCTCCCC GGCCACCGCTTCGAGACGACGGACAAGGACGGCAAGCCCCGGGAATTTAACCTCGTCGAC GGCGGCTTCGCCGCGAACAATCCGACGCTGCTGGCGATGACACACGTAACCAAGCAGATC CTGCTGGGCTGCCAGGACTTCTTCCCGATCAAGCCGGCGGACTACGGCAAGTTCATGATC CTGTCGCTGGGCACCGGCTCGGCCAAGATCGAGAAGAAGTTCGACGCCGTCGAGAGCGGC CGGTGGGGCGTCCTCGGCTGGCTGTTCAACAAGGGCGCGACGCCGCTGATCGACAGCTTC AGCCAGGCCAGCGCCGACCTCGTCGACATCCACGCATCCGTGCTCTTCCAGGCGCTGCAC TGCGAGAAGCGCTACCTCCGCATCCAGGACGACGAGCTCACCGGCGACGCGGCGTCCGTC GACGTCTCCACGCCGGAGAACCTCCAGAGGCTCGTCGGCGTCGGCAAGGCGCTGCTCAAG AAGCAGGCGTGCAAGGTCGACCTCGAGACCGGCAAGAACGAGCCGGACATGAACCGGAAA AGTAACGAGGAGGAGCTGGTGCTTTTCGCCGAGATGCTGTCGCGAGAACGGAAGGCCAGG CTTCAGAAAAAGCAGGGGAGCATGAAGATCTAG

Peptide Sequence

PEP ID	Os08t0476900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23491893:23494532:-1 gene:Os08g0476900 transcript:Os08t0476900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II delta description:Similar to Patatin-like protein 1. (Os08t0476900-01)
Sequence	MAPVQTPEQSNGSLTLNPVVQRVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGI IPGTILAFLEEKLQELDGPEARLANYFDVIAGTSTGGLVTAMLTAPNDNGDPLFAARDIN DFYLEHCPRIFPPVSKGPLGLFKSMTGPKYDGRHLHSVVQQLLGDKRVDSTITNIVVPTF DIKLLQPTIFSTYNARKDVSKNALLSDVCISTSAAPTYLPGHRFETTDKDGKPREFNLVD GGFAANNPTLLAMTHVTKQILLGCQDFFPIKPADYGKFMILSLGTGSAKIEKKFDAVESG RWGVLGWLFNKGATPLIDSFSQASADLVDIHASVLFQALHCEKRYLRIQDDELTGDAASV DVSTPENLQRLVGVGKALLKKQACKVDLETGKNEPDMNRKSNEEELVLFAEMLSRERKAR LQKKQGSMKI

Transcript Sequence

Transcript ID	Os08t0476900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23491893:23494532:-1 gene:Os08g0476900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II delta description:Similar to Patatin-like protein 1. (Os08t0476900-01)
Sequence	ACATCGAGATCAACGATAGAGCCAAGCACAAACACGAGCTAGACGACGCTATCAGCGAAG CAGAAACACACACACACACACACAAAATCTCCCGGTGTTTTGTTTAGCACAGTCTAGTGT TTCCCATGGCGCCCGTGCAGACACCGGAGCAGAGCAACGGGTCACTGACGTTGAACCCGG TGGTGCAGCGCGTGCTGAGCCGCGGCAAGTCGCTGCTGTCGCCGTCCACGCCGCGGTCGC CGCCGCCGTCGTACGGGAGCATCGTCACCGTGCTGAGCATCGACGGCGGCGGCGTGCGCG GCATCATCCCGGGCACCATCCTCGCGTTCCTGGAGGAGAAACTGCAGGAGCTGGACGGCC CCGAGGCTCGGCTCGCCAACTACTTCGACGTGATCGCCGGGACGAGCACCGGCGGGCTGG TGACCGCCATGCTCACCGCGCCTAACGACAACGGCGACCCGCTGTTCGCCGCCAGGGACA TCAACGACTTCTACCTCGAGCACTGCCCCAGGATCTTCCCTCCCGTCAGCAAGGGGCCTC TCGGTCTGTTCAAGAGCATGACGGGGCCCAAGTACGACGGCCGGCACCTCCACTCCGTCG TGCAGCAGCTGCTCGGCGACAAGCGCGTCGACAGCACCATCACCAACATCGTCGTCCCGA CCTTCGACATCAAGCTCCTCCAGCCAACAATCTTCTCGACCTACAACGCTCGCAAGGACG TGTCCAAGAACGCGCTTCTGTCGGACGTGTGCATCAGCACGTCGGCGGCGCCGACGTACC TCCCCGGCCACCGCTTCGAGACGACGGACAAGGACGGCAAGCCCCGGGAATTTAACCTCG TCGACGGCGGCTTCGCCGCGAACAATCCGACGCTGCTGGCGATGACACACGTAACCAAGC AGATCCTGCTGGGCTGCCAGGACTTCTTCCCGATCAAGCCGGCGGACTACGGCAAGTTCA TGATCCTGTCGCTGGGCACCGGCTCGGCCAAGATCGAGAAGAAGTTCGACGCCGTCGAGA GCGGCCGGTGGGGCGTCCTCGGCTGGCTGTTCAACAAGGGCGCGACGCCGCTGATCGACA GCTTCAGCCAGGCCAGCGCCGACCTCGTCGACATCCACGCATCCGTGCTCTTCCAGGCGC TGCACTGCGAGAAGCGCTACCTCCGCATCCAGGACGACGAGCTCACCGGCGACGCGGCGT CCGTCGACGTCTCCACGCCGGAGAACCTCCAGAGGCTCGTCGGCGTCGGCAAGGCGCTGC TCAAGAAGCAGGCGTGCAAGGTCGACCTCGAGACCGGCAAGAACGAGCCGGACATGAACC GGAAAAGTAACGAGGAGGAGCTGGTGCTTTTCGCCGAGATGCTGTCGCGAGAACGGAAGG CCAGGCTTCAGAAAAAGCAGGGGAGCATGAAGATCTAGTACATATTGGCAAATTGTAGCA GATCTTCGGATCAATACTACAGGTCTACAACTACTATTGGTGTCAAGTGATTGGATGTAA AATTTATCCGTTCATATTGGATGTTTGTTGTATCTTCGTAAATTCATGTACATCTATGTA AGGAAATGATTCTAAACTCTCGAGAAGATATCTATGTGAGTAGTAATGAAAAAAAGCTTT TTACTATC