Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0475400-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:23418742:23420164:1 gene:Os08g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os08t0475400-02)
Sequence

ATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAG
TCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTC
GTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCC
AACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCCGCCGCCAAGGCCAAG
CTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCC
ACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTC
GAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCG
CTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCAC
GCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCAC
ATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTC
ATGATCCACCCCTACTTCCTCGGCACTAACAGGGTGGCCTCCGACGACCTGGACCCCGCC
GTGCGCGAGAGCCTCGGGAGCCTGTGGCGCGTCATGTGCCCGGCCACCACGGGCGAGGAC
GACCCGCTCATCAACCCGCTCGTGGACGGCGCGCCGGCGCTCGACGCGCTGGCGTGCGAC
CGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTAC
GACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAG
GGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTC
ATCAGTGGCTTCCTCAACCGTTGA

Peptide Sequence

PEP ID

Os08t0475400-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:23418742:23420164:1 gene:Os08g0475400 transcript:Os08t0475400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os08t0475400-02)
Sequence

MDAAPTAPPAASADDEIVYESMPCIRIYKNRVERYFGSEFVAASTDAATGVASHDRVISS
NVSARLYLPRLDDSAAAKAKLPVLVYYHGGGFCLGSAFNPTFHAYFNTFAALANALVVSV
EYRLAPEHPVPAAYADSWEALAWVAGHAAGDGDEAWLVDHADFSRLYLGGESAGSNIAHH
IAMRVAEEGLPHGAKIRGLVMIHPYFLGTNRVASDDLDPAVRESLGSLWRVMCPATTGED
DPLINPLVDGAPALDALACDRVLVCIGEGDVLRDRGRAYYDRLTSSGWRGEAEIWQAPEK
GHTFHLLEPHCDAAIAQDKVISGFLNR

Transcript Sequence

Transcript ID

Os08t0475400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:23418742:23420164:1 gene:Os08g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os08t0475400-02)
Sequence

ACGCGCCCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCT
TCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCC
GACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAG
CGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCC
CACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGAC
TCCGCCGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGC
CTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCC
AACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCC
TACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGAC
GAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCC
GGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGC
GCCAAGATCCGGGGCCTCGTCATGATCCACCCCTACTTCCTCGGCACTAACAGGGTGGCC
TCCGACGACCTGGACCCCGCCGTGCGCGAGAGCCTCGGGAGCCTGTGGCGCGTCATGTGC
CCGGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGCTCGTGGACGGCGCGCCGGCG
CTCGACGCGCTGGCGTGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGC
GACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAG
ATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCG
GCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGC
GATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGA
ATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTAC
TACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATG
GAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATA
AATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACAC
ATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTT